Os07g0575900

From RiceWiki
Revision as of 20:38, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0575900

Description

Protein of unknown function DUF946, plant family protein

Version

NM_001066617.1 GI:115472966 GeneID:4343701

Length

2248 bp

Definition

Oryza sativa Japonica Group Os07g0575900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23959731..23961978

Sequence Coding Region

23960245..23961813

Expression

GEO Profiles:Os07g0575900

Genome Context

<gbrowseImage1> name=NC_008400:23959731..23961978 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23959731..23961978 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgactggcctttctgaattttcagtttcagatggaggatttgcaaagggtagcattgaccttggtggtctagaggtgcgccaagtcaccacgtttgccaaggtctggtccaccggccaagacggcggcggcgccaccttcttcaggccggagcaggtccccgccggcttcagcgccctcggccactacgcgcagcgcaacgaccggccgctcttcggccacgtcctcgtcgcccgcgacgtctccggcggcgggctccttgccccgccgctggactacgcgcccgtctggtccagccaggacgacgccgcccacttctggctccccacgcctcccgatggctacagggcgatcggcgtcgcggtcacggcctcgccggacaagccgccgcgcgacgaggtcgcgtgcgtccgcgccgacttcaccgacgcgtgcgaggcggaggcgacggtgtgggacaaggacgggttcagcgccgtcgccctgaggccggcggttcgcggcgtggacgcccgcggcgtgcacgccggcacgttcgtcctcgccaggagcgacgcgacggcggcgagcgcgtcggcgctggcgtgcctcaagaacaacggcgcggcgtacacgtcctgcatgcccgacctcgcccaggtgaacgcgctcctcgccgcctacgcgccgcagctgttcctccaccccgacgagccctacctgccgtcgtcggtgacgtggttcttccagaacggcgcgctgctgtaccagaagggtagccagaccccgacgccggtcgccgccgacgggtcgaacctcccgcagggcggcggcaacgacggcgggtactggctcgacctgccggtggacaacttccagagggagcgggtcaagaagggcgacctcgccggcgcgaaggtgtacgtgcaggcgaagccgatgctgggcgcgacggcgaccgacctcgccgtgtggttcttctacccgttcaacggcccggcgagggcgaaggtggggcccctcaccatcccgctcggcaagatcggcgagcacgtcggcgactgggagcacgtgaccctccgcgtgagcaacttctccggcgagctcctccgcatgtacttctcgcagcacagcgcgggcgcgtgggtggacgcgccgcagctcgagtacctcgacggcgggaaccggccgtcggcgtactcgtcgctgcacgggcacgcgctgtacccgagggcagggctggtgctgcagggcgacgcgaggctgggcgtcgggatacgcaacgactgcgacagggggagcaggctggacaccggcggcgccgggcggtgcgaggtggtgtcggcggagtacctcggcggcggcggcggcggcgtggccgagccgacgtggctgctgttcgaccgggagtgggggccgagggaggagtacgacatcggccgcgagatcaaccgcgtggcgaagctgctgccgcggtcgacgagggagcggctgcggaagctcgtcgagagcgtcttcgtcggcgagggcccgacggggccgaggatgaagggcagctggagaaacgacgagagggaggccaagtaa</cdnaseq>

Protein Sequence

<aaseq>MLTGLSEFSVSDGGFAKGSIDLGGLEVRQVTTFAKVWSTGQDGG GATFFRPEQVPAGFSALGHYAQRNDRPLFGHVLVARDVSGGGLLAPPLDYAPVWSSQD DAAHFWLPTPPDGYRAIGVAVTASPDKPPRDEVACVRADFTDACEAEATVWDKDGFSA VALRPAVRGVDARGVHAGTFVLARSDATAASASALACLKNNGAAYTSCMPDLAQVNAL LAAYAPQLFLHPDEPYLPSSVTWFFQNGALLYQKGSQTPTPVAADGSNLPQGGGNDGG YWLDLPVDNFQRERVKKGDLAGAKVYVQAKPMLGATATDLAVWFFYPFNGPARAKVGP LTIPLGKIGEHVGDWEHVTLRVSNFSGELLRMYFSQHSAGAWVDAPQLEYLDGGNRPS AYSSLHGHALYPRAGLVLQGDARLGVGIRNDCDRGSRLDTGGAGRCEVVSAEYLGGGG GGVAEPTWLLFDREWGPREEYDIGREINRVAKLLPRSTRERLRKLVESVFVGEGPTGP RMKGSWRNDEREAK</aaseq>

