Os07g0111400

From RiceWiki
Revision as of 20:30, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0111400

Description

WRKY transcription factor 29

Version

NM_001065272.1 GI:115470276 GeneID:4342232

Length

3564 bp

Definition

Oryza sativa Japonica Group Os07g0111400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:629682..633245

Sequence Coding Region

629819..630260,631695..631838,632906..633192

Expression

GEO Profiles:Os07g0111400

Genome Context

<gbrowseImage1> name=NC_008400:629682..633245 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:629682..633245 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggcgggcgccggcgactggccgttcgccgccgacgaagcgtacgccgactcgtcggccatattcgccgagctcggctgggccaacgggctcgccgtcgtcgacgccgtgggggagctactgccgccgctggatccaccgggcgagctggccacgccgccgccgccgccgctggatctgccggagacgccggccgggtcctccgcggacggcgccgcgtcgtcgtgctccaccgacgacgccgacggcgggaagccggccgccgcgtccaccgaggcagcgagcaagtcgctgacgcctgggaagaagagggcgcggcaaccgcggttcgcgttcatgacgaagagcgagatcgatcacctggaggatggctatcgctggagaaagtatggccagaaagccgtcaagaacagtccttttccaaggagctactacaggtgcacgaacagcaagtgcacggtgaagaagcgggtggagcgctcctccgacgacccctccgtcgtcatcaccacctacgagggccaacactcccaccacaccgtcaccttcccccgcgccgccgccaccgccgccggcttctcgcacatccacgccatggccgccctggccgccgcacccttctccgcgcaccaacaactgtacagcaacctgcagccgccgccgccgacgatgccgcttgctgctactactccggcgtcgtcgtcgtcgctgctacagctgcctctgcactgcaaccatgagctgcaggttgttgccagctgcggcggctacccgtcgtcgtcgtcgtcgccgccggcgagtgttcttcccgtcgacaaggggctccttgatgacatggtgcctagggcaatgaggcatgatgggtag</cdnaseq>

Protein Sequence

<aaseq>MAMAGAGDWPFAADEAYADSSAIFAELGWANGLAVVDAVGELLP PLDPPGELATPPPPPLDLPETPAGSSADGAASSCSTDDADGGKPAAASTEAASKSLTP GKKRARQPRFAFMTKSEIDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRV ERSSDDPSVVITTYEGQHSHHTVTFPRAAATAAGFSHIHAMAALAAAPFSAHQQLYSN LQPPPPTMPLAATTPASSSSLLQLPLHCNHELQVVASCGGYPSSSSSPPASVLPVDKG LLDDMVPRAMRHDG</aaseq>

