Os07g0498400

From RiceWiki
Revision as of 20:36, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0498400

Description

Protein kinase-like domain containing protein

Version

NM_001066245.2 GI:297607263 GeneID:4343304

Length

3917 bp

Definition

Oryza sativa Japonica Group Os07g0498400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19348550..19352466

Sequence Coding Region

19348550..19348905,19348995..19352466

Expression

GEO Profiles:Os07g0498400

Genome Context

<gbrowseImage1> name=NC_008400:19348550..19352466 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:19348550..19352466 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggcgcggcggcgattcttcccggcgtgggtggtggtagtaatggtggtggtggtggttcttggttcttgctcggcggcggcggcggcgggggatggtgatgcgctgatggatgtgaagaatgcgttcgtggaggatcccggcggcgttctggcgggatggggcggcggtggcggaaactcgtcggcgttctgttcttgggcgggggtggagtgcgacgcggcgggggcgagggtgaccgggctgaacctgtccggcgccgggctggccggggaggtccccggcgcggcgctggcgcggctggaccggctggaggtggtcgacctgtcttcgaacaggctcgccggcccggtgccggcggcgctcggggcgctcgggaggctcacggcgctgctgctctactccaaccgcctcgccggcgagctcccgccgtcgctgggcgcgctcgccgcgctccgggtgctccgcgtcggcgacaacccggcgctgtcgggccccatccccgccgcgctcggcgtgctcgccaacctcaccgtgctcgccgccgcgtcgtgcaacctcaccggcgccatcccgaggagcctcgggaggctcgcggcgctcacggcgctgaacctgcaggagaactccctgtccgggccgataccgccggagctcggcggcatcgccgggctcgaggtgctctcgctcgccgacaaccagctcaccggcgtgatcccgccggagctcgggaggctcgccgcgctccagaagctgaacctggcgaacaacacgctggagggcgccgtgccgccggagctcgggaagctcggcgagctcgcgtacctcaacctcatgaacaaccgcctctccgggcgagtcccgcgcgagctcgccgcgctctcccgcgcgcgcaccatcgacctgtccggcaacctgctcaccggcgaactccccgccgaggtcggccagctgccggagctcagcttcctcgcgctctccggcaaccaccttaccggccgcatccctggcgacctgtgcggcggcggcggcggtggagcagagtccacgagcctcgagcacctaatgctctcgacgaacaacttctccggcgagataccgggggggctctcgcggtgccgggcgctgacgcagctcgacctggcgaacaacagcctcaccggcgtgatcccggcggcgctcggcgagctcggcaacctgacggacctgctgctcaacaacaacaccctctccggcgagctcccgccggagctcttcaacctcaccgagctcaaggtcctcgcattgtatcacaatgggctcaccggccggctgccggacgccgtcggccgcctcgtgaacctcgaggtgctcttcctgtacgagaacgacttctccggcgagataccggagacgatcggggagtgctcgagcttgcagatggttgatttcttcgggaaccggttcaacggcagcttgccggcgtccatcgggaagctctccgagctggcgttcctccatctccggcagaacgagctgtccggccggatcccgccggagctcggcgactgcgtgaacctcgccgtcctcgacctagccgacaacgcgctctccggcgagatcccggcgacgttcgggaggctccggtcgctggagcagctcatgctgtacaacaactcgctcgccggcgacgtccccgacggcatgttcgagtgccggaacatcacccgcgtcaacatcgcgcacaaccggctcgccggcggcctcctgccgctctgcggctcggcgaggctcctgtcgttcgacgccaccaacaactccttctccggcggcatcccggcgcagctcggccggtcgcggtcgctccagcgcgtccgcttcgggagcaacgcgctgtccggcccgatcccggcggcgctcggcaacgccgccgcgctgacgatgctcgacgcgtcggggaacgcgctcaccggcggcatcccggacgcgctcgcgcggtgcgcgcggctcagccacatcgccctcagcggcaaccggctgtccggccccgtgccggcgtgggtcggcgcgctgccggagctcggcgagctggcgctctccggcaacgagctcaccgggccggtgcccgtccagctcagcaactgctccaagctcatcaagctctcgctcgacggcaaccagatcaatggaacagtgccatcggagatcggcagcttggtctcgctcaacgtgctcaacctggccggcaaccagctctccggcgagattccggctaccctcgcgaagctgatcaacctgtacgagctgaacctgtcgcggaatctcttgtccggcccgatccctcccgacattggccagctgcaagagctgcagagcttgctggatttgagcagcaacgatctcagcggcagcatcccggcgtcgctcgggtcgctctccaagctggagagcttgaatctctcccacaacgcgctcgccggagctgtgccgccgcagctcgccgggatgagcagcttggtgcagctggatttgtccagcaaccagctgcaggggaggctggggagcgagttctcgcggtggccgcgtggcgcgttcgccggcaacgcgcggctctgcggccacccgctggtgagctgcggcgtcggcggcggcggccggtcggcgctgcggtcggcgacgatcgcgctggtgtcggcggcggtgacgctgtcggtggtgctgctggtgatcgtgctcgtgctgatcgcggtgcggcggcggcggtccggggaggtgaactgcacggcgttctcgtcgagcctcggcggtggcggcaacaacacgaacgggcggcagctggtggtgaaggggtcggcgcggcgggagttccggtgggaggcgatcatggaggcgacggcgaacctgagcgaccagttcgccatcggctccggcgggtccgggacggtgtaccgggccgagctccccaccggcgagacggtggccgtgaagcggatcgcgcacatggacagcgacatgctcctccacgacaagagcttcgcgagggaggtcaagatcctcggccgcgtccgccaccgccacctcgtcaagctcctcggcttcgtcgccagccacgacgtcggcggcggcggcggcggcggcggcagcatgctcgtctacgagtacatggagaacggcagcctgtacgactggctacacggcatcgccgccggtggcggcggcggcggcgacggcgagcgcaagaagcgcgtgctgagctgggacgcgcggctgaaggtcgccgccgggctggcgcagggcgtcgagtacctccaccacgactgcgtcccccgcgtcgtccaccgcgacattaagtccagcaacgtcctcctcgacggcgacatggaggcgcacctcggcgacttcggcctcgccaagtccgtcgccgacaaccgcaaggacttcaccgactccgcctcctgcttcgccggctcctacggctacatggccccagagtgcggatacagcttgaagacgacggagaagagcgacgtgtacagcatggggatcgtgatgatggagctggtgaccgggctgacgccgacggacaaggcgttcggcggcgacgtggacatggtgcggtgggtgcagtcgagggtggaggcgccgtcgccggggcgggagcaggtgttcgacccggcgctgaagccgctggcgccgcgggaggagtcgtcgatgacggaggtgctggaggtggcgctccggtgcacgaggacggcgccgggggagaggcccacggcgaggcaggtgtccgacctgctgctccacgtctcgctcgattactatcgagccggcgagcacaagcgctag</cdnaseq>

