Os07g0588500

From RiceWiki
Revision as of 20:39, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0588500

Description

WD40-like domain containing protein

Version

NM_001188352.1 GI:297725834 GeneID:9267070

Length

4177 bp

Definition

Oryza sativa Japonica Group Os07g0588500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24626040..24630216

Sequence Coding Region

24626040..24626204,24626408..24626538,24626883..24626965,24628105..24628374,24629340..24629415
,24629566..24629646,24629725..24629803,24629911..24630011,24630108..24630216

Expression

GEO Profiles:Os07g0588500

Genome Context

<gbrowseImage1> name=NC_008400:24626040..24630216 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24626040..24630216 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcaccgctcccaccggcgatccgccggtccgcgtcgccgtcgctagcggcggtggcgggatggggttggggaaggagctgcgggagccgccgtcggacggcgtctccagcctccggttctccaagcacagcgatcgcctgctcgtctcctcctgggacaagacggtgcggctctacgacgcggaggccaatgtgcccaggggggtgttcatgcacgcggcgtccgtcctgggttgctgctttcacgacgactcctcggggttcagtgccagcgccgacaacaccgtgcggaggttggccttcagttctggtgggaattatttcttggtacgccatgatgccgcagttagttgtgtcgagtactcctactctactggacaagttatcactggcagctgggataagactataatgtgctgggatccaagaggtgtcaatgggacaagtcatcatacacttgttgggacacataaccaacctgaacgtgtgtactcactttcagtatcaggatataacttggttgtcgcaacagcaggaaggcatgtgaatgtttatgatttgcgcagtatgtctaggcctgagcaacagagggagtctccactaaggtatcaaacacggtgtgttcaatgctatccgaatggaactggatttgctttgggttctgtggaaggacgagttgctatggagttctacgatcaatctgaatctgctccctataagaagtatagtttcaagtgtcatcgagtgcctgaggatggagagaccaaagtctatcctgtcaacgcaatttccttccacccagtacacggcacatttgccactggtggatgtgatagatttgtgaacctttgggatggcgctaacagaaggaaactgtttcaatttcccagatacccatccagcatcgctgctctgtctttcagtagggatggccgtctgcttgctgttgcatccagttacacttacgaggagggagacataccccatccgcctgacgcaatctttatccgtgatgtcaacgaagtacaagtaaagcccaggcccaagatcacattcactgatccgccatcagtagcgtccccatcagtttga</cdnaseq>

Protein Sequence

<aaseq>MSTAPTGDPPVRVAVASGGGGMGLGKELREPPSDGVSSLRFSKH SDRLLVSSWDKTVRLYDAEANVPRGVFMHAASVLGCCFHDDSSGFSASADNTVRRLAF SSGGNYFLVRHDAAVSCVEYSYSTGQVITGSWDKTIMCWDPRGVNGTSHHTLVGTHNQ PERVYSLSVSGYNLVVATAGRHVNVYDLRSMSRPEQQRESPLRYQTRCVQCYPNGTGF ALGSVEGRVAMEFYDQSESAPYKKYSFKCHRVPEDGETKVYPVNAISFHPVHGTFATG GCDRFVNLWDGANRRKLFQFPRYPSSIAALSFSRDGRLLAVASSYTYEEGDIPHPPDA IFIRDVNEVQVKPRPKITFTDPPSVASPSV</aaseq>

