Os09g0448100

From RiceWiki
Revision as of 21:00, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0448100

Description

Cyclin-like F-box domain containing protein

Version

NM_001069851.1 GI:115479444 GeneID:4347210

Length

3038 bp

Definition

Oryza sativa Japonica Group Os09g0448100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17401958..17404995

Sequence Coding Region

17403077..17404284,17404711..17404801

Expression

GEO Profiles:Os09g0448100

Genome Context

<gbrowseImage1> name=NC_008402:17401958..17404995 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17401958..17404995 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcggagttacgagagggcgctccctgccgtcgcgaaccaccatcgccggcgcgggcggcgccgaagggggccgcggccaagacggcggccgatcagcttgagagattgttgtcatggcagcgaaacaatctggtgactactcggccgcgaaaggtgatgcgcattgttatcaactcttggtcgaggttcatgccccattacatccctgatgatgtgatgttcaacatcctgtcatggctgccatccaagtctctcatccgatttaagtctgtgtgcaaggcttggcatgccatgatatccagcccgtgtttcactgatgctcaccttgagtgttccaagagaaacccatcgatactcatggtccctggtgcttatgagaagcaggaggacggtgagaatatcgccttcatgatggtcctctataagtaccatggaggtaaaacaatggaactggtccatatgcagaactttccgctaggcattggtgtatggactcgccctgtgcactgtaatggtttactcctcattcccaccatgaacctcgaaatgatgatctgtaacccttcaacaagacagattgttttcctaccaaaagtcagtggcaacatttgcacaggcacaagggctggatttgggtttgatcctcacagcaacaaatacaaggtggctagatctttctatcaaagggatagtgaaacacaagaattagtctgcaagtttgaagtgcttactctgggcactaatgcatggaggcaaactgaagatccaccatatccaattgatgctttaactccagtccatgtgaaaggcgccatctactggatagtgtgtagttcactttgcccagatccacctaatgcattcctccgattctgtttgactgatgagaagttcagtttgtttccgtgtcctccatccaatgtaaagtctgtccgtttcacagaggtggagggtgaactgtgttgtgcttgctttttcagtgagacgctagcgctggagatttggaactgcagtggtgggcagaaccttgaatggactcgacgctatgttatacagattccacctgatgttgttatgaagtaccctgtagaaagaccccctttaattgtttttcgtgaaaaaatgttgctgctggcattcaaaaaggtctacaggtatgatatcgaaacctgtagaatagtagaattagcttcaaaggtttcagacttcacctgctatgaaccatatttggagaaggaagcaagggatttgcatctatttaattatgctgagagtctagttccaattagagaattttga</cdnaseq>

Protein Sequence

<aaseq>AELREGAPCRREPPSPARAAPKGAAAKTAADQLERLLSWQRNNL VTTRPRKVMRIVINSWSRFMPHYIPDDVMFNILSWLPSKSLIRFKSVCKAWHAMISSP CFTDAHLECSKRNPSILMVPGAYEKQEDGENIAFMMVLYKYHGGKTMELVHMQNFPLG IGVWTRPVHCNGLLLIPTMNLEMMICNPSTRQIVFLPKVSGNICTGTRAGFGFDPHSN KYKVARSFYQRDSETQELVCKFEVLTLGTNAWRQTEDPPYPIDALTPVHVKGAIYWIV CSSLCPDPPNAFLRFCLTDEKFSLFPCPPSNVKSVRFTEVEGELCCACFFSETLALEI WNCSGGQNLEWTRRYVIQIPPDVVMKYPVERPPLIVFREKMLLLAFKKVYRYDIETCR IVELASKVSDFTCYEPYLEKEARDLHLFNYAESLVPIREF</aaseq>