Gene Sequence

<dnaseqindica>515..2083#tatggctaaatgcaaataaggcagctttaggcgatgctggcgaggtagcttacctgcaatgacgactaggaacatactttgctatattcatgggctacaagatcctcctctagtcctcggttgctctgaaatgctcgtattggtgtgcccttttctgaacagacactgataaccatgatttccaaagaatatatatgttatcaaatgagaatagaaagcatataccagcataatcttatgccttcatctagctagccagggttgtttggaagacaaatgcgcatctctatccagaacaccacaacttgaatagaccatttctgctctctgttgctatcattatgacttgctaattttttcagctctataaacacttggctaaacgaatttctattcttagttatggcctgccattttgataggcccagttttgtggttttgtcaactctgtaacatctttgtctgactggcgtttgtttgtttgcttgcttgcttgcttctttttcttttcgagatgctgactggcctttctgaattttcagtttcagatggaggatttgcaaagggtagcattgaccttggtggtctagaggtgcgccaagtcaccacgtttgccaaggtctggtccaccggccaagacggcggcggcgccaccttcttcaggccggagcaggtccccgccggcttcagcgccctcggccactacgcgcagcgcaacgaccggccgctcttcggccacgtcctcgtcgcccgcgacgtctccggcggcgggctccttgccccgccgctggactacgcgcccgtctggtccagccaggacgacgccgcccacttctggctccccacgcctcccgatggctacagggcgatcggcgtcgcggtcacggcctcgccggacaagccgccgcgcgacgaggtcgcgtgcgtccgcgccgacttcaccgacgcgtgcgaggcggaggcgacggtgtgggacaaggacgggttcagcgccgtcgccctgaggccggcggttcgcggcgtggacgcccgcggcgtgcacgccggcacgttcgtcctcgccaggagcgacgcgacggcggcgagcgcgtcggcgctggcgtgcctcaagaacaacggcgcggcgtacacgtcctgcatgcccgacctcgcccaggtgaacgcgctcctcgccgcctacgcgccgcagctgttcctccaccccgacgagccctacctgccgtcgtcggtgacgtggttcttccagaacggcgcgctgctgtaccagaagggtagccagaccccgacgccggtcgccgccgacgggtcgaacctcccgcagggcggcggcaacgacggcgggtactggctcgacctgccggtggacaacttccagagggagcgggtcaagaagggcgacctcgccggcgcgaaggtgtacgtgcaggcgaagccgatgctgggcgcgacggcgaccgacctcgccgtgtggttcttctacccgttcaacggcccggcgagggcgaaggtggggcccctcaccatcccgctcggcaagatcggcgagcacgtcggcgactgggagcacgtgaccctccgcgtgagcaacttctccggcgagctcctccgcatgtacttctcgcagcacagcgcgggcgcgtgggtggacgcgccgcagctcgagtacctcgacggcgggaaccggccgtcggcgtactcgtcgctgcacgggcacgcgctgtacccgagggcagggctggtgctgcagggcgacgcgaggctgggcgtcgggatacgcaacgactgcgacagggggagcaggctggacaccggcggcgccgggcggtgcgaggtggtgtcggcggagtacctcggcggcggcggcggcggcgtggccgagccgacgtggctgctgttcgaccgggagtgggggccgagggaggagtacgacatcggccgcgagatcaaccgcgtggcgaagctgctgccgcggtcgacgagggagcggctgcggaagctcgtcgagagcgtcttcgtcggcgagggcccgacggggccgaggatgaagggcagctggagaaacgacgagagggaggccaagtaaaaattttggcggttctcaaatttcagacgacgacacgcggtgatgacgagtgaaaagtttattatatggggtttctcaaattcaaatcagattgttacggagcaattctgaaaaacgatgacagagtgcatggtgaaatatattcttttaagataagatttaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0575900, RefSeq:Os07g0575900