Os07g0132100

From RiceWiki
Revision as of 20:30, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0132100

Description

Concanavalin A-like lectin/glucanase domain containing protein

Version

NM_001065368.2 GI:297606681 GeneID:4342335

Length

2651 bp

Definition

Oryza sativa Japonica Group Os07g0132100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1719447..1722097

Sequence Coding Region

1719447..1721491,1721986..1722097

Expression

GEO Profiles:Os07g0132100

Genome Context

<gbrowseImage1> name=NC_008400:1719447..1722097 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1719447..1722097 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgggaccacctaagggacatttttggtaccgtgcggtaccacgcaacaccagccattggatcaggccagatccaacggccagcatttggtaccgctatggtaccgcgtggttttcatagagccatgtctggcatgaaccgttcgagctttcttccactatttttcatcatcatcgtcatcaagctcggtatcggtcttcttccatccttcactacagctgtcgacgatggccagtttgtgttcaacggcttcctcaacagtagtctcaccgtcgatggagcagccatggtgctgccagggggattgctccagctgaccaatggcaccggcatgatgaaaggccatgccttccatccaactcctttccgctttcgcgaatcgcccggtacgacgctgcactccttctccgtgtccatcgtgtttggtatcatctctgcctaccgtgaggttggcacggacggcatggccttcttgatcgccccgagctctaacttctccgacgcgaatgcggcgcaacacctgggcctgttcaattacaaaaacaatggaaatatgagcaaccatgtttttgctgtcgagatcgacaccgtacgaaacaacgagtttatggacatcgacagcaaccacatcggcatcgacatcagtgatcttcgctcagtgaattcttcttcggcaggatactatgatgataacaccggtggattccagaacatgagtttgattagtggtgaggcgattcaaatttggatcgattatgatgcacgggcaatgcggattgatgtggcattggctccattcaaaatggccaaacctaccaagccactactgttgatgtcctataacctctcaatggtgctgacagatgtcgcatatgttggattgtcagcagcaactgggccactagaaacaagtcactacatcttaggctggagcttcagcatgaatggatcagctccatcattcctcacagctcagctacctgacttacctcgtagaggtacagatcgaaaaggttctcgtcggtccaaggtattgctgataattgtgcctatagcaactgccacatctgctgttgcggtgagcttggccgtcttcctctttgtgcgaaggtggtttaagtatgccgagctacgggaagattgggaaattgattttggaccacataggttctcatttaagaacctatattttgctactgaagggtttaagaataggcacctattaggtacaggagggtttggaagggtgtacaagggttttctttttgaatctaagctacagattgccgtgaagagggtgtcccatgaatcgagacaaggtataagagaatttattgcagagattgttagcatcggccgccttcggcatcgcaacatcgtgcagttacttggttattgccggcgtaaaggtgaacttctcttggtctatgactatatgccaaatggtagccttgataaatatttgcactgtaatagtacccgtcctagtttagattggaatcaacggtttcgaataatcaagggtgttgcatctggtttatggtaccttcatggagagtgggagcaagttgtcatccatagagatgtcaaagccagcaatgtgcttcttgacgaagagatgaatgcccgcttaggtgattttggccttgcaaggttatatgatcatggcaccgacatgcaaaccacacacctggttggcaccatagggtatcttgcccctgagctggcaaacacaggtaaggcttcacccgccaccgatgttttctccttcggcatatttgttcttgaggttgcttgtggacgaaggcccattgagcacggaatgaatagtgagtacaagttcacgttggtagattgggtgattgatcgttggcacgagggatcacttcttgaggtaatggatccaaagctccaaaatggatatgatgatgatgaggcatgcctagctctaaaactaggattgctttgctcacacccatcacctattgcaaggccaaccatgtggcatgtcatgcagtatcttaaccatgacttgccatttccagagttgatggcgatggacatggtgcgaaaccaatgggtggactcacctattgaatattgccaatcagtggcgagcgatggcaccatgtctggcctgtctgaagggaggtag</cdnaseq>

Protein Sequence

<aaseq>MRDHLRDIFGTVRYHATPAIGSGQIQRPAFGTAMVPRGFHRAMS GMNRSSFLPLFFIIIVIKLGIGLLPSFTTAVDDGQFVFNGFLNSSLTVDGAAMVLPGG LLQLTNGTGMMKGHAFHPTPFRFRESPGTTLHSFSVSIVFGIISAYREVGTDGMAFLI APSSNFSDANAAQHLGLFNYKNNGNMSNHVFAVEIDTVRNNEFMDIDSNHIGIDISDL RSVNSSSAGYYDDNTGGFQNMSLISGEAIQIWIDYDARAMRIDVALAPFKMAKPTKPL LLMSYNLSMVLTDVAYVGLSAATGPLETSHYILGWSFSMNGSAPSFLTAQLPDLPRRG TDRKGSRRSKVLLIIVPIATATSAVAVSLAVFLFVRRWFKYAELREDWEIDFGPHRFS FKNLYFATEGFKNRHLLGTGGFGRVYKGFLFESKLQIAVKRVSHESRQGIREFIAEIV SIGRLRHRNIVQLLGYCRRKGELLLVYDYMPNGSLDKYLHCNSTRPSLDWNQRFRIIK GVASGLWYLHGEWEQVVIHRDVKASNVLLDEEMNARLGDFGLARLYDHGTDMQTTHLV GTIGYLAPELANTGKASPATDVFSFGIFVLEVACGRRPIEHGMNSEYKFTLVDWVIDR WHEGSLLEVMDPKLQNGYDDDEACLALKLGLLCSHPSPIARPTMWHVMQYLNHDLPFP ELMAMDMVRNQWVDSPIEYCQSVASDGTMSGLSEGR</aaseq>

