Os08g0556000
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os08g0556000 |
|---|---|
| Description |
Similar to YTH domain protein 2 (High-glucose-regulated protein 8) (NY-REN-2 antigen) (CLL-associated antigen KW-14) |
| Version |
NM_001069007.1 GI:115477752 GeneID:4346283 |
| Length |
5259 bp |
| Definition |
Oryza sativa Japonica Group Os08g0556000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:27913040..27918298 |
| Sequence Coding Region |
27913518..27913865,27913990..27914202,27914326..27914844,27915486..27915604,27915704..27916010 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:27913040..27918298 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:27913040..27918298 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggaatcggcgcacggcggatcggatcgcccaggctcaatggattcgcaggagccaagagttgatgctgaacaaaaacctgttctttctgataaccctgaagagcagaccattcctagcaaagatgagaaggtccttgaacccaccatttcacacgattcaaatggtatcaatctaccaagtgaaggacaagcccaagctggcacttccaatataggtgggggacacaatgctgcatatcctcaaaccatgtattcttctcaggcacagccattctattaccaaggtccaggatatgataacccttcaaatgaatgggatggatatcctccttatgtgagtgttgaaggcttggaagcaggtccagcggttgtatacaatgatgatcctcaattgatgtaccatggtggctatggctatgacccttatgctcattattctcctatctcaacgcctgtaccggctgctgttagtggagatggtcagctctactctcctcagcagttctccttctcggctccttactaccagcaatcagtaccacctggcatgccatatttaagctctcctactccaatatcacagggtgaggcaatggtgccgattgacccaacacaaggggcttttatcgccgaaactctgagtcctaacagcttccttttcggaccaagacctgaatggttccgatcgtctgaaggaaatgggtcgtttccatcacctgcggcttcacctcaacctgctggtggcgtttcagggccctttggacaaagcaacttccctatggcttctggaatgcaatctcctcagcacaggcccttctatggttttgggacaccaagtgactcttacggaagagtgttctctcatggtggatatttcccacaggccactaattatgggggccctttccctagctttggcctgaatggtacgagttctattccgatggaaaaaggccgcaggagaggaaggggcaatgctcttctttgcagctgcaatggttcacttgacttcctcaatgagcaaagccgaggcccacgtgccactaggcctaagaagcaaccagaggatggcggcaaggatgagaagccttctgcaggcgttgattgcgagttgtacaacaggcctgactttgttacagagtacaagaatgccagatttttcatcataaaatcatacagcgaagacaatgtgcacaagagcatcaaatatggtgtttgggctagcaccacaaacgggaacaagaaactagactcagcctaccgtgaagcaaaggagaaagaagagcattgcccaatttttctgctgttttcggtgaatgctagtgcacaattctgtggtgttgcagagatgattgggccagtggattttgagaagagtgttgactattggcagcaagataagtggactggccagttccctgttaagtggcacattgtgaaggatgttccaaataatcttttccgccatataattcttgaaaacaatgataataaacctgtgaccaacagccgggacacacaagaggtaaaactcgaacaaggtatggagatgctgaaaatcttcaaggatcatgaggaggatgcatcgatactcgatgactttgacttctacgaggagcgtgagagagccctgctggacaataaggcgcggctgcatcagcaacatcagctgcccagctctactgtggttgagcccaagaagcccttgactgtggccactgatctagttggtcatataactaagagctttgcgcaggcagttcggcttggtgaggccaagaatgtgagccctaattcagctgacaaaggtgccagtggggattcatctgtcgctgcaaagcctttggaagttaaagaggccggcttagcataa</cdnaseq> |
| Protein Sequence |
