Os08g0480000
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0480000 |
|---|---|
| Description |
Multi antimicrobial extrusion protein MatE family protein |
| Version |
NM_001068591.1 GI:115476919 GeneID:4345846 |
| Length |
4889 bp |
| Definition |
Oryza sativa Japonica Group Os08g0480000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:23800637..23805525 |
| Sequence Coding Region |
23800721..23801011,23803234..23803775,23803867..23803953,23804054..23804110,23804202..23804437 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:23800637..23805525 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:23800637..23805525 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggaggacgaggcgacgtcggtggcggcgccgctgctgcggccgcgcggcggcgttgacgcggaggcggtgaagcagcagctgtggccggccggcgcgagggtggcgggggagtggtgggtggagtcgaagaagctgtggcgcgtcgtcgggccggccatcttccagcggatcgcgctgtacgggatcaacgtcgtctcgcaggcgttcatcggccacatgggcgacctcgagcttgccgccttctccatcgcctccaccgtcgtcgccggcttcaacttcggtttcctgctgggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgccaagaagtaccacatgctgggcgtgtacctgcagcggtcgtggctggtgctcctcatgttcgccgtcgcgctgacgccgacgtacgtgctcatggaggacctgctgctgctgatcgggcagccggccgacctcgccagcctcgccggcaagatgagcgtctggctgctgccgcagcacttcgccatggcgatgctgctcccgctcacgcggttcctgcagtcccagctcaagaactgggtcaccgcggtcaccgccggcgtcgcgctcgcgctccacctcgtgatcacctacctgctcgtcaacaccctccacctgggcctcctcggcgccgtcgccgccgccaacgtggcgtggtggatcgtcgtgctggggcagttggtctacgtcgtcggcggctggtgcccgctgtcgtggaagggattctccatggaagcgttcgccgacttctgggagttcatcaagctctcctcggcctccggggtgatgctttgcttggagaactggtactacagggtgttggtgttgcttacagggtacctgaataacgctgaaatcgctgtggatgcactctccatatgcttgacgatcaacggatgggagatgatgattccttttggcttcttggctgcaactggcgtgcgggtggcaaacgagctcggcgccggcagcggcaagggcgcgcggttcgccatcgtggtgtccgtcaccacctccgtggcgatcggcctcgtcttctggtgcctcatcattgcctacaacgacaagatcgctctcctcttctcgtcgagcaaggtggtgctcgacgccgtcagcgacctgtccgtgctgctcgccttcaccgtcctcctcaacagcgtgcagcccgtcctctcaggtgtggccattggctcagggtggcaagcactcgtagcctacgtcaacgtcggtagctactacttggtcggagttcccatcggtgccatattgggctggccattgcatttcggagttgggggaatttggtccgggttgattggtggcacagctgttcagacactgatattagcctatctcactatcagctgtgattgggatgaagaggcaaagaaagcaagtacaaggatggaagtatgggccagctcaaaatga</cdnaseq> |
| Protein Sequence |
<aaseq>MEDEATSVAAPLLRPRGGVDAEAVKQQLWPAGARVAGEWWVESK KLWRVVGPAIFQRIALYGINVVSQAFIGHMGDLELAAFSIASTVVAGFNFGFLLGMAS ALETLCGQAFGAKKYHMLGVYLQRSWLVLLMFAVALTPTYVLMEDLLLLIGQPADLAS LAGKMSVWLLPQHFAMAMLLPLTRFLQSQLKNWVTAVTAGVALALHLVITYLLVNTLH LGLLGAVAAANVAWWIVVLGQLVYVVGGWCPLSWKGFSMEAFADFWEFIKLSSASGVM LCLENWYYRVLVLLTGYLNNAEIAVDALSICLTINGWEMMIPFGFLAATGVRVANELG AGSGKGARFAIVVSVTTSVAIGLVFWCLIIAYNDKIALLFSSSKVVLDAVSDLSVLLA FTVLLNSVQPVLSGVAIGSGWQALVAYVNVGSYYLVGVPIGAILGWPLHFGVGGIWSG LIGGTAVQTLILAYLTISCDWDEEAKKASTRMEVWASSK</aaseq> |
