Os08g0550100
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0550100 |
|---|---|
| Description |
Similar to 26S proteasome subunit RPN3a |
| Version |
NM_001068979.1 GI:115477696 GeneID:4346252 |
| Length |
3500 bp |
| Definition |
Oryza sativa Japonica Group Os08g0550100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:27676541..27680040 |
| Sequence Coding Region |
27676713..27677225,27677301..27677540,27677774..27677884,27677979..27678033,27678127..27678263 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:27676541..27680040 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:27676541..27680040 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgacggacgtgcagatgagcgactccgagccgcaggcggcgcctcccgcggcgccggcggcctccgccctccaccatctgaaggagatcgcctcggtgatcgaggccggctcgctgtccaaggaggtgcgccggatctcccgcgccgtccgcctcaccgtcgccctccgccgccgcctcgccgcccgcgacgtctccgccttcctcgccttcgcgctcccgccttcctccgaggcctacacccgcctcacctccctcgtccccaaggaagatgacactgagatggacattgacatggcagctccagcaactcagatttcgatcaagcatggcctccctgagattgaaatatattgctatttgcttgtcctgatttttcttattgaccagaagaaatacgacgatgctaaagcatgtgcaaatgcaagcattgctcgtctgaaaaacttgaacaggagaactgttgatgttctggcatctagactgtacttctattactcatatgtgcatgaactcaccaacagccttgctgaaatccgtgggaatctgctagccttacacagaatggcaactcttcaccgcgatgaacttggccaggaaactttgctcaacctgcttcttcgcaattacctccattataatttgtatgatcaagcagagaaacttaggtcaaaagctcctcgttttgaagcccactccaatcaacaattctgtcgatacctgttctacttgggtaaaatcaggacaattcagttggagtacactgatgctaaggaaagccttctgcaagctgctcggaaggcacccattacagctcgtggctttcgtattcagtgcaacaaatgggctattatagtgagactacttctcggagagattccagagaggactgtgttcatgcagaagggaatgaaggaagcactgacaccctacttcgagcttacaaatgctgtcaggatcggtgatcttgaattgtttagggctgtcgccgacaaatttgtgagcacttttagtgctgacaggactcgcaatttgattgtgagattgcgccacaatgttattcgaaccggactgcgcaatattagcatttcatactcacggatctcccttgctgatattgccaagaagctaaggctcgactctgataatcctgttgctgatgcggagagcattgtagccaaggcaataagggatggcgcaattgatgccaccatagatcatgccaacggctggatggtgtcgaaagaaactggcgatgtctactcgacaaatgaaccacagattgcattcaactctcggattgcattttgcctcaacatgcacaatgaagctgtgaaagcaatgcggttccccccgaactctcacaaggaaaaggaaagtgcggagaagcgccgtgagaggctccaacaggaggaggagctggcaaaacacatggctgaggaagatgacgatgatttttag</cdnaseq> |
| Protein Sequence |
<aaseq>MTDVQMSDSEPQAAPPAAPAASALHHLKEIASVIEAGSLSKEVR RISRAVRLTVALRRRLAARDVSAFLAFALPPSSEAYTRLTSLVPKEDDTEMDIDMAAP ATQISIKHGLPEIEIYCYLLVLIFLIDQKKYDDAKACANASIARLKNLNRRTVDVLAS RLYFYYSYVHELTNSLAEIRGNLLALHRMATLHRDELGQETLLNLLLRNYLHYNLYDQ AEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPITARGFR IQCNKWAIIVRLLLGEIPERTVFMQKGMKEALTPYFELTNAVRIGDLELFRAVADKFV STFSADRTRNLIVRLRHNVIRTGLRNISISYSRISLADIAKKLRLDSDNPVADAESIV AKAIRDGAIDATIDHANGWMVSKETGDVYSTNEPQIAFNSRIAFCLNMHNEAVKAMRF PPNSHKEKESAEKRRERLQQEEELAKHMAEEDDDDF</aaseq> |
| Gene Sequence |
<dnaseqindica>2816..3328#2501..2740#2157..2267#2008..2062#1778..1914#1565..1702#225..415#62..137#aagggaaggggagcgaccttcttgaggcagaagtcacgaaccaaccagcgccgccgccgcgatgacggacgtgcagatgagcgactccgagccgcaggcggcgcctcccgcggcgccggcggcctccgccctccaccgtaagcggtcctcccccatcccccagaaaccctcgggtggaattcctcagatttgtttctgatgtggttgcgcgctgttcgtcccagatctgaaggagatcgcctcggtgatcgaggccggctcgctgtccaaggaggtgcgccggatctcccgcgccgtccgcctcaccgtcgccctccgccgccgcctcgccgcccgcgacgtctccgccttcctcgccttcgcgctcccgccttcctccgaggcctacacccgcctcacctccctcgtccccaaggtgaattacttctcatgcgttcttcttctgttactagtataactcagcgtaagagcaacttaatattccatgtgatgcaactaaactatcagtgtttagatatagttgttggcatggataaacttactagacatgcttgcatgatgtgtgtgattctggaaagtttcccgttggtaagtaggtacctctgacaaaatttccagcactgagatatttgcattgagttggtttaatttaacatagtgatcagtaattctgtgtggatctgggttttctatggcaaaactggaatttccaaaccttggtacctgtgatgctaactgtggatatttgatttatcatcactgcattatcaaccgctctgtagttattttggaattctttctttaaataagctaatcatatggttaaaattttaaattaactggtaaacaggaattttgggtgggtgtggtcttatttttgttgttatcaaaactggaattattccattggtactactgatgtaattcatagatgcttgttatttgatttatcactgtggtgtttgactttctcatggctgttttggatcgcctgtgtctgtcattccatgattagcaacctaaatcgctgaacatatagcatgggtcattttctttcatctcttgataggaagcacttgcaaatagaggttaagtgagctccttcactgcgcacttcgactttcaaaaagatcatattttcatgtatcgtatatttgcaacgttgttcattatcgttatgttatttctgcatgtttatgctgaaatctatttttagaacatattagaaagctattcctagaagtctagagctgtaacgttaagccttatttagcagtatctctatgatacccaagaaattgattaccagtatgagatactgcactctacttgtttttttttttttcatttgtgatgactctgttatatgaagaacataatatgctgttgcactatggtcggcgtagtttctgtttttgctacttgttttgtaatttagggctcaggacctggaagcctaactttgttgtttcattgtgtatacaatgatataataaggagagtaaggtaaaacatactgttatcatatgcacggtgtctgatgtccttatttgttgctttttaggaagatgacactgagatggacattgacatggcagctccagcaactcagatttcgatcaagcatggcctccctgagattgaaatatattgctatttgcttgtcctgatttttcttattgaccagaagaaatacgacgatgtacgtctaagactactgattttatcttctgctctcagtgagacattctaatttaaagttctcacctgtctctaggctaaagcatgtgcaaatgcaagcattgctcgtctgaaaaacttgaacaggagaactgttgatgttctggcatctagactgtacttctattactcatatgtgcatgaactcaccaacagccttgctgaaatccgtgggtacgtcaaggtcttatttaatgcttagttgctcactattcagtgtcttactaccatgtttatcgacttttcctgcatttactctcttttcaggaatctgctagccttacacagaatggcaactcttcaccgcgatgaacttggccaggtagttttggtttctatatcctcattgatttattaacctttaagtcatctaattcttgtaatctgtgtaaatatacctgttttcttgattgcaggaaactttgctcaacctgcttcttcgcaattacctccattataatttgtatgatcaagcagagaaacttaggtcaaaagctcctcgttttgaagcccactccaatcaacaagtatatatctgcttgcaccatttattactctacagcttgtgaatttattgtgttttggatgttgctcatgcgaagtttcatactccacttaaatttgtttctacatgttgttgttaagacaccttcattttagttaatgctttatgattattgaagtatgagatcatccttcagccaactgaattcacaggacagactcttgggcatatgctaataagtgccttttattgcagttctgtcgatacctgttctacttgggtaaaatcaggacaattcagttggagtacactgatgctaaggaaagccttctgcaagctgctcggaaggcacccattacagctcgtggctttcgtattcagtgcaacaaatgggctattatagtgagactacttctcggagagattccagagaggactgtgttcatgcagaagggaatgaaggaagcactgacaccctacttcgagcttacaaatgtaagtaactagactttcctgaaatactgtgttgcataggtggaaaactcagactgacttatttgtggtctctaggctgtcaggatcggtgatcttgaattgtttagggctgtcgccgacaaatttgtgagcacttttagtgctgacaggactcgcaatttgattgtgagattgcgccacaatgttattcgaaccggactgcgcaatattagcatttcatactcacggatctcccttgctgatattgccaagaagctaaggctcgactctgataatcctgttgctgatgcggagagcattgtagccaaggcaataagggatggcgcaattgatgccaccatagatcatgccaacggctggatggtgtcgaaagaaactggcgatgtctactcgacaaatgaaccacagattgcattcaactctcggattgcattttgcctcaacatgcacaatgaagctgtgaaagcaatgcggttccccccgaactctcacaaggaaaaggaaagtgcggagaagcgccgtgagaggctccaacaggaggaggagctggcaaaacacatggctgaggaagatgacgatgatttttagactggctggccacttctttggcactttgggctgccaaattgcaatgttgagttggttgatctgagagaccgtaacacacctatacatgccactcacaaatgatatttgagtcatgcaaaaaccctttgcttcatctgccggaaatttatgtcgatgagaaatttatgactcc</dnaseqindica> |
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