Gene Sequence

<dnaseqindica>1..165#369..499#844..926#2066..2335#3301..3376#3527..3607#3686..3764#3872..3972#4069..4177#atgagcaccgctcccaccggcgatccgccggtccgcgtcgccgtcgctagcggcggtggcgggatggggttggggaaggagctgcgggagccgccgtcggacggcgtctccagcctccggttctccaagcacagcgatcgcctgctcgtctcctcctgggacaaggtgagctggagcaaagcaatcacgcgctccgatcggtcggatcggcgcctcgctggtcgcgcgcgccgccgcttgctatttgtttgggaaaaaaagcaaaccctagcgtttgggttggtttgatttgatttgatgatttgatccatggggttttgatggggggagctttgcttttggttgcgggtgtgttcgccgtcccgcagacggtgcggctctacgacgcggaggccaatgtgcccaggggggtgttcatgcacgcggcgtccgtcctgggttgctgctttcacgacgactcctcggggttcagtgccagcgccgacaacaccgtgcggaggtgatgccgatctccttccagtcccgttcgattggttcttcattgagcgattcagttgagataacggttgcactcttagttcactattgttttgtgctgttctgaatggaattggggctttctgtaaactaatcctccatttcgcggacgtacactatgatgttaaaaataggatatgggggtaattttagggtttgatcatagtatgttacgaacttggatcaacgatcagtatcaaaattgtgctaattcatattttgcttttctgttagttcagatcactcatgtaagttgaagcaaaactgatggcttgtgtgttcctggaactttttttttttttgcaggttggccttcagttctggtgggaattatttcttggtacgccatgatgccgcagttagttgtgtcgagtactcctactctactggtacctgttatcgcattttcatctagctgaaaagtgtcgttgattcacccaacttgagtttttactttttagaggagtcccttccgccgacctggcagtttttagagaagtcgctagttgaattcatgattaagtttctagatgaggcaggtctatctcttggaatttgttaatttcatcctaaaaagtactagagcagtgggatcagaacatttactagttgatttcatgttttagtccctcctgagaagggtaatcctatcctagtaagctggttaatctgatttcagaatgaaattccttctttgttaaagacacataaccatcttttgtcaccgtgctacatgagtttttaaatagtttggctatgttctttaccattttaggttgaacagtttatcaaatacccattccatgtaggagtagttgcttataatatccatcttctgtagctattgcttatattctttttatggttgacatgatcattcaatcatgttgtattcaaaggtcatttgaatgtgaattcttcaattgtgtggtcccaattcactgtccagaatggtcgtcagtaactgttgaatgaatattgattaatcctagcaggatagctatctaatgggccatgttgtttactcgttatacctgcatatgtatcgttgatgaatattatagtaaacagtgcatgaatttaggcttaagaaatttgctactgtgtgaagtgatccttgcttactgctacatcacttcagtcaccactttgtgaaatgttttggtaaattctatctacctcttgaatcttccaatataacattcttaatgtatgtacacactacttttgaaattttaagcacgaagctgatgcctgatgccattatactatgatgatttataatgacatcaagttataattaactaattttacttcatgtttatttgcgtcactgcattgaagtagccacttgcatgaagatattaagaaaccaaccatatcaaagcttaaactgtctccttatatatgtggcagtcatttcctgtaaaacctcaattcagttagtgcaataattgccttacaatttgttgcttcttaatgatatcatggagcattttgtgtttacctctaccatgtttcacgccaggacaagttatcactggcagctgggataagactataatgtgctgggatccaagaggtgtcaatgggacaagtcatcatacacttgttgggacacataaccaacctgaacgtgtgtactcactttcagtatcaggatataacttggttgtcgcaacagcaggaaggcatgtgaatgtttatgatttgcgcagtatgtctaggcctgagcaacagagggagtctccactaaggtatcaaacacggtgtgttcaatgctatccgaatggaactggtaaggcactgttacttgattcgagtatttcttcgaacacttaagatctatgtgtgctaaataatgcccatgatatgttcactcttttttatttgtgagcaacataaaactgtgctaggtaaagaatgcttgtctagtttgatattgaagatccttattggtcagttggaaatagactatgaaactcaagtcatactagcttgtaataaatttctacatggttgctgttcccctagctcttgagttccatacttgcatgtatgattgaaatataaggtgcttgaaattcattcgattatattgttattgttttcgtgtgcctgacttcagctgatatacaagttgcttcaaaccatcatttttgtattggtcatttcggctctgttgcttctttacaatatacctgatgtgtttcctaatatactgaggtatgtggaggcatctcatatgtctgttattgacatatgcaattgatgtggaaatcatgaatgcacatccatgtattcttcattaccagagcatttgactgtttcatcttcccacgcctaatttctgattacatttgctgatttgcatggcagtggcaataattataaatttaataacaagagatatttttctagtttttgcaagggttctagccttaaattttatcttgcacgtaaaaaatgttacccaatagtggtcccgactactgaacatgaaggcaccatttttcaggacaaaaggcacaggatgactcatgcaatagatattttatttcgatttcaaatattcattttctaaagtaggtaatgcgaggatatcatctcttgaactaagtgacagctatcttttatttttatgccgtcttttaaatcttcttttagtttcttattaaaattcagcaaagcaccattgagtaaggttccaaagttttacttactagtttaggctttgaattccttgacataactttgatacaggatttgctttgggttctgtggaaggacgagttgctatggagttctacgatcaatctgaatctgctccctataagaagtatgcacctaagctgctgaaggaaaactctttcctgatagctatttacttaagctgatattattagctttgccggagatcatctttttaatctacatattctgctgtgttccatttatatacgtagttacatgcctttattctatccaggtatagtttcaagtgtcatcgagtgcctgaggatggagagaccaaagtctatcctgtcaacgcaatttccttccacccagtgtaatgaaatccccactgatccctcacaaacggttgattattttccgtttctttaatggcctcatctaacatatgcagacacggcacatttgccactggtggatgtgatagatttgtgaacctttgggatggcgctaacagaaggaaactgtttcaagtaatagtcccgcgaactattttttgaagatctctaattctctattctgtatcacaaattcacatcagaatgccttagttcttttttttttcatcttttggttgcagtttcccagatacccatccagcatcgctgctctgtctttcagtagggatggccgtctgcttgctgttgcatccagttacacttacgaggagggagacataccgtaagaccagaatttgtctaacccaactattctctgtcagtattaagtattaacagttgaaactggttctcaccagcattattttgtacaatgcagccatccgcctgacgcaatctttatccgtgatgtcaacgaagtacaagtaaagcccaggcccaagatcacattcactgatccgccatcagtagcgtccccatcagtttga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0588500, RefSeq:Os07g0588500