Os09g0436600

From RiceWiki
Revision as of 20:59, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0436600

Description

Conserved hypothetical protein

Version

NM_001069795.1 GI:115479332 GeneID:4347150

Length

3497 bp

Definition

Oryza sativa Japonica Group Os09g0436600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16728618..16732114

Sequence Coding Region

16730376..16730393,16730706..16731136,16731214..16731472,16731554..16731619

Expression

GEO Profiles:Os09g0436600

Genome Context

<gbrowseImage1> name=NC_008402:16728618..16732114 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:16728618..16732114 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaagcttattccaggctggaagttctttttatggagattatatcctcgattttaatgccaattgtgagagatgcgtcgtttcattgagtttttataaggacaatgatgaagagaagaaagaaacatatttcgctactggtataatttttgcttcgggaaagagatcatgctgcgttttaacaacaatagatgatgctagtaaaaggaaagatgaatcatgtgtggtaaaattttttgatggaacttcaaaaattattgattggaagagaataaaggtgcggccagagtttaaatgtgcaacaatttatatccacaatattgatatgattcatggagccaccgtcacatttagtgatcaagagattgatcattctcaaaaggtattcactgttggttacaacacaaatcaaagggacagaaccttcatctcaggaaatcttgtgaatggtgtagggatacggaacaaagacgctatcgtatttgtgcacggctgctcaactggcaattctggtcatttgggatcagctgtatttaatgaaaataaaaatcttgttggcatgaatgtttcttatactagatctagaggcactcattatatctctagcagctccacatcaacatcagattatggtggcatcgtatctgcattgaatttacaatccatacaacttgggctttccctgctatataaaaaagaaggagagactattggtgaaattgttcgtcacgtgaatgctgtcttgctcaattcagaaaaggaatgggcctaa</cdnaseq>

Protein Sequence

<aaseq>MGSLFQAGSSFYGDYILDFNANCERCVVSLSFYKDNDEEKKETY FATGIIFASGKRSCCVLTTIDDASKRKDESCVVKFFDGTSKIIDWKRIKVRPEFKCAT IYIHNIDMIHGATVTFSDQEIDHSQKVFTVGYNTNQRDRTFISGNLVNGVGIRNKDAI VFVHGCSTGNSGHLGSAVFNENKNLVGMNVSYTRSRGTHYISSSSTSTSDYGGIVSAL NLQSIQLGLSLLYKKEGETIGEIVRHVNAVLLNSEKEWA</aaseq>

