Os08g0559900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0559900 |
|---|---|
| Description |
PAP/25A core domain containing protein |
| Version |
NM_001069040.1 GI:115477818 GeneID:4346320 |
| Length |
5900 bp |
| Definition |
Oryza sativa Japonica Group Os08g0559900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:28102064..28107963 |
| Sequence Coding Region |
28102120..28102190,28102525..28102559,28103189..28103377,28104030..28104209,28104537..28104721 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:28102064..28107963 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:28102064..28107963 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccgccgccgcctctcctcctgtcccgtccaaagtcgacgcctcgtctcggcccgaccgctcccccaggccgcagagcttggaaatctcatgggattcacaagcagcgttatgcaagcgtgcagagagttgcgagttggaggcagaagtaccctctatcaatcctactttgcttccagttctcgaggatttacttatagaattatatgcaatattgcgtccaaagcctgatgactatgagcaacggcatttgatgatcgatgtcttcaacaaaatagcagaagagatatatggtaaaaagaaggggtttccagttgtggaagcatttggatcgttcacaatggatctatttacttccaaaagtgaccttgacctctctgtcaactttaatgctgattttcatagtcaatttgctcgcaaggacaagatttctgttattcggaacctcgcaaaagttctatatgctcatcagaggaatggccgttgtcatggggttttacctgttgtaactgctaaagttcctgtactgaaggttattgataagggaactggggttgagtgtgatatttcagttgagaacaaagatggcatgtcaagatcaatgatatttaaacttatttcatccattgatgaaagatttcagatactatgttatctgatgaaattctgggcaaaggcacatgatgttaattgccccagagatcgaacaatgagctcaatggcgattatctctttagttgctttccatttacagacccggcgacctccaatcttacctgcattttctgccttgttgaaagatggtccagactttccaagtattcagagaaatgtctcactagttgaggggtttgggagcagaaataaagaatcagttgccgagctttttgtgtcacttatgagtaaactactatcagtggagggtttatgggagcaagggctctgtgctagcaattttgaagggtcatggatctttaagacctgggaaagaggagttggtaacttgagtgttgaggacttcttggaccggtcacagaattttgccagagcagtaggcaaggaggagatgcagaaaatcagcgaatgcataagggtcgctgttttgaatttgaacaatttctttaggggtaaaattgatgcaccaaagctgaagaaccttttgtttgagccgcctcatcaggatgagctgatcagtaatcccagtctaaagcgtcctaagaggaaggaccacccaacgcatggcccagaaagcaacccacagcagcaaaagaaagcgaagcatattattggcccagaaagcaaccagaagcagcaaaagaaagtgaagcatactgtaaaccctggaccggccgctagtagatctgccactaatttacaccgtcctaccgcatttgtgcctcaaatacggcccatccaaccaattaatcaggtttcccacatacctcaacctttggttgaccctatgtttgcttatgggttaccaccacaacagcatctacattcagctcccctttattgtcaggggttactaggtcaacagcagggtaatttcatccacctgaatcctggaatccaaccgcagcagcaagcccaacatatgtttgtccctttactagaacagcaacctgtgatcaatggttttcacccctatgatttccatttggcccagctaattcagcataacgagaatatagcgttacaaaggaatatagcttatggaacctatccatattacaggagatga</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAASPPVPSKVDASSRPDRSPRPQSLEISWDSQAALCKRAES CELEAEVPSINPTLLPVLEDLLIELYAILRPKPDDYEQRHLMIDVFNKIAEEIYGKKK GFPVVEAFGSFTMDLFTSKSDLDLSVNFNADFHSQFARKDKISVIRNLAKVLYAHQRN GRCHGVLPVVTAKVPVLKVIDKGTGVECDISVENKDGMSRSMIFKLISSIDERFQILC YLMKFWAKAHDVNCPRDRTMSSMAIISLVAFHLQTRRPPILPAFSALLKDGPDFPSIQ RNVSLVEGFGSRNKESVAELFVSLMSKLLSVEGLWEQGLCASNFEGSWIFKTWERGVG NLSVEDFLDRSQNFARAVGKEEMQKISECIRVAVLNLNNFFRGKIDAPKLKNLLFEPP HQDELISNPSLKRPKRKDHPTHGPESNPQQQKKAKHIIGPESNQKQQKKVKHTVNPGP AASRSATNLHRPTAFVPQIRPIQPINQVSHIPQPLVDPMFAYGLPPQQHLHSAPLYCQ GLLGQQQGNFIHLNPGIQPQQQAQHMFVPLLEQQPVINGFHPYDFHLAQLIQHNENIA LQRNIAYGTYPYYRR</aaseq> |
