Os08g0526500
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0526500 |
|---|---|
| Description |
Similar to SOX-1 protein |
| Version |
NM_001068834.1 GI:115477406 GeneID:4346098 |
| Length |
3332 bp |
| Definition |
Oryza sativa Japonica Group Os08g0526500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:26286226..26289557 |
| Sequence Coding Region |
26286309..26286448,26287141..26287208,26287310..26287602,26287983..26288055,26288138..26288202 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:26286226..26289557 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:26286226..26289557 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtactccgatagtgtctccgggcggaagcgctccgtcatggaccgcctcggatcgggcggcggtggcggtggcggtggcggtggcggtggcggtggaggcggcggaggctctcgcccgcggcctgactccgtgaagaggtttcgtcaggcagatgggacttggagacgtgaactttatatggactctgtgggagttcaaagttcatctggagttccttccagaaatatccaaggaaaccagaaaccacatttgcagcaaaacactcaggttatgaggaaatcatcagttccagatcttcgtgaaaaattgtctggagttcagcggcctcagttgaatagtactgtacagatcccaaagtctgtaccggagatatcaacgagcgctaaacctgttcaaaagagggaacctgtccaaaagagggaaccccctgttaatgcggcccttcctgctactaagaaagtgaacgaaccatctgcaccaaagcaatgccaggaaaagactgattcctctcttgatagattactgaagtctcttgatgtagagaagtactcaataaattttcaggctgaagaggttgatatgaaggctctgcttcacatgaatgaggaagacatgaagtctttaggaattccaatggggcctcggaaaaagatattgtcagcattggcttccaagaagaagaaattatcaaaatcattacctaccagttga</cdnaseq> |
| Protein Sequence |
<aaseq>MYSDSVSGRKRSVMDRLGSGGGGGGGGGGGGGGGGGGSRPRPDS VKRFRQADGTWRRELYMDSVGVQSSSGVPSRNIQGNQKPHLQQNTQVMRKSSVPDLRE KLSGVQRPQLNSTVQIPKSVPEISTSAKPVQKREPVQKREPPVNAALPATKKVNEPSA PKQCQEKTDSSLDRLLKSLDVEKYSINFQAEEVDMKALLHMNEEDMKSLGIPMGPRKK ILSALASKKKKLSKSLPTS</aaseq> |
| Gene Sequence |
<dnaseqindica>84..223#916..983#1085..1377#1758..1830#1913..1977#2932..3006#attccgcctcctccggcctctccaccgctgcccccctcgccgccgacgaaaaccctagcggcatcgcctccgccgccgccgcgatgtactccgatagtgtctccgggcggaagcgctccgtcatggaccgcctcggatcgggcggcggtggcggtggcggtggcggtggcggtggcggtggaggcggcggaggctctcgcccgcggcctgactccgtgaagaggtgcgacttcgagctcgctataggctcaaatcgtcgcttgctttttgtctctgtacatgcgctgctagatgttacgggcttgcgactcgtggttggatcgtatggggatcgaggtgggtttgggaaatgccgcttagggcgtggaaattagggagttcgtggcttcgtgcgtggtgattgtagctttagggcgcacttaaatgagcattttgcatgttgattccaggttgacccacttagaggggagacatgtggttgcgaccagcggattgattagtcagactgagaggaaaatgtgtttatttttgtcttactgcaaatgtgatagccagtgacctggttagaatactgcatttgctttaaattcgttttgaaactgtggagagtgtagcattttggacagccgtgtcgtctgttgttgctgcagctaacctttatcactatctgccagtctatatgcatgcacgccttggtatagttactatagtattgtcacttttcttgtgttgtctttagttatcgcatcattaagtcatgtttaaattgctgcatcactgcagtgtttccacctgatgtgtaagattcacaaatggttggtatgatcggttggtttatatgttcccagattaattgtgagcacagaagcaaacacaatcctattgcttatatcttctactttgtggtttggacaggtttcgtcaggcagatgggacttggagacgtgaactttatatggactctgtgggagttcaaagttcatgtaagggacattcatagtatattttctaaacatacaattcatttttgcttcctgcatgatgatttaccattactgtattactttcgttttgcacggtgaagctggagttccttccagaaatatccaaggaaaccagaaaccacatttgcagcaaaacactcaggttatgaggaaatcatcagttccagatcttcgtgaaaaattgtctggagttcagcggcctcagttgaatagtactgtacagatcccaaagtctgtaccggagatatcaacgagcgctaaacctgttcaaaagagggaacctgtccaaaagagggaaccccctgttaatgcggcccttcctgctactaagaaagtgaacgaaccatctgcaccaaagcaatgccaggaaaaggtggtgacactgtcatattatcttctcacaaactctcgtcctgatcaactaatatgctttcatatttgttctagactaatgggacaataatgtatcattatgctacatcccttttatgtatttcgcgtgtgtaatgatgtgatggtggtgttcttgagcatttaatgtttctccaacctttattctgaattattgtctttttgtatataatcttatctatgtttaatctgcttgactgcttgttaaaaaatacaaacttcatctgcatagtattgtaccaatgtaattatctgtccagatgcttttatgattactttgggtttcatcattaaatattatcagttgaacattttaataatgtgtttgtttaaaatgtgcagactgattcctctcttgatagattactgaagtctcttgatgtagagaagtactcaataaattttcaggctgaagaggcatgtttgacttatttgggtattcaagtttttcatgtgttactagcctactacattttgttaatgcttaatcatttttcaggttgatatgaaggctctgcttcacatgaatgaggaagacatgaagtctttaggaattccaatggtactgtacgaatttggattggaactttgttttacatgcaggagctagtccattctttattattatttttttttcaaatgagtgtctagatgcctctgtattgccacctttcctactgtcataattttaaatatgcaagttggtagagcaggtttaagttatataacttccctgaagagtgaggattaacttgatttaatcccctattctcctgtgtgtttgggtgagctggggtggggctaggggttgtcttgcagaattattactaagatgtttcaaattatttagaattatgatgcattctttataagctacctgtctctcttttgacatcttgttagatagtataatctagatcggttactaatccaaatttctagtagcttttaatagagttaaatgatgattctctaaaatgaatgaagtggtataagtactgtcatatgtgcctttgtgtaccttttgcatctttcagattttatcctagggtttagtgttccactaatgatatttcatagatgacatgcgtctggttgcagacaaagcaagtacaagtggttatctcctgtgtgttatttccccctgttttcttttgtatatatagctaagtattccttcactttggttttttattatttcgtaaaaacttcataaatgttggctttgctaactgcctataagctctaaaatttagcaattccggtgtgcccttggtagatgcatgtcggtgatctttcttgtctatggtatgcgtgcatgccgtaacgaaactgaacaattgctagagtgtccattgtgtactagtgtacaactatccttccgattgcaatctacttacatatatttatttttcaagtttgtcagcctttatgagtagcgatatcattgagttttgcagcattatatgccttgattttgtgtccatatttattagatatcttgatttgttttcaggggcctcggaaaaagatattgtcagcattggcttccaagaagaagaaattatcaaaatcattacctaccagttgaatagttgatgcatctttaaacgtagtagctagatgacatgttgatttggatgtgtgcactgccaggatcaacccaagtaaccccatttcttgtataagatttccatcgagatgatgtacaaatagagaactgtgatctagcagtgctgttgtgaggcaattaacagcttgtcaataggagttatgttctgatattatgcggatatttagatgccaacatatgatgcatcggaattattttcccgtatcatgtaaacccagcccattattagcgtgcacagctagggagataaggagattttatttgtatcggcttttgggggtttc</dnaseqindica> |
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