Gene Sequence

<dnaseqindica>2986..3427#1408..1551#54..340#gcactactagctagctgctgctcctccggctggccggccggccggagtgtgccatggccatggcgggcgccggcgactggccgttcgccgccgacgaagcgtacgccgactcgtcggccatattcgccgagctcggctgggccaacgggctcgccgtcgtcgacgccgtgggggagctactgccgccgctggatccaccgggcgagctggccacgccgccgccgccgccgctggatctgccggagacgccggccgggtcctccgcggacggcgccgcgtcgtcgtgctccaccgacgacgccgacggcgggaagccggccgccgcgtccaccgaggcagcgtaagtacaataattaatcgcagttaatttgttgcaagagattaatttaatttactcgataaatcgcttgttatttccctccaaattatccaaattatggttctcttagcatactataaaattgaattgaattcgaaacaaggaactaattaatttaaaacttttcaagtctcttctatctccttttcagtttttcctctttttttttgctttgcattttgtttggatggagatgatttaacggtggccaattcgtttacgtggataattaattaattaatttacgcatttctccgaggggcaaaacggtaaaaaaagacgctactagcttctagccaagggagtgtgtttgtgtggttaatcttcttcgaacattgcgccgggattcgcgtgctaaacctccatcgcacatgtgcttataatttcctaattaatttaatgtgttcctcttaaattgaattgtcttgtctttatttacatatatatgctagcttttaggtgagcttatgttcattttttttgctagagataattaagtactggagtagtgtatatttttcagacacgtactacgtactctacatacgtgtatatatatatactctcaatctctcatattatatagcaaaaatctatgagtaccttggaagtgtttatgtttcattaatttatactactatttgccaattaatcgatcggtgcatgcatgtagcctagataatgcgcactagctacaaaaggaagtacgaatacgtacgtacgagtacgtgttggaattaggttgcgaattaaattgcaaaagaggtcgatctggtgagagaacaaacgtaattaattaattaattaagacaggatcatgaatatataggagtattaggcatcgagttaggacattttcattgcaagtcgtcagtaacataatttcttattgcctagctacttctacttgatggcttatagtagtagttttcttttcataacttttaaattctcgatctgaactatatacctttctgacggaaattctctacaatattaattttcatcgtgtggttatgtatgttcaggagcaagtcgctgacgcctgggaagaagagggcgcggcaaccgcggttcgcgttcatgacgaagagcgagatcgatcacctggaggatggctatcgctggagaaagtatggccagaaagccgtcaagaacagtccttttccaaggtgcctacctacattttatacatataaattcatatatggagtattacaaatgcatgcatgctgtagtaataagatgtctttgctttaatttggtttctctaatttcgatcttcttctaattaattaagtaatagttcctgatatgcatgattaatataattaattcagcacatatatacattcattctcgattaattgatacagtagtgcagcaactatgagtgagtatcagcacagtgggttcacatattaaagttgtgggctgaacgaaaaggacgacgtacttttagttagttgtatgcgtgtgttgtaaaagcgtatctactccaatatttttcataattacaatcacggtacttcgattctgaacatgaatatgccaacgaagcaaattaagcaactcagggaatgaaatgcgttgattaattttctggatttgattaacattgtatactttgattttctatgatttcatttcggtgagccacatacgcatgcaacaaaaatgtgtccaatcatgttaataactattggttgcagtaagtatagctaggacgactgctataattaaaggaatgctagtatgtatatataacatgatatcacataatctaattaaatagaaattgacttaggtagtcgtatctttctcaagttatgatgcaaactccaatggtttttggctgttacaatggcggtgaatgatgttttaagctagaaatatcccccaaattactcctttcagcactagagtaaagactatttgtaattttattaaataatacaaccataaccttattaggcaactaccattaattttcttctatatgctcttgtgcacaaattttctagtcggatataaagcatgtgcagttgttttgatggcttttattcataacgtatacacacacactctctctctctgtgtttaaaaatataagacgcgcacacacgtattttaagatttaaattttacaacttttgatcaacaagtagtctaatcatgtatatgtctagaaacaaaaaaaaagataatcgttgaattcgtatttgcttgcactttcatctattttttagtttcagtaccaataataatgtaatttgggagaaattgacggtcaaagtttgacattggagaccataccaaatcaaaccaagtcttatattttttttagtggagagagtatacctgttaagtgtagttactactacttactatagtagtattctagatgatgcattggtcctaaacccttgaaccctaaaatgtaacaagctaatataagctggctgatctccccccaacatgtatatatttcttctgcaaatgtaattaattagcccccaaactttttttgcaaataaattaatcaatcaatctcttggttaaattaattaattaacatgtgtgtgtatatataaaaaaaaaaacaggagctactacaggtgcacgaacagcaagtgcacggtgaagaagcgggtggagcgctcctccgacgacccctccgtcgtcatcaccacctacgagggccaacactcccaccacaccgtcaccttcccccgcgccgccgccaccgccgccggcttctcgcacatccacgccatggccgccctggccgccgcacccttctccgcgcaccaacaactgtacagcaacctgcagccgccgccgccgacgatgccgcttgctgctactactccggcgtcgtcgtcgtcgctgctacagctgcctctgcactgcaaccatgagctgcaggttgttgccagctgcggcggctacccgtcgtcgtcgtcgtcgccgccggcgagtgttcttcccgtcgacaaggggctccttgatgacatggtgcctagggcaatgaggcatgatgggtagtacaagcatgcacaccatcgatttaatttggggttaatttgtagcctaattattaatcttaattagctgcttcgatggattaattagcacggtaagtagttacttattcgtgttgagatcactggaaagataataat</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0111400, RefSeq:Os07g0111400