| Gene Sequence |
<dnaseqindica>57..127#462..496#1126..1314#1967..2146#2474..2658#2777..2872#3072..3117#3238..3344#4077..4178#4264..4998#acttcacgtcttcaccgccagaaaccgacggccgccgccgccgccgccgcatctgcatggccgccgccgcctctcctcctgtcccgtccaaagtcgacgcctcgtctcggcccgaccgctcccccaggtccgttattcttcgctcctctgccccccttcgtgttccgctgatccccttgtgcttttggggggaattggagtcgccgcgtgcgtgcgtacgaccaaattctactcggattcttcttcttgctcatggtactagtagttctataagacgagagagcgaggggattatgctttgtagatactagtatatgcttaagcttaatcctctccttcagaatttgctgccatgtctagctttctggattggtacgactacggaccaacccgatttattttcccccggtttatgatgacctctcagttaaaatttctttccttttggtgtcatcctgcaggccgcagagcttggaaatctcatgggattcacaaggtagtactatttaactatctgtttattgctgctcccaatttttttttattattggtgtatattacttcctgcctcatgctgctcttcgattcaagcacatcaagaaccaaacctttctgttagattcctctgctacggtatcatttctgtacaccagggcatcacagataacaactgtatcatgtgaccatgtcagatgcatgcaagcagcatgctatatcttctgcactcaatacaactggtggacctagactaatactcctatatttcttatgagtaatgacagtttcattttgcggcaaagatagctgcttgtctgtttttccgtccacaaagttatcctgtagcctcttgtcatgtttcgcttctctagatttcctgactacttagaaataagtcaatagcttctctctgcgcaagcaaatgctggcagctctaaatatatacgtggtggctgtgattgtttgcaaacatgacttctttatatgaaggagtactctgggcatgtaaatgctgaaacagttgtgaattaccatgcttgataccaattacacggacttctgcgccattaatgaatactttcatgtacgctgcaactgataccttttatttaaattttgaattactagcagcgttatgcaagcgtgcagagagttgcgagttggaggcagaagtaccctctatcaatcctactttgcttccagttctcgaggatttacttatagaattatatgcaatattgcgtccaaagcctgatgactatgagcaacggcatttgatgatcgatgtcttcaacaaaatagcagaagagatatatggtaagagttatatttcatctgttatcatgggtcgatgaattatgctttcaaaatatgcgcttttgatcattgtaattgctgactatgcttgaaaatataatatgagagttgcaaaagatgcattttcttgtaattcatacacatatgcaatcagggaaattcatttgcagttcaacaatagtgtgaatagggttttaaacacctgcagttatgattcatatgcgtcagcattcagcaaaatatgctttttctgtgcacctcagttatggattgctgacacctaatggtcaagcaaagacttttgcttctgatgctagaaagatgcatagtgcaaaattttgtgttgaaacttgtacataacagagcattggtgaaaaggataatgcatttggaaacacaagcatgaaaattatatgaatttggcttgatttgtactacaaatatgcctagttaacctccttttttgactgttagttgatcagttaacttcaacatgcattgttcagatttctgtgtgtgtctacacttttgcaatacacttttctttacatgcaagattccttcttttaccatgaatacttagtctctgcctgaatattgcaaatttgtgtgatattatgacctgtttcctgattatgatgcctccttccaggtaaaaagaaggggtttccagttgtggaagcatttggatcgttcacaatggatctatttacttccaaaagtgaccttgacctctctgtcaactttaatgctgattttcatagtcaatttgctcgcaaggacaagatttctgttattcggaacctcgcaaaagttctatatgctcatcagagtaattatctacactctctaggtttatgtaacagatccaaaagggtcaactttatatccatatatttatggtgtcccttcatatatgttgcaatatgtgtcacacaccaaatatctaaaatttaaatgaagaatttaaattagttttgttattaacagtatatcaaattatcggtgtatgtttgataagaagtgtattctccttgacatagtgttgacaattggacataaataacttcattttgatatatgtcacctatttaatagaaccttttgatgccaattttaatgtgatttcgtttccttgtccttatattgtcaatatcagggaatggccgttgtcatggggttttacctgttgtaactgctaaagttcctgtactgaaggttattgataagggaactggggttgagtgtgatatttcagttgagaacaaagatggcatgtcaagatcaatgatatttaaacttatttcatccattgatgaaagatttcagatactatgttatctggtattgcaattctctgtcacatttttttcgttccaatgggcaataaaattgttgcaagaatccccataaagtggccttctaaaatatgtgacaccaaccgtttctgttaattctgcagatgaaattctgggcaaaggcacatgatgttaattgccccagagatcgaacaatgagctcaatggcgattatctctttagttgctttccatttacaggtttgttactttgacttgagtttttattggactttttagtcatgagtatcaagtagttagggtagcttcaatggcctcatggaatttccattaaagttctacagcctgtatgtataagcttgcagttaatcctaagtccttttttctgttggcaaaaagagaaataaacacactttttattaaacaatgtggattacagacccggcgacctccaatcttacctgcattttctgccttgttgaaaggtactctctctatttttaggtgtatgtcattctcactgctacgctttcctgggattggtttctctgttgttgatataaaacttatatgaagaaactaagataatttccatcgtcttgtagatggtccagactttccaagtattcagagaaatgtctcactagttgaggggtttgggagcagaaataaagaatcagttgccgagctttttgtgtcacttatgagtaaagtaagtgaattaaaaatgcaccttccatttatgtttgttacaggccaatattctattttgaatccatagggatattgttgagttatggttgttttgccctcatttcctagagtttttacattgattgacaaagggatatctccccttgcacatgacttgatctaaacccctgcaaatgtctgaacaaatgcccagtttgaaaaagattattgactggattattgtagtggattatctgcacggcggtaaatacaaattaaatattttgataaaaaatattaataaataagaagcttagaataagggatctaagcaatgcagtagaagaaaggtttttgagaaaacatatttttagaggctaataatccgtgacaaaaatctgtgacagtaaactcccagtttgacccagctgggacgggacggtcctgttcacctggtccatgtcactgttctcttgtgcccttctaaacattgttctcttgtatagcatcatcgacttcattatctaattaagggatcttgttacacagttagagagggttataccacctgagtccatctaatttgttgctaggcaaagttgtttgcttattttggtgtcgtatatacgtatgaacggtttgtaagctgttcattgattacttagttaacattacttccacaaaagagcccttccttcttaatgtcagaactcattatgctgacagacactattgaccttctctcatgcagctactatcagtggagggtttatgggagcaagggctctgtgctagcaattttgaagggtcatggatctttaagacctgggaaagaggagttggtaacttgagtgtaagcttttccatgaattcattgtgcttttttagtaacttttgcaaaagtttgtttatttatacacaacaagcaattcatgcaggttgaggacttcttggaccggtcacagaattttgccagagcagtaggcaaggaggagatgcagaaaatcagcgaatgcataagggtcgctgttttgaatttgaacaatttctttaggggtaaaattgatgcaccaaagctgaagaaccttttgtttgagccgcctcatcaggatgagctgatcagtaatcccagtctaaagcgtcctaagaggaaggaccacccaacgcatggcccagaaagcaacccacagcagcaaaagaaagcgaagcatattattggcccagaaagcaaccagaagcagcaaaagaaagtgaagcatactgtaaaccctggaccggccgctagtagatctgccactaatttacaccgtcctaccgcatttgtgcctcaaatacggcccatccaaccaattaatcaggtttcccacatacctcaacctttggttgaccctatgtttgcttatgggttaccaccacaacagcatctacattcagctcccctttattgtcaggggttactaggtcaacagcagggtaatttcatccacctgaatcctggaatccaaccgcagcagcaagcccaacatatgtttgtccctttactagaacagcaacctgtgatcaatggttttcacccctatgatttccatttggcccagctaattcagcataacgagaatatagcgttacaaaggaatatagcttatggaacctatccatattacaggagatgacagttgcagtatgagaatgtagctaggtaatgtttctgagataggaagttcacaccgtcgccatgtaccctggtgcaaatcaattcgttgatttgttgtaaaatttagttgtgtgttgtcatatatgtgctggggaagaaattaagtagagaggcagattttgcatagctatcaaaagttctggcaaaaccatgctgctgactctgccacctagttttgtcaccgcagattgtgagctctcatttttccttgtgcaagtgggggtaagaagaattcacgattgtcatggatcaagattgagaggtgtgctgcaaagcttgctgttgaaaattctgtcagtcatgcaagattgatggatgctgatgatgaatcacttggtgtactagcttatatataatagtaaaaatatccagcaagaccaacaagaagcaactgcattgcatcagcatgttattcctctgctaagcatccaccactgcagagcaacctcatggacaagaaatggcaacatctgcactgctgctggtgataggtatggatgagctgttccaggtttgttgggtatcagctgataaactgggactgttccaggtttgttggtatcagcaaaaactggagctgccgcccatggtaatctcaattctggtgttgctgatgaccacataacctgataagatggaaactgcatgcaactcacatagcccggaacaagatgctttccatcatcactcgtgttttgcctgatgcgatggaaatacccagacaaggtgagcttttgcacgaaaatgacatgaaaaataatatgcctcccttttccttgcttgcactgtacatacctgaagcatatgatgtaccagtacgatgggatagtgaacagtatgccgttctgttttttgccatgg</dnaseqindica> 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