Os07g0122400

From RiceWiki
Revision as of 20:30, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0122400

Description

Protein prenyltransferase domain containing protein

Version

NM_001065328.1 GI:115470388 GeneID:4342292

Length

3657 bp

Definition

Oryza sativa Japonica Group Os07g0122400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1164824..1168480

Sequence Coding Region

1164903..1165144,1165839..1166074,1166808..1167017,1167098..1167188,1167543..1167780
,1167970..1168362

Expression

GEO Profiles:Os07g0122400

Genome Context

<gbrowseImage1> name=NC_008400:1164824..1168480 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1164824..1168480 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcctcgtcggagaacgtggaggcgccgcgagacgagcagcgcgacccgccgccgtcaccgccgaaccctagcgaggaggccggggcgggcgaggagatggaggcggagggggagggggaggaggaggtgaaaaccctagagcgggcggaggagctgttcgagagggggtccaaggccatcgaggagggggacttcgtcgacgccgtcgactgcctcagccgcgccctcgagatcagggttgcacatcatggagaacttgctccggaatgtgttagcacatattttaagtatggatgtgccttgctatacaaagctcaggatgaggctgatcctttgggtaatgttcccaagagttcatctaataaggagtccatgaagagtactactaacaaggatgatagtggaagctcaaagacccccggtagcaatactgaggatgctccatccacggataaagctgatgctgaagaagggcaaaactcaactggaaaaggtcaagaggaggaaaacggtgacagtgacaaggatgatgatgagatggtgggagatgaagatgattctgatttggatcaggcctggaaaatgttggatattgcaagggctatagttgagaagagcccagatgacactttggagaaagcaaaaatcttttctgctctagctgaagtctccatggaaagagaggacattgataactcactcggtgactactttaaagctttagccatattggagaaattgtttgagcctgatcatcgtcgaattattgatctaaacttccgcatatgtttggtctatgagttggtgtcgaagatttcagatgcaattccatattgcgctaaggctatttcattatgcaagtcacgcatacaaagcctaaaaaatgacaaagatgctttgttggctggtaaagatgataacgcatcagctgctgatggaggctcagaaaagtccgctcctgagggtgagatagagcagctcagtggcattttgagtgaacttgagaagaagctggaagacttggaacaagcaatgtctaccccaagctctgttatggatgagattatgaagaggattgcctcaaaggcaggtggtgaacagaatgctactgacacaatgccagcggctgcttctttcaattcttcttcacagatggctggatcaagcaacggctttgattcgtcaactctgtctacggcagctacaaccggaagtactggaagcactgtaaccgatcttggggttgttggtagaggtatcaaacgtgctaatatcaagccaatctctgctgaacctcctcccaagagagctgcagctgattcgctctcagtaaaaggtgatagcagcaacaactcagatgttcataccccagcacaagagggcgatgattctgtatcaaagtaa</cdnaseq>

Protein Sequence

<aaseq>MASSSENVEAPRDEQRDPPPSPPNPSEEAGAGEEMEAEGEGEEE VKTLERAEELFERGSKAIEEGDFVDAVDCLSRALEIRVAHHGELAPECVSTYFKYGCA LLYKAQDEADPLGNVPKSSSNKESMKSTTNKDDSGSSKTPGSNTEDAPSTDKADAEEG QNSTGKGQEEENGDSDKDDDEMVGDEDDSDLDQAWKMLDIARAIVEKSPDDTLEKAKI FSALAEVSMEREDIDNSLGDYFKALAILEKLFEPDHRRIIDLNFRICLVYELVSKISD AIPYCAKAISLCKSRIQSLKNDKDALLAGKDDNASAADGGSEKSAPEGEIEQLSGILS ELEKKLEDLEQAMSTPSSVMDEIMKRIASKAGGEQNATDTMPAAASFNSSSQMAGSSN GFDSSTLSTAATTGSTGSTVTDLGVVGRGIKRANIKPISAEPPPKRAAADSLSVKGDS SNNSDVHTPAQEGDDSVSK</aaseq>

