BGIOSGA016586

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Revision as of 04:31, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016586| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016586, complete gene.| tag = OsI_162...")
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Gene Name

BGIOSGA016586

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016586, complete gene.

LocusTag

OsI_16264

Ensembl Transcript ID

BGIOSGA016586-TA

Ensembl Protein ID

BGIOSGA016586-PA

Length

5854

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21932166..21938019

Sequence Coding Region

21932166..21932409,21934726..21934823,21935189..21935226,21935404..21936631,21937636..21938019

Genome Context

<gbrowseImage1> name=IndicaChromosome04:21932166..21938019 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:21932166..21938019 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCTAGTGGCCAGGTCTGGTGCCTCCTTCCTCTCCGCGTCGCCTTGTCACCGCCGCTGCCGCCGTGGCCGCCGGCGACGATGGTTATGCCACCTCTTCTCGCCGCCGCCGCCGCCATGGCTGCTAGTGGCCAGGTCCGGCGCCTCCTTTCTCTCCGTGCCGCCTTGCCGTCACCATGGCCGCTGGCGACGATGGCTCCTTCCTCTTCTCGCCACCGCCACCATGGCTGCCGGTGCCCAGGCTTCCAGTACGCTTTTGTCAGAGAAAAGGCTGCAGGAGATCACCTGTCACTTGGGTACATGCAGCATGGAGTGAGAGCTTTCACTCTCATCCTACTTGATAATAACAATAAAAAGAAGAAAGGGGATTTGTCCAATAACCTCGATCTCAGCTCATCACCTCTTCTCATGGACTCTCGAGGTCAAGCCTACTACCACAGGGCGGCGGCAGCGGCGGCGGCGGTGGCCGCCGGTGATGCTACTGACGGTGAGGAGCCAGCTGCTGCTGAGCTCGCTCCGAAGGCTGTGAGATCGAAGAAGAAGCTGGCGGTGGAGGCGCAAGGCGGCGCCGCCGTGCGCGATGATCTGACGTGCCCAGAGTGTGGCAAGGTGTTCATGTCGGACAAGGCGATGTACGGACACCTGCGATCTCACCCACTGAGGAAGCACAAGGGGGCGGCGCGCCTGGCGGCGGTGGCGGCGGCGGCGGCCGACGATGCTTCCGTGGCCGCTGGGGTCAAGCCGAGGCCGTGGAAGGTGCCACGGACGAAGGAGGAGGCTGAGCTCGGCGACGACCGCCACCCGGGGAGGTCGCCGGTGACGGGGAAGCGCGGGCGGCCGGCGTCCTCGGCCAGTAGCAGTGGCAGCGCGCCCGCGCCCGCGCCGCCCGCGTCGTCCAGGCTGCAGCTGGTGATCACGGAGGAGGAGGAGGCGGCCATGACTCTCCTGGACATTGCCTCGGGGTGCTCGCTTGATCACCAGCCTACGCAACCGGCGCATGTCGCCGACGCCGCCCTCCTGGCGCCGGCTTCGGACCAGATGCCAAGCGTCGACGTCGAGCAAGGCGTCCTCGCCGTCGCGGAGCACAGGACGTGGGAAGCTGAGAAGCCTGCGCTGGTCGAACATGTCTTTGGGATCGTCAAGGAGCATGTCGCCGCGGTCGCCGCCGACGCCGAGCCGCAGTCGCCGGAGGCGAAGACGCCAGTGAAGCTGGGGCCTGTGACCGATCAGGCTGTCCCTGTTCTCGGCGACAAGAACGACGACGGCCACGCCGACATGCCCGTGTCCCCCGGAGGCGGCACCACCAAGAAGCCTTTGAAGCGAAGACTCCAGGACGTCGAGACGAAGCATCCCACAGCACCGCCACCGCCGCCGGTGAAGCGCATCCCGTCGCCGGCGTCGAAAAGGAAGTACGAGTGTTCGGAGTGCCACAAGACGTTCTCCACTCACCAAGCCCTAGGCGGTCACGTAGCGGCCCACAAGAGGCAGAAGAAGAGCTGCGCCGAGCAGCAGCAAGAGGCGGTGGCGGCGGCGGCGCAAGTCGCGCGGCACAACTTCCTGGCTCACCAGCGCCCGGCCGGCGTCGTCGTCGCCGTCGACGCCACCGCTCTCGGCGGCCACATGCGGAAGCATTTTCTCGAGGCCAAGGAGCAGGAGCAGCTGCTCGCCATCGCCATCGCCAACGCCAACGCCAACGCCAACGCCAACGCCGCGCCGGAGCCGCCGCCGATGATGGCCAACGCCGCGCCAGTGCCGCCGCCGTCGATGGCCAACGGCGCCGGGCCCGTGCCGCCGCCGATCGCCGTCGCCCCTCCTCCCGCGCCACCGATCGCCGGAGCCGCTCCTCCTCCGCCCATGGCCAACGGCGCCGCGGCGGCTGCGCCACCGGGGGGCAACCCGGCGCCACCAGCTGGGCCGCAGCCGGGCGTGAACATGTTTGACCTCAACGAGTTGCCCAACGAGGATGCAGGGGAGAACCAGCAACCCTAG</cdnaseq>

