Os07g0557400

From RiceWiki
Revision as of 20:38, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0557400

Description

Delayed-early response protein/equilibrative nucleoside transporter family protein

Version

NM_001066502.1 GI:115472736 GeneID:4343575

Length

2566 bp

Definition

Oryza sativa Japonica Group Os07g0557400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22904083..22906648

Sequence Coding Region

22904858..22904902,22904982..22905160,22905302..22905407,22905534..22905677,22905761..22905916
,22906011..22906115,22906220..22906282,22906496..22906528

Expression

GEO Profiles:Os07g0557400

Genome Context

<gbrowseImage1> name=NC_008400:22904083..22906648 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:22904083..22906648 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcagctcttcctcctacagcgcgatcccaggcgatcaaagtgagctaatcacaggatgtgatgaagatgaccatggattagccaaaaccaaggggaagaattggggaattttcatctgctggctcctcggaaatggatgcctcttcgggttcaatggcatggttacaatcgaagattactatgtttacctcttcccgaattaccatcctacaagaatgatcactctcgtttatcagccattcgtcctcaccacaacagctctgttcgcatatcacgaggcaaagatcaacactaggatgcgcaacttggctagatatatgctgttcttcctgagctcatttggagtgatcgttctagacgttgcatcttcaggaagaggagggattgcaccgttcgttggtttgtgtctgatcgccgcggctttcggcgttgcagacggccatgttcagggtgggatgactggagacctgtccttgatgtgcccggaattcatccagtcgttctttgctggcattgctgcatcgggtgcaataacctctgcattgaggttcttgacaaaagcaatttttgagaactccaaagatggccttcgcaaaggagctatgatgttctcctcgatagcatgcttcttcgagcttctgtgtgtcatactctacgccttcgtcttcccaaagctgccaatcatgaagttctaccgcacaaaggctgcttccgaggggtctctgacggtcactgctgacctcgctgccggtggcatcaaaagtcagccagaaaatcctttggatgaagaagaccaggctttcgcagaacgattaagcaacagatag</cdnaseq>

Protein Sequence

<aaseq>MGSSSSYSAIPGDQSELITGCDEDDHGLAKTKGKNWGIFICWLL GNGCLFGFNGMVTIEDYYVYLFPNYHPTRMITLVYQPFVLTTTALFAYHEAKINTRMR NLARYMLFFLSSFGVIVLDVASSGRGGIAPFVGLCLIAAAFGVADGHVQGGMTGDLSL MCPEFIQSFFAGIAASGAITSALRFLTKAIFENSKDGLRKGAMMFSSIACFFELLCVI LYAFVFPKLPIMKFYRTKAASEGSLTVTADLAAGGIKSQPENPLDEEDQAFAERLSNR </aaseq>

Gene Sequence

<dnaseqindica>1747..1791#1489..1667#1242..1347#972..1115#733..888#534..638#367..429#121..153#aatctttctttaatccttggctccttgcatcctcgtcttcttcctctcttcttttgtttgttccttcaaaaattccccttccagtattcagttcttgtctcctccctcttgttatgaccgatgggcagctcttcctcctacagcgcgatcccagttaagttcttactccacttttgacaaatcagtctcttcgttggtcatgaactcatgatgttctgcatctagtatcttggttcttgctaccagttcagaaaacaagaacagagttacagaagcatgaagttctatgagatactgctctgaaagtagtattattcgtgtgatatctttggagtacttcttagtggttgctttcttgatctgtagggcgatcaaagtgagctaatcacaggatgtgatgaagatgaccatggattagccaaaaccaaggtttgcatctagccaccaaaactgaaacagattcttacagaaggtttcagagcatcctcaccttctcaaaattttgtctgaaacattgggggtgctgatgataggggaagaattggggaattttcatctgctggctcctcggaaatggatgcctcttcgggttcaatggcatggttacaatcgaagattactatgtttacctcttcccggtactgcaaaatctgcctaaaattattactggtggaacaggatgttacttacacctgactgaatatatggatgcattctgatttctgaattcagaattaccatcctacaagaatgatcactctcgtttatcagccattcgtcctcaccacaacagctctgttcgcatatcacgaggcaaagatcaacactaggatgcgcaacttggctagatatatgctgttcttcctgagctcatttggagtgatcgttgtaagcctagctgagtatcatctgtcactgtcagaaaagagagtacttctgaacctgaattatatccgttcgttgtgtggcagctagacgttgcatcttcaggaagaggagggattgcaccgttcgttggtttgtgtctgatcgccgcggctttcggcgttgcagacggccatgttcagggtgggatgactggagacctgtccttgatgtgcccggaattcatccaggtcataaattttcagacaagcttagtaacagaagttcattcattagctaaagacattcgatcaaaaagttctgttacaaaaaatatgctgcaattgcttcatgtttgtcgtgtttggaattttcagtcgttctttgctggcattgctgcatcgggtgcaataacctctgcattgaggttcttgacaaaagcaatttttgagaactccaaagatggccttcgcaaaggagctagtaagttttcaaacattcagagatgctgtcttttttttactaaattcagatatacattgtttacattgtgatatacttaatacttatatgcgcaatgtgatccttgattactgatatatccttttggcaaatcgatggcagtgatgttctcctcgatagcatgcttcttcgagcttctgtgtgtcatactctacgccttcgtcttcccaaagctgccaatcatgaagttctaccgcacaaaggctgcttccgaggggtctctgacggtcactgctgacctcgctgccggtggcatcaaaagtcagccagaaaatcctttggtatgcaattcgagcaagcaatcatgctcaggttgaaaagagatgataccattctgaacttgtgccatgaatttatcaggatgaagaagaccaggctttcgcagaacgattaagcaacagatagctgctaaatcagaacatggactacgctctggacgtgttcatgatctatgtcctcacactgtcaatcttcccgggctttctggctgaagacaccgggacacacagcttgggttcttggtactagttactgacctactaatctctgaaaaaattcagtaacttttttgctagtgccatgcataaattcatcactcaaatttgaaaaattcaggtatgcgcttgtgctgatcgcaacgttcaatgtgtccgacctgatcgggagatacatgccactgatcgagcagatcaagctgacatccaggaaatggctgctaatcgcagtcgttgcaaggttcttgttcgtccctgcgttctacttcacggtgaagtattgtgacgagggctgggtgatcatgctaacgtcgtttcttgggttgagcaatgggcatctcaccgtttgtgtcatcactgaggcgcccagaggctataaggtttggtctctgaattttctgaaccatctctatgttggttgattgggctcaagttgtgtgcatgatttttttgcagggacctgaacagaatgctttgggcaatatgcttgtgttcttcctcttggcgggcatattttgtggggttgttcttgactggatgtggctcataggcaaagggtggtgataaaaaaatgtttttgtttttgcatgtacaggaaatctgaatattcgacatcattgtaaaacacgaaaatgataatcaattgtgatattatatcaaatcagaaagaaacaacattaagcatt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0557400, RefSeq:Os07g0557400