<aaseq>MESAHGGSDRPGSMDSQEPRVDAEQKPVLSDNPEEQTIPSKDEK VLEPTISHDSNGINLPSEGQAQAGTSNIGGGHNAAYPQTMYSSQAQPFYYQGPGYDNP SNEWDGYPPYVSVEGLEAGPAVVYNDDPQLMYHGGYGYDPYAHYSPISTPVPAAVSGD GQLYSPQQFSFSAPYYQQSVPPGMPYLSSPTPISQGEAMVPIDPTQGAFIAETLSPNS FLFGPRPEWFRSSEGNGSFPSPAASPQPAGGVSGPFGQSNFPMASGMQSPQHRPFYGF GTPSDSYGRVFSHGGYFPQATNYGGPFPSFGLNGTSSIPMEKGRRRGRGNALLCSCNG SLDFLNEQSRGPRATRPKKQPEDGGKDEKPSAGVDCELYNRPDFVTEYKNARFFIIKS YSEDNVHKSIKYGVWASTTNGNKKLDSAYREAKEKEEHCPIFLLFSVNASAQFCGVAE MIGPVDFEKSVDYWQQDKWTGQFPVKWHIVKDVPNNLFRHIILENNDNKPVTNSRDTQ EVKLEQGMEMLKIFKDHEEDASILDDFDFYEERERALLDNKARLHQQHQLPSSTVVEP KKPLTVATDLVGHITKSFAQAVRLGEAKNVSPNSADKGASGDSSVAAKPLEVKEAGLA </aaseq> |
| Gene Sequence |
<dnaseqindica>4434..4781#4097..4309#3455..3973#2695..2813#2289..2595#2130..2212#1848..2025#1651..1724#295..328#attaatatataataaaagaagatcgaagcgaagcgcacctctctcctcttcttcttcaattgatcaggttgagagggacgacaacatcagatcacgagccacgcaatcgcaatcgcagaggggagagagagaagagggatcgaatcgaatccagtcgaggaggaggagggcccctcgggccgatccgatcgagaggaggagggatccgagctgaacgattcaacccaaggctcgcgggatttggcgcgagttgagccataccgatccctctgccttccgacggacggatccctgatggaatcggcgcacggcggatcggatcgcccaggttagcgcggggattttttttttcgtctctgtttcgatttttggctggatggttgggtttggggttgctcttcgatctggggttgcatcggtgcgattgttttttggttgattcttgctgggttcgggatgttccccttgctagatcttgctgccaagtgcgtcggatcttggcgcaagctgtctgcgtcgcttaattatgacaattcatagatagtatacgtgattaatttttccctgatgccatccatgtcatagactcatagtggtgccgttggaattattgagtgaattagtggattattaagattagatttcagggattcgggcagcgaagacctgctcaagcatcgacattgccgtcttcttttctcctcttcgcgtccgtgaataatggcaggtggtgtggactattgttggttcgcgtgcaggtttagcaatgtgcgattttgtcggttgggtaagatgccgctttcagatggaaatcgcatcacgtgttcatggtttgtacaggcagcaacctgcactaaaattccggcgagccagtatacctgaaaaagatacggacgcaaccaatgcctctagtgtgtctcctgtgagcagcagcagcagctggcgcagggatagtagctgcacgaagggagaaggtagtagtggtaggatgcctgtcagtatcgacaattgcctgtagaggccacaattgtggtttttagtatggttttgactagttgataggacggcagtgaatgatggaaaattgatgcctttattgtgcacggctgcatatgctattggctactatgtggtggagaagtactcccccgaaataagttgattcctaatgtctagattcgtagccagaaattaatacttattttgggacggaggaagtatgtggtactaaagtacactaatttcagtaatttggaatactagtgcccatcagcccatgtatgtgattgtttagaagtgtggctttgttcatgaactgaatgatatggttctatggtacatctaagtaagtacaatggggacttaggcacgtagctgtctttatttggtacttcaggccatttacgatgcttacctttgttgattagtgtgcctcacctttttgtttcgaagtggcagggtataaaatgtattacttattaattcgcctaacaaagaagtgcctaatacagcatgatccttaaaaattactttgcaatacaattttctcttacttttgtgttttttgcgaggaattttctctacatttaattggagtaaatctatgttccttgaatgtttgatttgatctgttcaatctccctcccacaggctcaatggattcgcaggagccaagagttgatgctgaacaaaaacctgttctttctgataaccctgaagagcaggtcattactttatgatatcatttagagatgttctatacaatcttctgattgtcataattgccttttttgtgctgattgttgtagtttttttttgtttgctgaaattgctttttatgaccttagaccattcctagcaaagatgagaaggtccttgaacccaccatttcacacgattcaaatggtatcaatctaccaagtgaaggacaagcccaagctggcacttccaatataggtgggggacacaatgctgcatatcctcaaaccatgtattcttctcaggcacagccattctattaccaaggtcagatcacaaaccatatgttcttctcaggcacactattctctaattgatgaatgttattgttgagtccttgacataattgataatttgtcttttatgagcaggtccaggatatgataacccttcaaatgaatgggatggatatcctccttatgtgagtgttgaaggcttggaagcaggtccagcggtaagcaatctgtttttttggttgccagaagtttttcgtcaagcaccttttctaaaattgttggcttttattgaaggttgtatacaatgatgatcctcaattgatgtaccatggtggctatggctatgacccttatgctcattattctcctatctcaacgcctgtaccggctgctgttagtggagatggtcagctctactctcctcagcagttctccttctcggctccttactaccagcaatcagtaccacctggcatgccatatttaagctctcctactccaatatcacagggtgaggcaatggtgccgattgacccaacacaaggggcttttatcgccgaaactctgagtcctaacagcttccttttcggaccaagacctggttattatctatcttatgccttgttcagctgatactcctaattcaggtttcactttttaggcatgattttaaccttttatctcatgatgataatttcagaatggttccgatcgtctgaaggaaatgggtcgtttccatcacctgcggcttcacctcaacctgctggtggcgtttcagggccctttggacaaagcaacttccctatggcttctggaatggtattctatgcacatgccatctcttgtctatttcttttgtcaaatgaaatagtggttcaccctgttgcgagctactaattgtcataggtgtctggggattaatccattcagtttccaaacaatcttgcctaagtttaattcacataacaataagcttagtagactaataaaaaatgctatgcaatctgcagtgccttttctgattgaaatagatggccgcatattctctcctattctgttttcgtgtgatcttttaggccataattcagttaccataaacatggtcattcttgaatttggatataatatcttctgactagacatgtaatggcaagaatgcctggttagaattctgtaaattcttataatgaatggtcctgattcccgatatggccaagttgcctctagttcaaatgcaaccttaagctttggttttcttcttgccagtgaatttcacagaaatttacttagaattatgaattgcttttcctgataaggacactgtttactatctcaaaatgactactatcacttgtctgataaggacactgtttacttgtcggatatttacaatgacacaggcatatttacttgtatgatctatcttctgacactcttccttttttcccctctaatttcagcaatctcctcagcacaggcccttctatggttttgggacaccaagtgactcttacggaagagtgttctctcatggtggatatttcccacaggccactaattatgggggccctttccctagctttggcctgaatggtacgagttctattccgatggaaaaaggccgcaggagaggaaggggcaatgctcttctttgcagctgcaatggttcacttgacttcctcaatgagcaaagccgaggcccacgtgccactaggcctaagaagcaaccagaggatggcggcaaggatgagaagccttctgcaggcgttgattgcgagttgtacaacaggcctgactttgttacagagtacaagaatgccagatttttcatcataaaatcatacagcgaagacaatgtgcacaagagcatcaaatatggtgtttgggctagcaccacaaacgggaacaagaaactagactcagcctaccgtgaagcaaaggagaaagaagagcattgcccaatttttctgctgttttcggtaattaaagctgtgacctactttcttattgttcctttactgccttcatttttttgttagtggttttgttactttgaatttgttgtttctcttcagagttaacagtttgaatgctatgtacaggtgaatgctagtgcacaattctgtggtgttgcagagatgattgggccagtggattttgagaagagtgttgactattggcagcaagataagtggactggccagttccctgttaagtggcacattgtgaaggatgttccaaataatcttttccgccatataattcttgaaaacaatgataataaacctgtgaccaacagccgggacacacaagaggtacataataacgataataattcttgttttccccttttactttgatatgcatgttgatattacaatgtaatggtttcaaccatttaatctgacacaaatagatgtctgcattatattatattaggtaaaactcgaacaaggtatggagatgctgaaaatcttcaaggatcatgaggaggatgcatcgatactcgatgactttgacttctacgaggagcgtgagagagccctgctggacaataaggcgcggctgcatcagcaacatcagctgcccagctctactgtggttgagcccaagaagcccttgactgtggccactgatctagttggtcatataactaagagctttgcgcaggcagttcggcttggtgaggccaagaatgtgagccctaattcagctgacaaaggtgccagtggggattcatctgtcgctgcaaagcctttggaagttaaagaggccggcttagcataaagccccagggtgattggttcatactgaaaattctctgatccatgctcttcctctttgaaatactaagaaatgggcgaagacaatgtccagcgcttctgtctggtgaagcattgtacactaggataggatggaagcctagctccttaaatagtttctttttttacctttcttttgttccttatcttttcctgttggtaatatttttcgttgcgtttatatgatgatcgattccttagtggctagccttaaggagagctgcagtttttgtgcaagcctctgtaaatttcccagttcaatcgatctcaagatgaataaggccttttgcctcctccagtaaaatcctctttaatctacttgtcttatactgaacaaggtgtgtctggaaaacaacataacatctgtttgggtgacctggtgatggtaacaataacaacttgttaataataaagagagtgtgaccttgtggtggtcgcttatg</dnaseqindica> 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