| Gene Sequence |
<dnaseqindica>85..375#2598..3139#3231..3317#3418..3474#3566..3801#3913..4034#4156..4242#4331..4378#accgcgcgcgcagcactcgcaggagaggatcgagttaaccaagtacgaagcgagtagttagcgggcgagtacgtggtgtttgtcatggaggacgaggcgacgtcggtggcggcgccgctgctgcggccgcgcggcggcgttgacgcggaggcggtgaagcagcagctgtggccggccggcgcgagggtggcgggggagtggtgggtggagtcgaagaagctgtggcgcgtcgtcgggccggccatcttccagcggatcgcgctgtacgggatcaacgtcgtctcgcaggcgttcatcggccacatgggcgacctcgagcttgccgccttctccatcgcctccaccgtcgtcgccggcttcaacttcggtttcctggtatgtgctgcatgctgctttatttacgctactaccaatctcacataactttgtgcttaaactttgtctcgtatgcacttgatttggatcgagacaaaagtagttcattgcaatattcatcccggctagaattaaaatgaccagctattcggacagcttctctctgttctatcatttgattgacacaaatagaaaccgcaacgacttcatgcccaatccagctagtcatgcatgcccgctacataaatttcaagttttcatatggaaatcctgatgaaagtgtccgacagctaagcaattaacaccttgcaagaaatggctcatcagttatttgtggcaaattagctcacttcacactgttacaccgtaaattaagtagaattaatgtcagcattactgccaaaacagcagtgtctagtactagtgttttaaggactagctagacttcgtcgtctccaatttgtatgcgcgtgatcgaattatgcacgcggttgttggattgaattgaaatttattattaacctgctataattagacctccaggcacatactgtatttatttaggtaacatctggcacgggttcacagcttatcatcgaaagctctgagcccttaattcggtccatttttttttggctggaagcaataatttggtccattcaataggctctgcatcatccacacttccacagtaactttcaggtagagtagactttatgcatgaattttttaaaaaaaatatgtaaaacagtaggaggccggtcggcttcatgcatgtatctcatgcatgcacgcttgagtggatcttagagagctagcaatttatttacacggacagtagctatctgaagccgacttaggctgtatttaattcagcgtaaagtttgaattttagttaaaattggagatgatgtgactgaaaagttatgtgtttatgataggttgatgtgatgaaaaaggactgaagtttggatccaaactttggatctaaacacagccttatgaaatgccccgagagttcttttatgcgctgaggttcaggaacaatccaagaacagatggaaatagttgggtagttaatcgaggataagtgatccaatcaccctaatcatctttccttttgtaatttttgcaattaattatttgcccggcgtaaaagttctgtaatgactaatgaattaagccggaagtatcgtgtcgtagctgagcacatggattgggcgaatcaatgctctctgatcgctgtcgccttctgctgctgcagttattgttctttatgtttgtccctgtctgtgtcccgacactgacgccgccacgcacggcggccgcgaccaatctatgaccaactgcgtaggtacgaaacgacatgatctgcaattagttgagccccctctgaatgcgtcatggctcacgccatggtgatatataagctagagtaagtgctagacactgtggtttgagatagcagtaaactgttagtaagtggtgtaagtattagaacgtgtggattttaatcggatcgttgatcattacgctcctcgccaaaacggatcgaaccacctgattctaaaaacaagaccatctagggccgtgtttagtttcaatatttttcttcaaactttcaactttttcataaactttgctacacacaaactttcattttttccgtcacatcgtttcaattttaactaaactttcaattttaacgtgaattaaacacatcctagattttacagtctcgtcataagaacttacgaacacctggccgagagggaccccatcataacagctgtgtctaggattgctctaaggtcagtagaccacctagagcgtctttaattaccatatagagacgaagtaaattaaacgacaactagaatttagaacgataaaagacaagggataagagaaaaaggtaattaaacttgatagattgaatcggccatgacatgataaaataataatttggatacctgaatccgctgtgacaatttcatatttatagagtgagaaggtattacctctcgtacaagtcgaacgtaacgaatctgagaaaaatgcaaactctccgaaaccaggtcactcggcttagcaaaccatagtatccggctttctcgggatgaaaccattttggtagctcttaacagtacggtgaattatatatggtcatggtaataatcaagcaatggcgtggtggatttttggtgtttgtggttaattagctgggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgccaagaagtaccacatgctgggcgtgtacctgcagcggtcgtggctggtgctcctcatgttcgccgtcgcgctgacgccgacgtacgtgctcatggaggacctgctgctgctgatcgggcagccggccgacctcgccagcctcgccggcaagatgagcgtctggctgctgccgcagcacttcgccatggcgatgctgctcccgctcacgcggttcctgcagtcccagctcaagaactgggtcaccgcggtcaccgccggcgtcgcgctcgcgctccacctcgtgatcacctacctgctcgtcaacaccctccacctgggcctcctcggcgccgtcgccgccgccaacgtggcgtggtggatcgtcgtgctggggcagttggtctacgtcgtcggcggctggtgcccgctgtcgtggaagggattctccatggaagcgttcgccgacttctgggagttcatcaagctctcctcggcctccggggtgatgctttggtgagcacacattctcacacaactcgagcacaacaaaatatacatgaactcatcatctcggctaaattgtaatttgctcatgtatatacagcttggagaactggtactacagggtgttggtgttgcttacagggtacctgaataacgctgaaatcgctgtggatgcactctccatatggtaactagcactagcagatgattgaacatttttctccttcaaatccaaactagtcttcctcacaaattgcattgcattgtactggttcttgacttcgtagcttgacgatcaacggatgggagatgatgattccttttggcttcttggctgcaactgggtacgtgcattcctacactggtttgatcagtccatggcctgaacttgatcagcgcaccatgagtcaatgacatgagcttgaaatggcgcagcgtgcgggtggcaaacgagctcggcgccggcagcggcaagggcgcgcggttcgccatcgtggtgtccgtcaccacctccgtggcgatcggcctcgtcttctggtgcctcatcattgcctacaacgacaagatcgctctcctcttctcgtcgagcaaggtggtgctcgacgccgtcagcgacctgtccgtgctgctcgccttcaccgtcctcctcaacagcgtgcagcccgtcctctcaggcaagtccaaagcctcgttgccacaagtttcgcattgcattcatggatggaagtttggcgagccatgggtgattgattctaagctagctccctgatgcattggcattgcaggtgtggccattggctcagggtggcaagcactcgtagcctacgtcaacgtcggtagctactacttggtcggagttcccatcggtgccatattgggctggccattgcatttcggagttggggtaatgatccgaacacaccccagtacatttttattagtatgttttgggggagaagcagtaattttgttcgaatgcatggcaatgtttggattgattctgactgttcatacccaaattgcagggaatttggtccgggttgattggtggcacagctgttcagacactgatattagcctatctcactatcagctgtgattgggatgaagaggtgaactcctttatttccttcaaatttatcttgtcacaaaaatggaccagcacatttgtttgaacatatctggtgtgtttgcatgcaggcaaagaaagcaagtacaaggatggaagtatgggccagctcaaaatgaagcaaccaagtaccaacagtgtgttggtgaggtttcttggacacacaaagggggcacttcagtgggcagcagaagaaccgcaacttctgctcagtacaaagaggcaaaccatcagaatagatcaagaagacgagaacattttggaaggcatagctggtgtttcacatatagacatattcacgttaccttaggctgcagacagccagtttctgaagacgctcgtttgccaagagaacattggagaagagtgcagaggcttgcgtagggtgatagtatgtgtgagttgggattatatttattagccttgtaacctgaaatttgcactcggttgcaagttgcgacatgtaagcactgagtatactatttaatggatattgcaactgcaagcctgtgtgttgttcgcggattgtaagacgtccggacactacaaaatgggccagacggtagcccattaccatcgtgtatgatatatatgcaccgaaacgaatccactcctacggtcctacctcac</dnaseqindica> |
| External Link(s) |