Protein Sequence

<aaseq>MMARRRFFPAWVVVVMVVVVVLGSCSAAAAAGDGDALMDVKNAF VEDPGGVLAGWGGGGGNSSAFCSWAGVECDAAGARVTGLNLSGAGLAGEVPGAALARL DRLEVVDLSSNRLAGPVPAALGALGRLTALLLYSNRLAGELPPSLGALAALRVLRVGD NPALSGPIPAALGVLANLTVLAAASCNLTGAIPRSLGRLAALTALNLQENSLSGPIPP ELGGIAGLEVLSLADNQLTGVIPPELGRLAALQKLNLANNTLEGAVPPELGKLGELAY LNLMNNRLSGRVPRELAALSRARTIDLSGNLLTGELPAEVGQLPELSFLALSGNHLTG RIPGDLCGGGGGGAESTSLEHLMLSTNNFSGEIPGGLSRCRALTQLDLANNSLTGVIP AALGELGNLTDLLLNNNTLSGELPPELFNLTELKVLALYHNGLTGRLPDAVGRLVNLE VLFLYENDFSGEIPETIGECSSLQMVDFFGNRFNGSLPASIGKLSELAFLHLRQNELS GRIPPELGDCVNLAVLDLADNALSGEIPATFGRLRSLEQLMLYNNSLAGDVPDGMFEC RNITRVNIAHNRLAGGLLPLCGSARLLSFDATNNSFSGGIPAQLGRSRSLQRVRFGSN ALSGPIPAALGNAAALTMLDASGNALTGGIPDALARCARLSHIALSGNRLSGPVPAWV GALPELGELALSGNELTGPVPVQLSNCSKLIKLSLDGNQINGTVPSEIGSLVSLNVLN LAGNQLSGEIPATLAKLINLYELNLSRNLLSGPIPPDIGQLQELQSLLDLSSNDLSGS IPASLGSLSKLESLNLSHNALAGAVPPQLAGMSSLVQLDLSSNQLQGRLGSEFSRWPR GAFAGNARLCGHPLVSCGVGGGGRSALRSATIALVSAAVTLSVVLLVIVLVLIAVRRR RSGEVNCTAFSSSLGGGGNNTNGRQLVVKGSARREFRWEAIMEATANLSDQFAIGSGG SGTVYRAELPTGETVAVKRIAHMDSDMLLHDKSFAREVKILGRVRHRHLVKLLGFVAS HDVGGGGGGGGSMLVYEYMENGSLYDWLHGIAAGGGGGGDGERKKRVLSWDARLKVAA GLAQGVEYLHHDCVPRVVHRDIKSSNVLLDGDMEAHLGDFGLAKSVADNRKDFTDSAS CFAGSYGYMAPECGYSLKTTEKSDVYSMGIVMMELVTGLTPTDKAFGGDVDMVRWVQS RVEAPSPGREQVFDPALKPLAPREESSMTEVLEVALRCTRTAPGERPTARQVSDLLLH VSLDYYRAGEHKR</aaseq>