Protein Sequence

<aaseq>MAASGQVWCLLPLRVALSPPLPPWPPATMVMPPLLAAAAAMAASGQVRRLLSLRAALPSPWPLATMAPSSSRHRHHGCRCPGFQYAFVREKAAGDHLSLGYMQHGVRAFTLILLDNNNKKKKGDLSNNLDLSSSPLLMDSRGQAYYHRAAAAAAAVAAGDATDGEEPAAAELAPKAVRSKKKLAVEAQGGAAVRDDLTCPECGKVFMSDKAMYGHLRSHPLRKHKGAARLAAVAAAAADDASVAAGVKPRPWKVPRTKEEAELGDDRHPGRSPVTGKRGRPASSASSSGSAPAPAPPASSRLQLVITEEEEAAMTLLDIASGCSLDHQPTQPAHVADAALLAPASDQMPSVDVEQGVLAVAEHRTWEAEKPALVEHVFGIVKEHVAAVAADAEPQSPEAKTPVKLGPVTDQAVPVLGDKNDDGHADMPVSPGGGTTKKPLKRRLQDVETKHPTAPPPPPVKRIPSPASKRKYECSECHKTFSTHQALGGHVAAHKRQKKSCAEQQQEAVAAAAQVARHNFLAHQRPAGVVVAVDATALGGHMRKHFLEAKEQEQLLAIAIANANANANANAAPEPPPMMANAAPVPPPSMANGAGPVPPPIAVAPPPAPPIAGAAPPPPMANGAAAAAPPGGNPAPPAGPQPGVNMFDLNELPNEDAGENQQP</aaseq>