Gene Sequence

<dnaseqindica>712..1919#195..285#gagggaccttcggtgtaccttttcctttctcctcctcgagaatccccaaatctcgctcgctattcacgcgaccacgcaaaccgaccttcctccgtcgctcggccagcggccggcgccggcgcgcggggtccacctgaggcggccatccccttcccaggctctcaagccaggaatccgctcgccgtgcgacttaggcggagttacgagagggcgctccctgccgtcgcgaaccaccatcgccggcgcgggcggcgccgaagggggccgcggccaagacggcggccggtgagttctctaatagcagataaagtttatctgcaccgttctagttcataagtttttgttaatttcatgtttgcctcagcaagattcagtttttctcccttggtaacagttgctagctttttctgtattgtcctagttcctctgcagctttacttgaccgaaagagataaagataaaaggtttattttgtgaattgtgaagaaaccgccgctgcctggcaactccgaacaggatttagaatcgggttgaggaattactagtcccaatcggatcgaagttcggatgcctagctcgatttgcatggccaatacttcctttataagtggggaaaagctctcccctcggtgaccagactatatatatatatatttaataactcctttttaagtgcaaagtcataacctatctcctcgtcatcttctgcagatcagcttgagagattgttgtcatggcagcgaaacaatctggtgactactcggccgcgaaaggtgatgcgcattgttatcaactcttggtcgaggttcatgccccattacatccctgatgatgtgatgttcaacatcctgtcatggctgccatccaagtctctcatccgatttaagtctgtgtgcaaggcttggcatgccatgatatccagcccgtgtttcactgatgctcaccttgagtgttccaagagaaacccatcgatactcatggtccctggtgcttatgagaagcaggaggacggtgagaatatcgccttcatgatggtcctctataagtaccatggaggtaaaacaatggaactggtccatatgcagaactttccgctaggcattggtgtatggactcgccctgtgcactgtaatggtttactcctcattcccaccatgaacctcgaaatgatgatctgtaacccttcaacaagacagattgttttcctaccaaaagtcagtggcaacatttgcacaggcacaagggctggatttgggtttgatcctcacagcaacaaatacaaggtggctagatctttctatcaaagggatagtgaaacacaagaattagtctgcaagtttgaagtgcttactctgggcactaatgcatggaggcaaactgaagatccaccatatccaattgatgctttaactccagtccatgtgaaaggcgccatctactggatagtgtgtagttcactttgcccagatccacctaatgcattcctccgattctgtttgactgatgagaagttcagtttgtttccgtgtcctccatccaatgtaaagtctgtccgtttcacagaggtggagggtgaactgtgttgtgcttgctttttcagtgagacgctagcgctggagatttggaactgcagtggtgggcagaaccttgaatggactcgacgctatgttatacagattccacctgatgttgttatgaagtaccctgtagaaagaccccctttaattgtttttcgtgaaaaaatgttgctgctggcattcaaaaaggtctacaggtatgatatcgaaacctgtagaatagtagaattagcttcaaaggtttcagacttcacctgctatgaaccatatttggagaaggaagcaagggatttgcatctatttaattatgctgagagtctagttccaattagagaattttgagaagttacttctgtctgttagtgtgagcttctccacaacttgtaatgatccaaggtagggagaagtttgttttttttggttgcaagtgtcagccaaggttcattttcattgaattcatctgtgctactattttactgtaacaatcaatttttctttctagcggtattgaccatgaaacgcaataagtatcatgtgaattgtcctcagttatgttgctcagaataactcctatgcattttgccacttacatatgtgatatgttcttttcttgttttaattaacattttatattagcaaatatattcttactaatgccatattttcattgttgtttattaatatgttctatcatctgaggagatcatcaaaaaataatctggtccatctgaaactagtactcccaacagagctagtgctttttaagagggagaagaaagcgggctacagatatgtgattcagcgctgcaagtgaatgatcccaatctttgctcttgcaccattgctcaaacttgtgccatgttttttttatcaaggagtttcaatcggtcagtcacttgtgattctttttacagattacatttgttgcacttgctgaagattaaggtatctgttgttgcttgctggttctcgtgctattgttctctactgtttttgctgaattcttcagctggtgctgctgttgatgtgctgttgtcgaggccacgatcaggagttcgtgaccgtgatttcgcagagggagagacggaaataaaattcagttggtggtttcgtagagggcccacttttaattttagaaagtcaattttagacaatctcctggagggatcaatattttagcacatcaaattttgtttagcattcccataaaaatagttttgggaatgaaatattgggatactcttggtgatcttggtgatgctctaattcccacggcagccagcctaaacgtcgccgtgcagtgtgcggacgcggcctgtgccacctccgtaccatgcgtatccaattctcggtttattcgggaaaaccgaacaagaaagctgaacactttcatatactatggatgtgtttagttctttggtgtaaagtttttgaagtatacggacacatatttttgggtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0448100, RefSeq:Os09g0448100