Gene Sequence

<dnaseqindica>3562..3917#1..3472#atgatggcgcggcggcgattcttcccggcgtgggtggtggtagtaatggtggtggtggtggttcttggttcttgctcggcggcggcggcggcgggggatggtgatgcgctgatggatgtgaagaatgcgttcgtggaggatcccggcggcgttctggcgggatggggcggcggtggcggaaactcgtcggcgttctgttcttgggcgggggtggagtgcgacgcggcgggggcgagggtgaccgggctgaacctgtccggcgccgggctggccggggaggtccccggcgcggcgctggcgcggctggaccggctggaggtggtcgacctgtcttcgaacaggctcgccggcccggtgccggcggcgctcggggcgctcgggaggctcacggcgctgctgctctactccaaccgcctcgccggcgagctcccgccgtcgctgggcgcgctcgccgcgctccgggtgctccgcgtcggcgacaacccggcgctgtcgggccccatccccgccgcgctcggcgtgctcgccaacctcaccgtgctcgccgccgcgtcgtgcaacctcaccggcgccatcccgaggagcctcgggaggctcgcggcgctcacggcgctgaacctgcaggagaactccctgtccgggccgataccgccggagctcggcggcatcgccgggctcgaggtgctctcgctcgccgacaaccagctcaccggcgtgatcccgccggagctcgggaggctcgccgcgctccagaagctgaacctggcgaacaacacgctggagggcgccgtgccgccggagctcgggaagctcggcgagctcgcgtacctcaacctcatgaacaaccgcctctccgggcgagtcccgcgcgagctcgccgcgctctcccgcgcgcgcaccatcgacctgtccggcaacctgctcaccggcgaactccccgccgaggtcggccagctgccggagctcagcttcctcgcgctctccggcaaccaccttaccggccgcatccctggcgacctgtgcggcggcggcggcggtggagcagagtccacgagcctcgagcacctaatgctctcgacgaacaacttctccggcgagataccgggggggctctcgcggtgccgggcgctgacgcagctcgacctggcgaacaacagcctcaccggcgtgatcccggcggcgctcggcgagctcggcaacctgacggacctgctgctcaacaacaacaccctctccggcgagctcccgccggagctcttcaacctcaccgagctcaaggtcctcgcattgtatcacaatgggctcaccggccggctgccggacgccgtcggccgcctcgtgaacctcgaggtgctcttcctgtacgagaacgacttctccggcgagataccggagacgatcggggagtgctcgagcttgcagatggttgatttcttcgggaaccggttcaacggcagcttgccggcgtccatcgggaagctctccgagctggcgttcctccatctccggcagaacgagctgtccggccggatcccgccggagctcggcgactgcgtgaacctcgccgtcctcgacctagccgacaacgcgctctccggcgagatcccggcgacgttcgggaggctccggtcgctggagcagctcatgctgtacaacaactcgctcgccggcgacgtccccgacggcatgttcgagtgccggaacatcacccgcgtcaacatcgcgcacaaccggctcgccggcggcctcctgccgctctgcggctcggcgaggctcctgtcgttcgacgccaccaacaactccttctccggcggcatcccggcgcagctcggccggtcgcggtcgctccagcgcgtccgcttcgggagcaacgcgctgtccggcccgatcccggcggcgctcggcaacgccgccgcgctgacgatgctcgacgcgtcggggaacgcgctcaccggcggcatcccggacgcgctcgcgcggtgcgcgcggctcagccacatcgccctcagcggcaaccggctgtccggccccgtgccggcgtgggtcggcgcgctgccggagctcggcgagctggcgctctccggcaacgagctcaccgggccggtgcccgtccagctcagcaactgctccaagctcatcaagctctcgctcgacggcaaccagatcaatggaacagtgccatcggagatcggcagcttggtctcgctcaacgtgctcaacctggccggcaaccagctctccggcgagattccggctaccctcgcgaagctgatcaacctgtacgagctgaacctgtcgcggaatctcttgtccggcccgatccctcccgacattggccagctgcaagagctgcagagcttgctggatttgagcagcaacgatctcagcggcagcatcccggcgtcgctcgggtcgctctccaagctggagagcttgaatctctcccacaacgcgctcgccggagctgtgccgccgcagctcgccgggatgagcagcttggtgcagctggatttgtccagcaaccagctgcaggggaggctggggagcgagttctcgcggtggccgcgtggcgcgttcgccggcaacgcgcggctctgcggccacccgctggtgagctgcggcgtcggcggcggcggccggtcggcgctgcggtcggcgacgatcgcgctggtgtcggcggcggtgacgctgtcggtggtgctgctggtgatcgtgctcgtgctgatcgcggtgcggcggcggcggtccggggaggtgaactgcacggcgttctcgtcgagcctcggcggtggcggcaacaacacgaacgggcggcagctggtggtgaaggggtcggcgcggcgggagttccggtgggaggcgatcatggaggcgacggcgaacctgagcgaccagttcgccatcggctccggcgggtccgggacggtgtaccgggccgagctccccaccggcgagacggtggccgtgaagcggatcgcgcacatggacagcgacatgctcctccacgacaagagcttcgcgagggaggtcaagatcctcggccgcgtccgccaccgccacctcgtcaagctcctcggcttcgtcgccagccacgacgtcggcggcggcggcggcggcggcggcagcatgctcgtctacgagtacatggagaacggcagcctgtacgactggctacacggcatcgccgccggtggcggcggcggcggcgacggcgagcgcaagaagcgcgtgctgagctgggacgcgcggctgaaggtcgccgccgggctggcgcagggcgtcgagtacctccaccacgactgcgtcccccgcgtcgtccaccgcgacattaagtccagcaacgtcctcctcgacggcgacatggaggcgcacctcggcgacttcggcctcgccaagtccgtcgccgacaaccgcaaggacttcaccgactccgcctcctgcttcgccggctcctacggctacatggccccaggtaaaaaccaaacttccgttgtgtcaattgctcgccaccatgtccatgtcgcggacgccattgatgggcatcttggatcttgcgcgcagagtgcggatacagcttgaagacgacggagaagagcgacgtgtacagcatggggatcgtgatgatggagctggtgaccgggctgacgccgacggacaaggcgttcggcggcgacgtggacatggtgcggtgggtgcagtcgagggtggaggcgccgtcgccggggcgggagcaggtgttcgacccggcgctgaagccgctggcgccgcgggaggagtcgtcgatgacggaggtgctggaggtggcgctccggtgcacgaggacggcgccgggggagaggcccacggcgaggcaggtgtccgacctgctgctccacgtctcgctcgattactatcgagccggcgagcacaagcgctag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0498400, RefSeq:Os07g0498400