Os07g0202900

From RiceWiki
Revision as of 20:32, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0202900

Description

Conserved hypothetical protein

Version

NM_001065673.1 GI:115471078 GeneID:4342672

Length

5033 bp

Definition

Oryza sativa Japonica Group Os07g0202900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5553761..5558793

Sequence Coding Region

5553761..5553954,5554749..5554912,5555279..5555484,5556945..5557199,5557289..5557375
,5557816..5557988,5558134..5558242

Expression

GEO Profiles:Os07g0202900

Genome Context

<gbrowseImage1> name=NC_008400:5553761..5558793 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:5553761..5558793 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gagttcgagggcggcggcggcggagcgggaggcggcgacgaccttgatgtggagttcgagctgcccactgacccgctgcccccgacctacgacaccgcgctcgacgtcgggcccggcggccgcccactcttcgccttcaccgacaccttcgcgtccttctcccgccgcgatgccaacgcctacgtcgatttcaccttggatgaatggaaagctatgttaccagagggattgccagccggcatgatgaaggagtttcaggagacaagacggtgtgctgtgatggtgagagagagcttcctagacctacgggataacttccgaagaattgttgatccagctattgctgccaaacgaaaagatgccaaaagacaaattgtattagatggtccccggagctgcggtaaaagcattgcacttgcaatgcttgtccactgggcacgtactgaaggatggctagtattttatgttccacaagggaaggattggtcacatggaggattcttctatagaaacacctacaatgatctctttgatactccaatacaggctgcaaagatcttacaggatttcttgaagtacaatgaaaaccgcttgcagcagttaccatgtcaaatatttgagcctattcccttgggggaaggtgctggtgttggaatgatgaagggggctgacacagtggaaatgcctgaaggttcgacactgtatgatctcattcaaactgggataacacattcgcatgcttcagttggtgttgtagttcgtttaaggaaggaattgtcacttgtgaaagatgttcccgtattatttgcaattgatcagtataatagttggtttacattcagtgagttccaggaaccggtgactgttagatcatgtcggccaattcatgcaaaagagcttacaatggtcaatgtttataggccaatgctacacaatgatatgatggtaggagcattttcacattcaactgcagttggaaaattacgacaggacctcccagatgttccatcagatgctcgtgtgatgtttccacggtacactgtaaatgaagctgagactgtctgccactattatatgaggcaaaagatcatcaagcgcgaaaatttttcagaagagaagtggaaaaagatttattatttgtcaaatggaaatggctcagagatgagatggcttgctgcctttatctga</cdnaseq>

Protein Sequence

<aaseq>EFEGGGGGAGGGDDLDVEFELPTDPLPPTYDTALDVGPGGRPLF AFTDTFASFSRRDANAYVDFTLDEWKAMLPEGLPAGMMKEFQETRRCAVMVRESFLDL RDNFRRIVDPAIAAKRKDAKRQIVLDGPRSCGKSIALAMLVHWARTEGWLVFYVPQGK DWSHGGFFYRNTYNDLFDTPIQAAKILQDFLKYNENRLQQLPCQIFEPIPLGEGAGVG MMKGADTVEMPEGSTLYDLIQTGITHSHASVGVVVRLRKELSLVKDVPVLFAIDQYNS WFTFSEFQEPVTVRSCRPIHAKELTMVNVYRPMLHNDMMVGAFSHSTAVGKLRQDLPD VPSDARVMFPRYTVNEAETVCHYYMRQKIIKRENFSEEKWKKIYYLSNGNGSEMRWLA AFI</aaseq>

