Os08g0506200
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os08g0506200 |
|---|---|
| Description |
Zinc finger, CCHC-type domain containing protein |
| Version |
NM_001188720.1 GI:297726570 GeneID:9268655 |
| Length |
5593 bp |
| Definition |
Oryza sativa Japonica Group Os08g0506200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:25129250..25134842 |
| Sequence Coding Region |
25129250..25129321,25129412..25129482,25131569..25133036,25133279..25133338,25133883..25134842 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:25129250..25134842 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:25129250..25134842 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgacaactttagcaccttgtgccaaacattatacaccaaaaggcctaaccactctccttcaaaccaatcctaataacagacatactatccccaaaaccctgaaatgggatgagatcaccctgcctgagaaatgggttttatctcaagctgttgaacctaagtctatggatcagtcggaagtcgaatccttgattgaaacaccagacggagatgttgagataacatttgcttcaaaacaaaaagcctttctccagtctagaccttctgtcagtctagattctaggcctaggacaaaacctcaaaatgttgtctatgctacctatgaagacaactccgacgaaccttcaatctcagacttcgatatcaatgttatcgagcttgatgttggctttgttattgctatagaagaagatgagtttgaaattgataaagatttgcttaaaagagaactcaggcttcaaaagaaccgacccaagatgaaaagatactttgaaagggtcgatgaaccatttagactaaagataagagaactttggcataaagaaatgagagaacaaaggaagaacatctttttctttgattggtatgaaagtagccaagtcagacacttcgaagaattcttcaaaagaaaaaacatgataaaaaaagagcaaaaatccgaagcagaagatttaactgttatcaagaaggtttctacagaatgggagacagccagtggaaacaaggtagactctgttcatcctccatttgaatccgttcaattatctcataatggaggaaaagcttgtccactaaaaagtatttctaaaaatacatatggagaaacagcaaaggttgaacacataggacatttggtagaacaacaaaattatgcaaatatatctctacgttctcttggtcaacaaacaaatcgaatagagacaatccttatggaaggctacaaaacaggaagacctgagttaagagggatgatcaaggaaggccattacctgatagagatggtaatgggaatccaaccggttagaaattccctaagaaaagaagggggagggagtataaattatcactatctagatattggaaaaatcacacaaaagatacaattagtaggggctgagctttgcaatgacctaaaaatcaaagatcaactcaaaaaacaaaggattcttggtaaaagagaaatgggagatttttgctatcagtttggttttcaagatccttatgtccatagaaaaagaaaaacccattccaaacccatgacaaaaccaaatgataaaagcaagatgagctttcaagctaccaaaaggaaaccaaaaagaatttacaataagaatataagaacacaagacactgaaagcaaagaaaccatttgttacaaatgtggcttgaaaggacacatagctaacagatgtttcaaatctaaagttaaaaaagagatccaagccttgttagattcagaatcagaagacgttaaagaaaaacttgaagcaatactaaataatatagacaatgactcaagttcagatgaagaaaaaaatgcagaaattaattgttgccaagacagtggttgctcttgttgtgagccagataattcagaagaagagtctgatgaaaatatactcgttttaaccagtttagaagaatttgttctcgatacttttgaaaccattcaagatccagaagaaaaaagaagagtcctcgaaaaattcctttcaagagtcaaaactgataaggataaactaaaaaaggatattcaaaagagcaaattcctctctattgatgaagtgtttaaaaggttagatgaacagaaaaagaagaatgagcaaccagatttgatcagcctattcgaagaccaaaaaattatgaaacaagatttagaagaaataagaaagcgtctatacatgttagaatcaaaagaaggattccatatggaagaaaaggacgaaccaattcaagaagatgatcatgttgttggaaccattcaaaaatatatgaagcaaaaatggtacacagaagttatgtatcgttttatagacggatcctacttccagcatattactttaattgattctggtgctgatgtcaattgcattcgagaaggtattatccctcataaatatttctataaagccgcccacagaattcgtggggcagatggaggacttttaacagtagaatatcaaatccctgaaatctatatttgcataactgaagtttgcattaaaacatctttcctacttgttaaaaatcttaagcaagatgttattttaggaacaccatttttatcacttattcgtcctttcctagtcacaaacgaagatattcaatttaagataatgggcaaacaggtgagcctaagattttcgtctaacacagatgagattcttgaccagcttgttcagaccaaaagagaacaagttgtgaatacaatatatttacacgacaattctttcccatcatatcttccgaaatctatggacttgccagggtggcgaatcctatttagacagcctcagaagcttgcttcagatgatgtaaagtcctactcggtactcaccgcagttccacccgaagggaacacttctctacggataccgattctccagacgcctatacaagatgcaggctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MTTLAPCAKHYTPKGLTTLLQTNPNNRHTIPKTLKWDEITLPEK WVLSQAVEPKSMDQSEVESLIETPDGDVEITFASKQKAFLQSRPSVSLDSRPRTKPQN VVYATYEDNSDEPSISDFDINVIELDVGFVIAIEEDEFEIDKDLLKRELRLQKNRPKM KRYFERVDEPFRLKIRELWHKEMREQRKNIFFFDWYESSQVRHFEEFFKRKNMIKKEQ KSEAEDLTVIKKVSTEWETASGNKVDSVHPPFESVQLSHNGGKACPLKSISKNTYGET AKVEHIGHLVEQQNYANISLRSLGQQTNRIETILMEGYKTGRPELRGMIKEGHYLIEM VMGIQPVRNSLRKEGGGSINYHYLDIGKITQKIQLVGAELCNDLKIKDQLKKQRILGK REMGDFCYQFGFQDPYVHRKRKTHSKPMTKPNDKSKMSFQATKRKPKRIYNKNIRTQD TESKETICYKCGLKGHIANRCFKSKVKKEIQALLDSESEDVKEKLEAILNNIDNDSSS DEEKNAEINCCQDSGCSCCEPDNSEEESDENILVLTSLEEFVLDTFETIQDPEEKRRV LEKFLSRVKTDKDKLKKDIQKSKFLSIDEVFKRLDEQKKKNEQPDLISLFEDQKIMKQ DLEEIRKRLYMLESKEGFHMEEKDEPIQEDDHVVGTIQKYMKQKWYTEVMYRFIDGSY FQHITLIDSGADVNCIREGIIPHKYFYKAAHRIRGADGGLLTVEYQIPEIYICITEVC IKTSFLLVKNLKQDVILGTPFLSLIRPFLVTNEDIQFKIMGKQVSLRFSSNTDEILDQ LVQTKREQVVNTIYLHDNSFPSYLPKSMDLPGWRILFRQPQKLASDDVKSYSVLTAVP PEGNTSLRIPILQTPIQDAG</aaseq> |
| Gene Sequence |
<dnaseqindica>5522..5593#5361..5431#1807..3274#1505..1564#1..960#atgacaactttagcaccttgtgccaaacattatacaccaaaaggcctaaccactctccttcaaaccaatcctaataacagacatactatccccaaaaccctgaaatgggatgagatcaccctgcctgagaaatgggttttatctcaagctgttgaacctaagtctatggatcagtcggaagtcgaatccttgattgaaacaccagacggagatgttgagataacatttgcttcaaaacaaaaagcctttctccagtctagaccttctgtcagtctagattctaggcctaggacaaaacctcaaaatgttgtctatgctacctatgaagacaactccgacgaaccttcaatctcagacttcgatatcaatgttatcgagcttgatgttggctttgttattgctatagaagaagatgagtttgaaattgataaagatttgcttaaaagagaactcaggcttcaaaagaaccgacccaagatgaaaagatactttgaaagggtcgatgaaccatttagactaaagataagagaactttggcataaagaaatgagagaacaaaggaagaacatctttttctttgattggtatgaaagtagccaagtcagacacttcgaagaattcttcaaaagaaaaaacatgataaaaaaagagcaaaaatccgaagcagaagatttaactgttatcaagaaggtttctacagaatgggagacagccagtggaaacaaggtagactctgttcatcctccatttgaatccgttcaattatctcataatggaggaaaagcttgtccactaaaaagtatttctaaaaatacatatggagaaacagcaaaggttgaacacataggacatttggtagaacaacaaaattatgcaaatatatctctacgttctcttggtcaacaaacaaatcgaatagagacaatccttatggaaggctacaaaacaggaagacctgaggtaaaaataaatattccttctaattctcagtcttctagttctcagtctgttagtcctatgtttgtcccaacaattgatcctaacatcaaacttggaaaacaaaaggcttttggacccgcaatcactgaagaactagtcaatgagctagccttaaaactaaataatttaaaagtaaataaaaacatcaattagaaatatgatatggtcaacaagatttttaaaccctctactcttacttccacaactaggaattattaccctcgaccaacttatgcagacctacagtttgaggaaatgcctcagattcaaaatatgatttattacaatggcaaagaaattgtagaatggaacctagatggctttactgaatatcaaatctttactttatgtcatcaaatgattatgtatgctaatgcctgcatagctaatggaaacaaagaaagagaagctgccaatatgattgtcattgggttttctggtcaattaaaaggatggtggaataattatttaaatgaaactcaaagacaggagattctttgcgcagttaagagggatgatcaaggaaggccattacctgatagagatggtaatgggaatccaaccggtaacatttctgatgccttagccactctaatctataacataatttatcactttgccggaaactatcatgatatctatgaaaaaaatagagaacaattgataaatttaaaatgtaaaacaatgtcagattttagatggtataaagatactttcttgtcaaaactatataccctaccagaacctaatcaagacttttggaaagaaaaatatatttctggtttacctcctttatttgctgaaaaggttagaaattccctaagaaaagaagggggagggagtataaattatcactatctagatattggaaaaatcacacaaaagatacaattagtaggggctgagctttgcaatgacctaaaaatcaaagatcaactcaaaaaacaaaggattcttggtaaaagagaaatgggagatttttgctatcagtttggttttcaagatccttatgtccatagaaaaagaaaaacccattccaaacccatgacaaaaccaaatgataaaagcaagatgagctttcaagctaccaaaaggaaaccaaaaagaatttacaataagaatataagaacacaagacactgaaagcaaagaaaccatttgttacaaatgtggcttgaaaggacacatagctaacagatgtttcaaatctaaagttaaaaaagagatccaagccttgttagattcagaatcagaagacgttaaagaaaaacttgaagcaatactaaataatatagacaatgactcaagttcagatgaagaaaaaaatgcagaaattaattgttgccaagacagtggttgctcttgttgtgagccagataattcagaagaagagtctgatgaaaatatactcgttttaaccagtttagaagaatttgttctcgatacttttgaaaccattcaagatccagaagaaaaaagaagagtcctcgaaaaattcctttcaagagtcaaaactgataaggataaactaaaaaaggatattcaaaagagcaaattcctctctattgatgaagtgtttaaaaggttagatgaacagaaaaagaagaatgagcaaccagatttgatcagcctattcgaagaccaaaaaattatgaaacaagatttagaagaaataagaaagcgtctatacatgttagaatcaaaagaaggattccatatggaagaaaaggacgaaccaattcaagaagatgatcatgttgttggaaccattcaaaaatatatgaagcaaaaatggtacacagaagttatgtatcgttttatagacggatcctacttccagcatattactttaattgattctggtgctgatgtcaattgcattcgagaaggtattatccctcataaatatttctataaagccgcccacagaattcgtggggcagatggaggacttttaacagtagaatatcaaatccctgaaatctatatttgcataactgaagtttgcattaaaacatctttcctacttgttaaaaatcttaagcaagatgttattttaggaacaccatttttatcacttattcgtcctttcctagtcacaaacgaagatattcaatttaagataatgggcaaacaggtgagcctaagattttcgtctaacacagatgagattcttgaccagcttgttcagaccaaaagagaacaagttgtgaatacaatatatttacacgacaattctttcccatcatatcttccgaaatctatggacttgccaggtaagacatcatgggaagatagatatttattaaaagctactaaagatcttgaatatatatgcagggaaatggcttcacagaagtctgaatggctcacaaatatgagttcatggagactgccccaattgcccagaggccatggagaacgatttaatcacaatttcagaataacagagctacaacaagggttattaaacctcttgtggcaaacaaaaaacaaaaaagaaaaagctcatgccttaaatggcctggcatattatttcaaaaatttcgtgcccacagatcaaaagataacataaaaaagggctaaaatacaagatatccctcattatgaggagaggttactagattatcgcgaggagaaatcccgtgatggccaagataaacttcccatggaagttgaacaatctatggcaacagataagaataccaaggtattctcagataagattttaatctcaacagatcctgcttcgagcatggttgctttccacataaatatcaataacctattgcaatcttttccacataataaaccatcatcatccaccaaaaagcatgataccattccctaaacaccatacatactgcataatcatcccaattcattccttccacaatatatactccggacccagccaaaagcaccatgtagatcttgtgcctacaaagattcttgccaaaagaaacctaaaagccaaaatcccatgagtactgcatacgaaaatctccaacctagattaagcttcaaaacggagcaaactttatcctgctttgggcaagacatcctcgatcttgtttggcaaaagtttaaggagagacaaatgaaaatattccttggactccaagattatttctttgatctcttagaagggagagaaagaaacccagccatacgagtaatcatatatatgctccctctcttaaggctagatgatcaggcaatctctgacccatcctataaattcctggttctcaaagctgagataaatcttcaaagattccggaacctacccacatacaaccatgaagaaatatctctccaaaccattatagatcatggtcttgtgaattccatatatgcaaccctcgatcagatccttcaatctgatttaggaaacgctgtgaaagatgtctgcaggagacttggacatggaagatacaggattatcttctcctcaataccaccaaaattcacaccacctgttcgtccagcaattcattatatatatatatatatatatatatatatatatatatatatatcatgaatggacaatttaattttcaagaagacggtcctagcaaactatcggacgaagaggaagaaatatatacaacaattgctaatcatgaaaattggagattattttctgaagctgcagaaattgaagaagctatcaccacagattatgaatatcagctggttttccaaaacaaaatcacaaggatttttatcagcaaattctacaaccaaagttctgaatactttaagggagcaggacgcataattaaaccggattttggaaatgaatgctccaagaaaagttactacagaagcctggctcagtggtttcagaaaacagctctggcccagggcagtgactaggggtctagtcaccagatatgaggatagaaatgcttatctatatgcaatcttggatgtgagattagtatgtgacaattggatggcaatccaggttgttaaattttttttatattattatgcaaacataaatgcagtacaggaaataaagatgtaaatacaaattatgtattagatatttagaacataataggtttatatagaacggtccaggtgttcattcatataccttgataggttgaaggtagttccttctgaagattacaccaaggacttggtacaacacgttcgtaattatataggtacaggactctcacaaagactcttacatagactctcacacttagactctcaaaaacactatttattcggctgaatactattcagtttactattcaaaaacactattcagtttactgtttaaattactgttcaatgctgttcacttcgagagatattttaactttaggatctttgcagggtggcgaatcctatttagacagcctcagaagcttgcttcagatgatgtaaagtcctactcggtactcaccgtatgcctcacctatctgtctttttagaagcaacttaaaaagatattccaagtcacacttgttctagctaagagtttatcgtctccccaggcagttccacccgaagggaacacttctctacggataccgattctccagacgcctatacaagatgcaggctaa</dnaseqindica> 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