Gene Sequence

<dnaseqindica>607..2651#1..112#atgcgggaccacctaagggacatttttggtaccgtgcggtaccacgcaacaccagccattggatcaggccagatccaacggccagcatttggtaccgctatggtaccgcgtggtacgttggacagtaaaaaaactctttaacaatagttcattacaaaaagagaaatcaggaaaatctagggaagtccaattaatcctgagattagatcactgcccatataatttggctgcatgaattttttgtgtgtgtctgtgtgattgaagggagcttactattaaaccctgcataggagattttctatgttctcatttgcgctactaatttgcaggtgcagtgtggaaaaactgctaactgggacacccggtcaattcaaacttagacaaaacaaagcacagctttagactctgacatgaacttcttttctttcttcgagaaagagagtgcccacctctcccatttctagtagcagactagctatttacccgtacacacttgacatgaagctatattgactgaagagcaagtgcaaccacatagcagcacactgcaacaaatgcagcttccccctgttgttaaacctcttccctgaatgatctctctctcaggttttcatagagccatgtctggcatgaaccgttcgagctttcttccactatttttcatcatcatcgtcatcaagctcggtatcggtcttcttccatccttcactacagctgtcgacgatggccagtttgtgttcaacggcttcctcaacagtagtctcaccgtcgatggagcagccatggtgctgccagggggattgctccagctgaccaatggcaccggcatgatgaaaggccatgccttccatccaactcctttccgctttcgcgaatcgcccggtacgacgctgcactccttctccgtgtccatcgtgtttggtatcatctctgcctaccgtgaggttggcacggacggcatggccttcttgatcgccccgagctctaacttctccgacgcgaatgcggcgcaacacctgggcctgttcaattacaaaaacaatggaaatatgagcaaccatgtttttgctgtcgagatcgacaccgtacgaaacaacgagtttatggacatcgacagcaaccacatcggcatcgacatcagtgatcttcgctcagtgaattcttcttcggcaggatactatgatgataacaccggtggattccagaacatgagtttgattagtggtgaggcgattcaaatttggatcgattatgatgcacgggcaatgcggattgatgtggcattggctccattcaaaatggccaaacctaccaagccactactgttgatgtcctataacctctcaatggtgctgacagatgtcgcatatgttggattgtcagcagcaactgggccactagaaacaagtcactacatcttaggctggagcttcagcatgaatggatcagctccatcattcctcacagctcagctacctgacttacctcgtagaggtacagatcgaaaaggttctcgtcggtccaaggtattgctgataattgtgcctatagcaactgccacatctgctgttgcggtgagcttggccgtcttcctctttgtgcgaaggtggtttaagtatgccgagctacgggaagattgggaaattgattttggaccacataggttctcatttaagaacctatattttgctactgaagggtttaagaataggcacctattaggtacaggagggtttggaagggtgtacaagggttttctttttgaatctaagctacagattgccgtgaagagggtgtcccatgaatcgagacaaggtataagagaatttattgcagagattgttagcatcggccgccttcggcatcgcaacatcgtgcagttacttggttattgccggcgtaaaggtgaacttctcttggtctatgactatatgccaaatggtagccttgataaatatttgcactgtaatagtacccgtcctagtttagattggaatcaacggtttcgaataatcaagggtgttgcatctggtttatggtaccttcatggagagtgggagcaagttgtcatccatagagatgtcaaagccagcaatgtgcttcttgacgaagagatgaatgcccgcttaggtgattttggccttgcaaggttatatgatcatggcaccgacatgcaaaccacacacctggttggcaccatagggtatcttgcccctgagctggcaaacacaggtaaggcttcacccgccaccgatgttttctccttcggcatatttgttcttgaggttgcttgtggacgaaggcccattgagcacggaatgaatagtgagtacaagttcacgttggtagattgggtgattgatcgttggcacgagggatcacttcttgaggtaatggatccaaagctccaaaatggatatgatgatgatgaggcatgcctagctctaaaactaggattgctttgctcacacccatcacctattgcaaggccaaccatgtggcatgtcatgcagtatcttaaccatgacttgccatttccagagttgatggcgatggacatggtgcgaaaccaatgggtggactcacctattgaatattgccaatcagtggcgagcgatggcaccatgtctggcctgtctgaagggaggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0132100, RefSeq:Os07g0132100