Gene Sequence

<dnaseqindica>1..194#989..1152#1519..1724#3185..3439#3529..3615#4056..4228#4374..4482#gagttcgagggcggcggcggcggagcgggaggcggcgacgaccttgatgtggagttcgagctgcccactgacccgctgcccccgacctacgacaccgcgctcgacgtcgggcccggcggccgcccactcttcgccttcaccgacaccttcgcgtccttctcccgccgcgatgccaacgcctacgtcgatttcacgtacgcgccgcttctcttctcccttgctgctactgtcacgattggattcgaatgcggtgatgcgcgtgttctagtttcgatttactggtttttatatgaaatctggatcttatgtggcgtttttgtgaataactcataaggcatcaagtgaaagaaaataatagttgttactagcggtagcaaacaattggttgccacgatatttacaggtaatgggattgggtaattgtatcggtgtaaataggtgcagtgctgtatgcaaatgtatttgtgcagttagaatttttttttgtttgtttcatgtctaatctaatggtggagtatgagttttgcctttacagctttacttactactcccttgattttcatgtgtggacattggccatcatttcacaaactttgaactttgacgtgatccatttcctggacataactactccctccgtcctataaaaaactagcctagtactggatgtgacacatcttagtactatgaatctggacattcatatgtcacatatggtcctaaattagttttttatgggatggaggcagtatctaaataatgtttattttacccttgttacttaagtacacttgttcttctcgaaggtgctctgcattctgcaatattttgttgtatctcttatattattatatcacaattgattcgtagagataagcaagtcggtaccataggctgtaatgaataagctaaaaatagtttctgtttcagacttaagatttctttgggtattaattcttttattttctggcatgtggccttttttcagcttggatgaatggaaagctatgttaccagagggattgccagccggcatgatgaaggagtttcaggagacaagacggtgtgctgtgatggtgagagagagcttcctagacctacgggataacttccgaagaattgttgatccagctattgctgccaaacgaaaaggtgttttgatacttttgcatgattttgtttcagttgttaagattgtacctgacgaatttgatcttcatagatcatttttatgtcattttacacatagtatgcacaacgcttgtatgatctaccttgcatacctctttgggtgtttctgagatttgcatggttagtacctgtttagtccagaataaaaactattttattggcatgttttgaatttctcttaagttgagtgcattttccttgtctaagtagtatacatatctgatataaaatactatctggtttacgcatatattgtggtaccattacattcagaatattggtttatgaacaactctcagccatgtttcctgctttaaatgtcttcagatgccaaaagacaaattgtattagatggtccccggagctgcggtaaaagcattgcacttgcaatgcttgtccactgggcacgtactgaaggatggctagtattttatgttccacaagggaaggattggtcacatggaggattcttctatagaaacacctacaatgatctctttgatactccaatacaggctgcaaagatcttacaggtgctaacctctatgtgatgtcctcatccattccccccttgctatttatggatcatggatgtgaatacaacacattacgactattttccgcaaaatttttaattagttaattcgtatatttttccctaaacttgtcaagtttttgctagtttagtttccttgactataagtattgttttgattgcatggttcacgattaattttcgtacaccaactgttttctatggtcaagtcttttgtttcacatccaatcttgtttttttattccataatttgtttctggtagagtggtggtgtccttcctcttcattttaatttccctatgatttcataaagtgggtcaacaagatgcaaaatctaagggtaacataagattgttttgcacaatttgtttgcagttcaatgttaacataagattatttgcacaatatatttgcaattcaatgtttatttactacgtgttgtgaaattattatgtggttgttgttatcatcaattaatattgttcagcagattggttatctcaattaccaattaccaataacattgataaagaaactagaatttttttccctatgccactcttattttttaatgttttggatcttccagcactttggcataattctgtatgctactgggtcatgaaaatcttgcttcttttttccacttggttggttaggcatagaagataacactttgcccgccacttaatagtcattagttactttgtacaatgctgatcttcaattcacgtggaatggggaaattgggggcaaacccatgtaaatttggccaaaactgccaaaagaacatataagtcaaatcaatgaaaagtccatctccagtgcagtccaactgaaccaaaagtttaggtgttctattgaattgaataaaagcccccaccatgaattcttttccagtggtatcagttgatggcattgctgctgggcattctctgcttttgcgcaggggtgcagctgtcttcatgtgcaaacattctgttacgctgccactggctgacaggttaggttgcatcatgaagccatggtgatctgtgtgctgaacaaatctaagcaaaggtaaaatggtggagaaggtagtagtaggcatacagccaccgtaatactaagcagagctacataatgcaaaaggcaacagtaaagaagtacacactcatttttagcgaaaactaatgcatgaaggtctttatgaatgtaaatttatgcatgttccattaggttctgtgcatgctttccttgttacccgtggatccatagattttgtattaagcacaatagtacatatgcctaatgctagagagcagactatttatgtgacaacaaatttgttgtttgtcaacagtcacatacgatgtgtagctaggagcctgttactactatataaacttgttagctaaaacaacaatttctcagcatctgattctattgatgtttcaggatttcttgaagtacaatgaaaaccgcttgcagcagttaccatgtcaaatatttgagcctattcccttgggggaaggtgctggtgttggaatgatgaagggggctgacacagtggaaatgcctgaaggttcgacactgtatgatctcattcaaactgggataacacattcgcatgcttcagttggtgttgtagttcgtttaaggaaggaattgtcacttgtgaaagatgttcccgtattatttgcaattgatcaggtacagttaatgttgaagccataccatcccatacctactacgacttctatattcgatgctcatcgaatccaatatttctttccttgcagtataatagttggtttacattcagtgagttccaggaaccggtgactgttagatcatgtcggccaattcatgcaaaagagcttacaatggttcgtttcaccctgagccactcacactatgttcaaatatttcattgtactttatttaatattatcctttgaaagtagtgaaaaaagcatattctttttgctttcttggttgggatggtctagaaacttagttgatgtgtaggttatctggatctgggatacatagttataatttactaggaattcacatatgatgtgctcgtggttctaatatgggtaacagaattaatattcccaacttgtcatcgtgctcgtcatacatcacaacagttttttttactccattatttaaccagctgtttatagttggaatcctacactaattatgtgacatgtagtcctgcgatatgtttttctcttcttggtttgattcatacttttacactggtatgaatataattattttgttatattgaatgtttcgctcactacttcaacaggtcaatgtttataggccaatgctacacaatgatatgatggtaggagcattttcacattcaactgcagttggaaaattacgacaggacctcccagatgttccatcagatgctcgtgtgatgtttccacggtacactgtaaatgaagctgagactgtctgccactattatatgaggtatacttagtataaaatcttcataaatttatgtactgatggcgttggatttctctgtcatgatttgcattgacatgtatttacgcaaccttccaagtttgttccttttacaaaccatgaacattgcaaattttttgttggccaggcaaaagatcatcaagcgcgaaaatttttcagaagagaagtggaaaaagatttattatttgtcaaatggaaatggctcagagatgagatggcttgctgcctttatctgagttctgaggtagggaactctcgacattacttactcaggaatgatctgcaatcacataacttggtgcatcagcttttggatgagatttgcccttcatttgaaatcccttgcaagtaattccctcttcttgtttgcacctttccgtgcagtttctcatacccggattgcttctgccaaagaaaaaaaaccaattgagttcaagcaggctgtgcaggttttaaactgaagccatccattgttgtatacttgcagtacacatcttgtaaaactcgtaggagcaaggtgctacctaatgacggttctatgatttttttatttctaccccagtaatttgaagtgcgagcaattttggcagcagcataaaaatttcacccatgtgcctgacgacgacgttgatgtgtactgagtaggaatgtagtaggattcactcaacaagccagaactcaagtttgtgacgcagttctgcccatttatatttgatgaattttgaggtgcgttgcttagtgacgcaggatacaataagaactggctgctcttaactttctttctggt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0202900, RefSeq:Os07g0202900