Os08g0529000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0529000 |
|---|---|
| Description |
Similar to Auxin efflux carrier component 1 (PIN-FORMED protein) (AtPIN1) |
| Version |
NM_001068852.1 GI:115477442 GeneID:4346116 |
| Length |
3787 bp |
| Definition |
Oryza sativa Japonica Group Os08g0529000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:26419944..26423730 |
| Sequence Coding Region |
26420328..26420397,26420562..26420638,26422046..26422203,26422680..26422765,26422882..26423603 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:26419944..26423730 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:26419944..26423730 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgataggatggggagatgtgtacaaggtggtgggggcaatggcgccgctgtacttcgcgctggggctagggtacgggtcggtgaggtggtggaggttcttcacggcggagcagtgcgccgccatcaacaccatggtggtctacttctccatgcccttcttcaccttcgacttcgtcgtccgcaccgacccgttcgccatgaactaccgcgtcatcgccgccgacgcggtgtccaaggcgatcgccatcgccgccatggcggcgtgggcgcgcacgcgctgcggctgcgccgccgccaaggccggggcgcagtcgtggtccatcaccgggttctccctcgccgcgctcaacaacacgctcgtcgtcggcgtgccgctgctcgacgccatgtacgggaggtgggcgcaggacctcgtggtgcagatcgccgtcgtgcagtccatggtgtggttcccgctcctgctcatggcgttcgagctccgcaaggcctgggtcgtcggcggcggcggcggcgtcgggccggcggtgatgtcgtcgtcgtcgccgccggagaagcagagcgacgtcgagatgaacggcgccgtcgtcgcggcgccgggcggcggcggcggcgtccggctaccgttctgggcgacggcgaggacggtggggctgaagctggcgaggaacccgaacgtgtacgccagcgttctcggcgtcgtgtgggcgtgcatcgcgtacaggtggcacctgagcttgccggggatcgtgacggggtcgctgcaggtgatgtccaggactggcacggggatgtccatgttcagcatggggttgttcatggggcagcaggagagggtgatagcgtgcggggcggggctgacggcgctggggatggcgctgcggttcgtcgccggtccgctcgccacgctcgtcggcgccgccgccctcggcctccgcggcgacgtcctgcacctcgccatcatacaggccgcactgcctcaatcgattgcttccttcgttttcgcaaaggagtatgggcttcatgccgatgtactcagcacggcggttatattcggaacattgatctctctgccgattctgattgcatattacgcggttctgggctttgtctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MIGWGDVYKVVGAMAPLYFALGLGYGSVRWWRFFTAEQCAAINT MVVYFSMPFFTFDFVVRTDPFAMNYRVIAADAVSKAIAIAAMAAWARTRCGCAAAKAG AQSWSITGFSLAALNNTLVVGVPLLDAMYGRWAQDLVVQIAVVQSMVWFPLLLMAFEL RKAWVVGGGGGVGPAVMSSSSPPEKQSDVEMNGAVVAAPGGGGGVRLPFWATARTVGL KLARNPNVYASVLGVVWACIAYRWHLSLPGIVTGSLQVMSRTGTGMSMFSMGLFMGQQ ERVIACGAGLTALGMALRFVAGPLATLVGAAALGLRGDVLHLAIIQAALPQSIASFVF AKEYGLHADVLSTAVIFGTLISLPILIAYYAVLGFV</aaseq> |
| Gene Sequence |
<dnaseqindica>3334..3403#3093..3169#1528..1685#966..1051#128..849#atgaattcccagttcagagtttcaggtactctcaatctgaaacatatagaggagctagtagcaaagagaagtaattagagtgagcttaagtagtaattaattagaggaggttaattaattagggaagatgataggatggggagatgtgtacaaggtggtgggggcaatggcgccgctgtacttcgcgctggggctagggtacgggtcggtgaggtggtggaggttcttcacggcggagcagtgcgccgccatcaacaccatggtggtctacttctccatgcccttcttcaccttcgacttcgtcgtccgcaccgacccgttcgccatgaactaccgcgtcatcgccgccgacgcggtgtccaaggcgatcgccatcgccgccatggcggcgtgggcgcgcacgcgctgcggctgcgccgccgccaaggccggggcgcagtcgtggtccatcaccgggttctccctcgccgcgctcaacaacacgctcgtcgtcggcgtgccgctgctcgacgccatgtacgggaggtgggcgcaggacctcgtggtgcagatcgccgtcgtgcagtccatggtgtggttcccgctcctgctcatggcgttcgagctccgcaaggcctgggtcgtcggcggcggcggcggcgtcgggccggcggtgatgtcgtcgtcgtcgccgccggagaagcagagcgacgtcgagatgaacggcgccgtcgtcgcggcgccgggcggcggcggcggcgtccggctaccgttctgggcgacggcgaggacggtggggctgaagctggcgaggaacccgaacgtgtacgccagcgttctcggcgtcgtgtgggcgtgcatcgcgtacaggtatatacgcgtcagccatgcattgcatgcgccatcgccatcgccatcgccgtgaagtgaaactcaagtttctactagcttcttgacgtcgccgtcgccggtgaacatgcatgcaggtggcacctgagcttgccggggatcgtgacggggtcgctgcaggtgatgtccaggactggcacggggatgtccatgttcagcatgggtaagctagcatcggcataaagtttttctttttctgaatagccgaataattttgcgttataaagttggaaaataggtttaaagctgttgcaaaaatcgcaccatttaggaggccagttgcagggttcaaaatcccgataccagatcgaagtccactcacgggcggtttctttggatttcacataatccataaaaagggataaaaactgatgaaatccgaataaattttaccaaaagaattaaaacttagtttaatttttttaaaacttagatcgaaaaaccgagcggtatgtgttttcgacccagttcgaaaagttcagatttcacgtaattcgaactagattctactggatttatgtttgatgattcaagttgttagagaaatgttgttgcaataatggttgttgttgcatatgctgaataattgctgatggatatcatatgtagtgattggatatgatatatgatgagatgcagggttgttcatggggcagcaggagagggtgatagcgtgcggggcggggctgacggcgctggggatggcgctgcggttcgtcgccggtccgctcgccacgctcgtcggcgccgccgccctcggcctccgcggcgacgtcctgcacctcgccatcatacaggtacacctccttaattttgccttgtcgggaacacaaactgttcacgtcacatcgccggcgcttttcgccgtgtacttagatacatgcaggggaaagtgatttcgtgtacacaatttagcttgatagactaatataaaatataccactccacaaatatacaaattgaattttttttatttacaagttgtaaaaaaacaaatatagatgcggatgtacgataaatattttaagtttaatttgttttttttctaatttgtaaaagtcgaatttagtcttgtttgtcttgaaatgatatattttatattaatctatattattaatttttttataactatttagatgatatgaaaaaacaacgagatattttctcgacagtggtaatttagtttcgccttttgctttcactagtttatctcttctccgatctcaattaaataaactatatatatccggcttcctagagaaaacaaatgagctcgagaggtcggcagctagtgcatgctaactgcagatcacttcgatttgtcgcttttctgaaactcttgtttcgtgctaaccagtgagcaactaagcaacttggtgagtggtatatacgtacccaacttttcacattggggatgtgtatgtgtagtgcatcagcagcagtaaacgaactagctagtgtgccatgcatgcatggatacaccagataagtcacaagtatatatcgtggcttgcatttcaggagtttggaaattttcaaaaatcagtcatcactctcttcttgtccatatattggatgatattttcaatggttctcatctcccctgtattactaatttaaacaaagttaatcccttctttagataaaatgataaaaggttgaacaataaattattctaactgataaaaataatacaaaattacattttcttttactgtaatgcaaaattacatttataattcaatataacaccgagattccagataaattaaactaaaattgcacatcgcataacaatgcaattttaggctttagcaatgtgtaattgcaagcgacaaattttaacgcccctgaaatctaacaaatatgtaaggtgcttaaagttttaaaatttcagccacctttttcatctcttaaatgataatcctcatcactcctaagtcactactccttaaaagaggtttaatactcctacttctttgaacttttttaaaatgatgtaaactatttttttctttttcgaaatggcttgtgggttcatgacttcattctactccatatatatggtgaaatttaactgctagtgctaaaaagagaggtatttagaggttctatgcatacacacgcatgtataagacattagcatgcattccgatcttaattaatactgatcatgtaatcaattttcatgtacatatatgcaggccgcactgcctcaatcgattgcttccttcgttttcgcaaaggagtatgggcttcatgccgatgtactcagcacggcgtaagttaattaattttcattaatttagtatcaacctgatgattaattatgccgtacgagttttccttaactgcgttggattatagattaattacagtatcagtctgccgttgaagtactaataacttgattaatcactaacgaaaatctaattttgaatgcagggttatattcggaacattgatctctctgccgattctgattgcatattacgcggttctgggctttgtctaacatgcatttacagcacggcatgcttacttatattagatttgcttcggtccaacaaaaattatctcgagataccgatacctcacggtaccgataactcatctgctcagctagatccaacgatcgaaaataatttggtaccgtgaggtaccggtatttcgagatactttttgttggacgataacaaacctctaattacattggatgctgagatctaaaccaatgtggagcgtcaatgacgcaacagaaggatgttaattaatcagagtacttcagcaatagagagtttcagtgttgcaagctctgattaatgatctaatattccaattagtcgatattgtatttcgagcaaagtaaataataaagttttcaacagttttgctacct</dnaseqindica> |
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