Os07g0516000

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os07g0516000

Description

Sialidase domain containing protein

Version

NM_001066314.1 GI:115472360 GeneID:4343377

Length

3489 bp

Definition

Oryza sativa Japonica Group Os07g0516000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20511142..20514630

Sequence Coding Region

20512087..20512280,20512356..20512557,20512639..20512725,20512810..20512937,20513069..20513163
,20513377..20513456,20513552..20513777,20513997..20514220,20514330..20514368

Expression

GEO Profiles:Os07g0516000

Genome Context

<gbrowseImage1> name=NC_008400:20511142..20514630 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:20511142..20514630 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcaccatttactggtgcagcaggcaaaaagttgcatggagcgctacaggctgtacacttttgatttccctgctgttctttttctctggttcaccgcataggatcctcttgaacaagaaacctctcaatttcaaaacagcaccatctaggttattgcgtgagattagcatcagttcaagtcgtgttcagagggttaacaattcatccgcggagtttgttgcaaacctgaatgaccgtaatgtagaaattgtacaacatatggaagacaacgatcataacatcatcaatgcaactgcaaatgtgacttctgactggagcattgtcaaggaggaattcacatttccagctggaagtgcccctttcaatagctgccatgcttctactattgtagagactgagaaggatagttttttggtggcttatttcggtggatccaaggaaggtgctcctgatgtgaagatctggctgcagagatacagtgatggctgctggcatactccacaagtggctgatgaacaggatgaggtacctatgtggaatcctgttctgtttcagctcccttctcatgagcttcttctcttctacaagattggccaagaagttcagaagtggagtggtgccatgaaaagatctctagatggaggaaaaacctggtcggcaagagaacagctaccacctggcatccttggtcctattaagaataagcctttcttggttgaagatgggcgcttgctatgtgggtcatctgttgaaagctggaactcttggggtgcatggcttgaggtcacaaaagatgccggacgaacatggcggaagtatggccctatatatattgaaggcgaaacactaggggtgatccagccagttccctacatgactgccaatgggactattcgagtgttgctgcgatcttttgagacaattggtcgtgtctgcatggctgattctgctgatgggggtgtaacatggagttatgtgcacgagactgaccttcctaacccaaactctgggattgatggagttaagatgaaggatgggagagtactccttgcttacaacaccttctccagaggaacactaaaagttgcagtctccatggatgatggtgattcatggaacgatgtaatgacattggaagatactgaaggcatggagttttcatatcctgcagtgatccagaccatggatgatctcatacatatcacgtacacatacaaccggacacaaattaagcatgttgttcttcaacctagcgggaaagtgaggtggtga</cdnaseq>

Protein Sequence

<aaseq>MVTIYWCSRQKVAWSATGCTLLISLLFFFSGSPHRILLNKKPLN FKTAPSRLLREISISSSRVQRVNNSSAEFVANLNDRNVEIVQHMEDNDHNIINATANV TSDWSIVKEEFTFPAGSAPFNSCHASTIVETEKDSFLVAYFGGSKEGAPDVKIWLQRY SDGCWHTPQVADEQDEVPMWNPVLFQLPSHELLLFYKIGQEVQKWSGAMKRSLDGGKT WSAREQLPPGILGPIKNKPFLVEDGRLLCGSSVESWNSWGAWLEVTKDAGRTWRKYGP IYIEGETLGVIQPVPYMTANGTIRVLLRSFETIGRVCMADSADGGVTWSYVHETDLPN PNSGIDGVKMKDGRVLLAYNTFSRGTLKVAVSMDDGDSWNDVMTLEDTEGMEFSYPAV IQTMDDLIHITYTYNRTQIKHVVLQPSGKVRW</aaseq>