Gene Sequence

<dnaseqindica>1759..1776#2089..2519#2597..2855#2937..3002#ccccgagcagagctccctccgacccgacccgaccccagcgactcggatagatccagcgccgccgcccgccgccgctgtcaaccggccggctagcccgtcctccgtcgtcaccaccgcaccggctactcgctcctatccccgcgcggctccgtctttctcaaaggtacttaccacccgcattctcttcacccttctactgtattcgattaattagggagacctgagcatgagtcacttgtgacctagtagacgggagttcactggtcccaaagattcactggtcgagagtccgagaagatgatccccaaggcgaatggagtcgcttgtgaccttagacgacgcagtggaggagcctagtgttgcggacatggaagcaccagcccggctattgttgttagactgcttgcttaacggtaggagagagagagagagagagagagagaggagtgaaagctggatttgagtggcgtgcctggtctggccgcaccatgtagaggtggggaatctggttagtaggggcacattttgtagagcaaatatggtctgatttgaaagataaatgaacaatgaaagttttaaaagaaacatttaagtccaaagtgactgattgacccaaagtgtgccatattatcaattagatccttaagaagggcaaatcctagaatggcgagttaaagagtggcatatccttgatttccctttcagttatcgtattttgcaccaaatgttgtgtattgatctggtaggactggggcatttaattttcttgttatcatggcgtagaactagacacaaggggaaattccaatggcccgccgcccgcatccctcaaagcctcttatgttgtctgcgcagttgttggctggacaaaggttcatttcacgtggctgttgttatacttaatgtattccctacccattaccttagaggattcgtccataaatttgggaaaatttaaatttttgtgctattgattgttttctctaataggatgcaagtgtgtagagtattatgtgtgcctttcgctctaaagaacaaagacaaccttggtttatctactttcaacttttcaagagacttgcaagctgttgtttttagaagttcttcgtaaaaatatatgaactactgttcttattcaataggctataactgcatgttttgcccttcttttggcagataaatatatctcttaaagttgtagttgaaatgaacactgtatacatatctaatctcttgattatgcttcaacttttgttattgtgtaatttctttttgtgccttagacatgaaaatcatattttctatgcttccagccactgcagttgacccagttactccatcatcaatccttgttgccattgctgccagttactgtttcctattccccactgcttcgtcccttttgactccaatactttggcacatcatggtcggaaaggtatgtggtaggtacaccctgttccacccttttggtctagtattttttttcatggtgttgtagaacttttgagtgggcacatcaacagaatagatagatagaaatttatttattagactcttcttttctcaagctgtggttgaaacgaacagtgtatacatcccttggctatgcttcaaacttgagcgttgtacaatttttaattcacattgtagatacgaaaagcttgtcatgtattgttctaagcaaaaatttgttacatttttaggtgttagaagcttgatctagtcatcatcaatcggatcttgtaggatattgcgatgggaagcttattccaggttaatataactccaccttttttctgttgtatttgtatattgttcttattatgcataaatcttccatgcaatatgtttcaaatcctaacaacatcaagtacaccactggtattttgtaggtttcaatcatgttgtatatctgtttatgtctatacaaaattctaatttttttccttgtaatccaaaatagtcataagcaagttgtcttttagtgttatggtacataatacttgaatgatagtgtaacaattgaaatgttaacctgtagtaaaaattatgtgtttattttgacaacccatttttaaatgctaggctggaagttctttttatggagattatatcctcgattttaatgccaattgtgagagatgcgtcgtttcattgagtttttataaggacaatgatgaagagaagaaagaaacatatttcgctactggtataatttttgcttcgggaaagagatcatgctgcgttttaacaacaatagatgatgctagtaaaaggaaagatgaatcatgtgtggtaaaattttttgatggaacttcaaaaattattgattggaagagaataaaggtgcggccagagtttaaatgtgcaacaatttatatccacaatattgatatgattcatggagccaccgtcacatttagtgatcaagagattgatcattctcaaaaggtattcactgttggttacaacacaaatcaaagggacagaaccttcatctcaggaaatcttgtgaagtaagaatctaaactttatattctttgtattactaatttttatttaagacgtgcgacttatattgagtgataaacagtggtgtagggatacggaacaaagacgctatcgtatttgtgcacggctgctcaactggcaattctggtcatttgggatcagctgtatttaatgaaaataaaaatcttgttggcatgaatgtttcttatactagatctagaggcactcattatatctctagcagctccacatcaacatcagattatggtggcatcgtatctgcattgaatttacaatccatacaacttgggctttccctgctatataaaaaagaaggagaggtatgatgcctaatttatttcaaacaaaattatttacgaacatgctcttattttttaatggttgcatcttctctttactagactattggtgaaattgttcgtcacgtgaatgctgtcttgctcaattcagaaaaggaatgggcctaagaatgtagcggaagcagctggtgttgatttagaaggtaggtttaatttttattggtaattgtttaaatcggttggtacttgttttgacatcagagctattgtacattactataatgcaggcagaagatgatgaggggcctttgatcattgttctgcagcttttctcatttttagctgctatgcgcatctgcattgatgacgagctcagaccttcaagagcaatggtgaaggccatcacgatctgagtgtctcttttttgttattattattctctatgaaaatttgatagcccaacctgtgttgatgatacaatgtgggtggtttttcttttgtaagctgacctgtgactcattttggggcacggtggtgtcagactgatgaaatgtaagtggctgttagacaggctggcctcacactgaactcggcctattttgagcttcctgtactgtctaacttttctcattattcactgcccaactttggtcagagacccgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0436600, RefSeq:Os09g0436600