Gene Sequence

<dnaseqindica>80..321#1016..1251#1985..2194#2275..2365#2720..2957#3147..3539#ctctctctctctctctctctctctctctctctctccccactcgctgcttccgccgccgccgccgccgccgccgcagcccatggcctcctcgtcggagaacgtggaggcgccgcgagacgagcagcgcgacccgccgccgtcaccgccgaaccctagcgaggaggccggggcgggcgaggagatggaggcggagggggagggggaggaggaggtgaaaaccctagagcgggcggaggagctgttcgagagggggtccaaggccatcgaggagggggacttcgtcgacgccgtcgactgcctcagccgcgccctcgagatcaggtgaggggctttctccgctacaccccctccgcttctacggttccatttcccgacctggctggttcgatgtgggggaataacgtaatatttggttcagtgatgctgtggatttgattgtgttgttgctgtcatgtggagtttgttattttgccttgtgtaattggggaggtgagtcgggtagggtttatgaggttctacagcaagctgtttgttattttgtcttgtgtaattggggaggtgagtcgggtagggtttatgaggttctacagcaagctggaggccatgattggcgattggatttctcttgtttatcaacgtggcgcaatggattgggctatcgtgttgaggaatcagtcaattctcctcttagcctcgtgttaattgatagcactagctaggagtttgttttatctcttgttattgtgtgtgaattgcgactaccatagcagcaaagtgcgattactcaattcttgatatctcagaaatatgtatgtatgctgctccactactgactagttggaaatatttcactgaggtcaagttatattagtttgtggttgtgcttggtaaatagacagagcagctaccaatctcgaactactgatccatctcagtttacattatgtctcaatgaacttgtactataacttcagtgcttgcgccctaacaaatttatgccttttgttgtcatcagggttgcacatcatggagaacttgctccggaatgtgttagcacatattttaagtatggatgtgccttgctatacaaagctcaggatgaggctgatcctttgggtaatgttcccaagagttcatctaataaggagtccatgaagagtactactaacaaggatgatagtggaagctcaaagacccccggtagcaatactgaggatgctccatccacggataaagctgatgctgaagaaggtataccattattgtaccatgtacctatgtagttgttattgtacacttatggccttttgtcttaccctgttcttatatactatgcataaaaacaatatcattaatatgttcttgttataaagtaatggtattttttggaaagtgttcagacttatttcctccattagtcaaattatcattatcattccataggaggccatttggtcacagtggatatattggttggtctgaaagggcaattatattttgtgctattgataatgcgtgattccagaggcagaaaaaatgttttgcggtttgtaaaaaaccattatatggccaggccatattttgaatacacctaggtttatttatctgtattcctttcttacttgtgcacttggaatagaaatggcagcttaaacagattaagcacttgcacaggatgcttttgcaaatttacgagtttcctttatttgagtaattatagtagcgtgcaataatgtaaatagttcttcttactttgctcaagattaaataattggtcttgcatttctataagaaaccttactagtttaattttaattgaacaaacttattggtcactatttggttgggtgggatcatttgtgcatctatatgcatctaactgctccctgtagcaggttgctattgtactataataaatgatggccacactccatgtgcttttcttcctggtttctgtggtaagtactgatatagttttggttagggcaaaactcaactggaaaaggtcaagaggaggaaaacggtgacagtgacaaggatgatgatgagatggtgggagatgaagatgattctgatttggatcaggcctggaaaatgttggatattgcaagggctatagttgagaagagcccagatgacactttggagaaagcaaaaatcttttctgctctagctgaagtctccatggaaagaggtctgtctccactatcttagttactctctagttttgatggtaaatggttttggtgctaatgccccatatttcattttcagaggacattgataactcactcggtgactactttaaagctttagccatattggagaaattgtttgagcctgatcatcgtcgaattattgatctgtatccttcttgtttggtaaacataatactaccaaattatctgcctgcaacctgcatccttctgccatatagcaagtataaaacaacatttgcaacccaatgctgtagtgcctgcaacctgcatccttctcgacttaaagagttaggcagctgaaggtgtgttttaaatattgttatacatgtatattttcaatgggagttccacccaaatctgcatggttaccttcattttcttacatgtacgtgtttgtctaaatgtggacatgaactgtggtatccagttcataggaaaggtgacactagtatcttttattttcagtttttattcctttgcttgccttaattcagtcctagaaacttccgcatatgtttggtctatgagttggtgtcgaagatttcagatgcaattccatattgcgctaaggctatttcattatgcaagtcacgcatacaaagcctaaaaaatgacaaagatgctttgttggctggtaaagatgataacgcatcagctgctgatggaggctcagaaaagtccgctcctgagggtgagatagagcagctcagtggcattttgagtgaacttgagaagaaggtaaaataaacttgattttgtctatatgaatactcctttgacattgccatcttattttcttctttcatatatgaatgctaaatacgttcatttgtgaaaataagctttattattttcttcatacaaatacgcctttcacattgccaacttcattttgttcttgaatatgtatgaattgtttgaattcagctggaagacttggaacaagcaatgtctaccccaagctctgttatggatgagattatgaagaggattgcctcaaaggcaggtggtgaacagaatgctactgacacaatgccagcggctgcttctttcaattcttcttcacagatggctggatcaagcaacggctttgattcgtcaactctgtctacggcagctacaaccggaagtactggaagcactgtaaccgatcttggggttgttggtagaggtatcaaacgtgctaatatcaagccaatctctgctgaacctcctcccaagagagctgcagctgattcgctctcagtaaaaggtgatagcagcaacaactcagatgttcataccccagcacaagagggcgatgattctgtatcaaagtaatgcattttaccctaggtagtaacttaatggaatctattcggtgccaaaatcctgtcttgcttaatatgtactgctgcatgtccattttctcagaagaactgccaatagggattgcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0122400, RefSeq:Os07g0122400