Gene Sequence

<dnaseqindica>946..1139#1215..1416#1498..1584#1669..1796#1928..2022#2236..2315#2411..2636#2856..3079#3189..3227#aagccttgccggcttctcttctctcccatcacactcgaggccacgcctccaccgccgccaccacctcctcctcctcctcgtcggcgtcgccgccgccggcgtcttctccacctcctccgcgccgcgctcgcaaccaccttccaggtcagtcagcgcggccgcgtttcgtcatgcttttggaccactctgtcgtagcccgtagcccctagccccagtaggcggcagtggtggaacactcgccgccgccatgattttttttttttttttttgctcccgggtaatgtggtgcgctggctaattaaggagcagttcgaggttgggggggaggagtagctgaagagttgttgtgttctaggaagaggagcgtgtgggtgtgcagtgctagtagaaatcaggccacgcagattagcatccgctgcgttcctggtcttttagcttgatgatgagctattgcagctttgaggaagaggaggtcccgtttctgtggaaggaaatttcggtttatggaactgtgttccatggcgtgggatactggagtgtttgggggaagattgtgatccaactttgtttttagtgatggatgtgatgtgctcaggctcagcaattaggaaaatacattgtcaagtacagtttgttattctgccaatttcaagtaagtatggaagcagatcagagagaccaggaggtccatgccatttttttacttggatttctctgattgttgaggaaaccagatggctagctttgtttgttcgtcagtacaaattccttctaattgaaaattttgtggttcttgtttctgtttgatgcaactatcttgctttctttcccctgcacattgcattgtactgacctgtttcttttcattccattctgtagattggatgggactataactgaaaccttctgtattaagcttccgcgagggctcacctgcagaacgtgatggtcaccatttactggtgcagcaggcaaaaagttgcatggagcgctacaggctgtacacttttgatttccctgctgttctttttctctggttcaccgcataggatcctcttgaacaagaaacctctcaatttcaaaacagcaccatctaggttattgcgtgagattagcatcagttcaagtcgtgttcagaggtaagttctaaattgagtttctgtagcctcgtgaaggattactacccagagttctaatcttttgtgtttaaaaagggttaacaattcatccgcggagtttgttgcaaacctgaatgaccgtaatgtagaaattgtacaacatatggaagacaacgatcataacatcatcaatgcaactgcaaatgtgacttctgactggagcattgtcaaggaggaattcacatttccagctggaagtgcccctttcaatagctgccatgcttctactattgtagaggtatatgacttctggatacaagtttattttgggtaaaaatgtactataagttacttatagattaattttgtctttttttagactgagaaggatagttttttggtggcttatttcggtggatccaaggaaggtgctcctgatgtgaagatctggctgcagagatacagtgtgggttcgatcatccgggatacttccatttcttattttctttactcagaaaagcggttattcttaagaaccttacctttgtaggatggctgctggcatactccacaagtggctgatgaacaggatgaggtacctatgtggaatcctgttctgtttcagctcccttctcatgagcttcttctcttctacaagattggccaagaagttcagaagtatgaacatgttttatgttatttaatttcttatctcttattcaaatgacaaaaaaaccatatgatagtgcaaaaattgaatgcgactatatgattatttgatattctgatgctcaatataacatgttcaggtggagtggtgccatgaaaagatctctagatggaggaaaaacctggtcggcaagagaacagctaccacctggcatccttggtcctattaagaataaggcatgtctaaatctgtggtgtattgccttccatcttagcaaagcacattgtaaccataaaataaggaaaatattgtcaacctgaatacatatggcagcacaatcattatgggttattaacaagtcagtactcagtagtaatttaattgcctttccattgtgattctcaaaagtttattgatttggttcctgaatggcattttctccaatgtagcctttcttggttgaagatgggcgcttgctatgtgggtcatctgttgaaagctggaactcttggggtgcatggcttgaggtatccattacattgaaaataaaaaaaatcatagactgaactcatgcgtctcacattatgtgtagtggaagttttaattactcttatcaacttaggtcacaaaagatgccggacgaacatggcggaagtatggccctatatatattgaaggcgaaacactaggggtgatccagccagttccctacatgactgccaatgggactattcgagtgttgctgcgatcttttgagacaattggtcgtgtctgcatggctgattctgctgatgggggtgtaacatggagttatgtgcacgagactgaccttcctaacccaaactctggtttgttcatctcctagctaaattagttttctctttgcttcagtacccttgtatagaatagcaaatcctcgaatgctcattagtgaccactgagcactgaacatctgctggtgctgggaacacattattaaacagtttgaagtttccaaaaattttaagatatactgatagatttctgaagaatattaataactctctctctcgacttcaaacctgaagggattgatggagttaagatgaaggatgggagagtactccttgcttacaacaccttctccagaggaacactaaaagttgcagtctccatggatgatggtgattcatggaacgatgtaatgacattggaagatactgaaggcatggagttttcatatcctgcagtgatccagaccatggatgatctcatacatatcacgtacacatacaaccggacacaaattaaggtaatctttctgatgcatattcaaaagaaaatatcgatcttgttttccatcaagaacagttttctgcccgttagtaccttttttaatagtattattgaatgattcacagcatgttgttcttcaacctagcgggaaagtgaggtggtgagtgtgcaactattgggagagttattgctgccaattgcaaggcacgcaagtttttctctatgtgtgtcacatcatattggctggaccgtggtgctaaattggtcatcaatgattctttttttgggtatatttggtcatttgcataatttcttgcaattgtaacctaattaataatctccctgattcctatcaacaatgatattgaacatctgtacatatgccccaaagtttaacataagttgttccgtatatggctgttcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0516000, RefSeq:Os07g0516000