Gene Sequence

<dnaseqindica>1..244#2561..2658#3024..3061#3239..4466#5471..5854#ATGGCTGCTAGTGGCCAGGTCTGGTGCCTCCTTCCTCTCCGCGTCGCCTTGTCACCGCCGCTGCCGCCGTGGCCGCCGGCGACGATGGTTATGCCACCTCTTCTCGCCGCCGCCGCCGCCATGGCTGCTAGTGGCCAGGTCCGGCGCCTCCTTTCTCTCCGTGCCGCCTTGCCGTCACCATGGCCGCTGGCGACGATGGCTCCTTCCTCTTCTCGCCACCGCCACCATGGCTGCCGGTGCCCAGGTCCGACGCCTCCTTCCTTTCCACGTCGCCCTGGTGCCGTTGTGCTGTGGTCGCCGGCGACGACGCCATCTATTCTCGTCGCCGCTGCTACCAGCGTTTACCGTGAGAAGATAAATGAGAGGATAAGGATTAGGAAGAGACGTGGGTTGAAAAAAATTGACAGTGGGTCCCACCATGAGCGCTGTCCGACGTTTCGTCTCCTGTCGAACGCCCGGTTACAAGCATTTTCCAAACAAAAGAGGCTACTAGTACTAACGGATTGCTCCTCTCATCTACCCCCAACGCAAGCAGCAATTTTTTTTAACGATAGCCAAAGCTTGCCTACTCATTAAATATAATGGGTAAATTTACAAGTAAGGAAAAAAATAATATTACAGCACAACGGTCTGGATCTACGGTAACATCTTTGCCAGGCGTTTGGCTCCCGCCATAATCCAAAATTCGCCCTCTTCCTTTATCTTCGCGATTAGGGCTAACGTGGGTTAGCTCCTTGTTTTGGAAGACTCGCTGGTTTCGCTCCTTCCAAGCTTCTCAAAGAGATTAGAAAGATTAGGGATCGACTCCTGTGCTTGGGTGCATCTTGCTGTCTTGACATGTTGCAAGCGATTCCCACCAGTGGTGGACTATGGTCGCTCGCGCGTCCAGTTTGTCGGTCCTATGGGTTCATAAGCTAATACTCAGGTAGCAATGGTATCCCAGATTTTCCTTGTATATCTGAAATCCACTTCTGATCTGTGCAGCAGTTGAGGGAGAGGGAGAGCACGCGCGAGCGTAGTCCGGAGTTTGCACGGCGGCCCATCCGCGAATATCTCAGTACCGACCTGTACTACCTGTACTCACCCGGTCACCCCCCCCCCCCCCCCCCCCCCACTCCCACGGCGTGGTGGCAGCGTACACCCCCTCTTCCTCTCCCCTTCACTACAAGTAGTCCCCACTGAGATCGAGAGCGTAGGTAGCCTCGCCTTCTCTCTCTCTCTCTCTCTCCGGGTTTCTTTTTCCTTTCTTGTCGCTGCTGATATCTTTGAGGCGGTTACACCTCCGAGCTGGACACCCACCCCCCAGCTCTGCTCAGCCGCCCGCGCGCCTCCCCGACGACGACCGGCCGCCGTGTGTGGCTCCTCGTCCTGTGAGGTAGGTGAGATTGGTACGCGCGTGTCGTCTCCCCTCCCCTCCACCTCCGCTAGCTTCTTCTTCGTCTCTCTCCCGGCCGTTATCTCTGCTCGTGCGTGCTCGCGTGGGGTTCTTGGTATCTCTCCGGTAGGGTTTATGGGGGGAGGTGGGTTGGTGCGGTTTCGGAGCTGGGAAATCCGCTGCGTGCTGCTCCTGCTTGCTTGCTTGCAACCGCGGGGTTTGGGGAGGGATTGGAGAGGGAGAGCTCGATCGTGCGGCGCCGTGTTGGATAGATCGTCTCTTCTTTTCAGCTTCCTGTAGTGTAGGTCCTGTATATGTTCTTGCTGTGATATTCTGCTTGACCACCCGCTGTTTCTTTCTGGTTCTTCTTGGGTTTCTTGCTGCAGAGAGTTAGTTAGTATACGCTCGATCTCGTTGATATCGATCTGAGCTGCATTTCTTTTTCCTTCTTCTCCCTGTTGATTCTGCTGCTGCTGGAGCTGGGTCTTTCTTGGGATCTGTGGGAGCGGATTGGATTGGTTCCTCTCCCTGGGCTGGTCTTACTTTTATCGTTTCCGATCTTGCCGGCCGTTTCTCCTGCAGGCACACCGACGTGACGTGATGAATCCTCCTCTTCTCCTCTCCTCTCCACCGTCCGGGTTTGAGTGCAAGATTTAATTCAGTGCCTTTTCCTTGGTCAGCTTTTCTTGATCTTGAATCTCTCTCTCTCTCTCCTGTTTAATGTGGTTGCAGTTGTTCACTTCTTGCCGTTTTATTCTTGCCACTGCTTCAGTGTGGATCGGTTCTTCTGGGGTGGGGGGTGTTGCTGGATTTTTCGTTATTTGATTCCCTTCTTAACCTGAGGTGGATTTGCAGCTGGTTACCTTTGGGTTACCATCTAATACTGCCAGTTTCCATTTATTCCTTTCCACTAGAGGTCCATGCAAAGAAATCGATACAGGTCCAGGCCTTTCCATCCTCTTTTGCCAAAAACAATCCCGATCTAGTTTTAATTAGTGTATACATTCCATTTAATTCGCCTGGTCGATCAGTGGTCACTAAGGGGGGGGGGGGGGGGGGGTGTCATGCACGCCTTGGCTCAGCTCCTGTAGCTTAGCTAAGCTAGAAATCGTTAGCTTTTCATTCAGTGTGCTTGACTGCTACTACTAGTAGTAGTGCACTTCTCAGGTTGGTACTGATCTCTAGGCTTCCAGTACGCTTTTGTCAGAGAAAAGGCTGCAGGAGATCACCTGTCACTTGGGTACATGCAGCATGGAGTGAGAGCTTTCACTCTCATCCTACTTGTGTGCTCTCTCTCCATGCATGTTCTCGTTACTTTACTGGAAGTAGATGATTTTTTTCGCATTCAGCAGCTTTGCTGCTTTTTACTACTACTGGAATACACATATGTGTGACTTATTACATTACACCCTGAGAATGTATTAAAAACATCCATGGTTCACTTCAGCTGGTTCAGCTACTCAGTTTGAGATGTAATTGGATCTCTTTTGTGGTGTGCTTTTATTTGCTGATGAAGTTGCCATTATTTCATGCTTTTTGAAGTTTTTCCTCTTTGTCTATAAATTGGTGCTTCTATCTAAGAATATCTTGATAGTTACTAAATAATGTTCATATCTGATTGGTCACCTTCCTTGTTTTTTTTTTGCAGGATAATAACAATAAAAAGAAGAAAGGGGATTTGTCCAAGTGAGGCTTTTAAGATTCTCTCTGGTGTCTCGTGTTCGTTTCAGTTTCTTGGCTGTGTGGCATAATTAAAGGAGCATATTGAGGTTTAACTCGCTTGGCTAAGCTGCCCGGAAACGGATACAACCACCATCAGAGAAGCATACACACCACCATTAATCACCTCTCTGATCAATTCAGTAACCTCGATCTCAGCTCATCACCTCTTCTCATGGACTCTCGAGGTCAAGCCTACTACCACAGGGCGGCGGCAGCGGCGGCGGCGGTGGCCGCCGGTGATGCTACTGACGGTGAGGAGCCAGCTGCTGCTGAGCTCGCTCCGAAGGCTGTGAGATCGAAGAAGAAGCTGGCGGTGGAGGCGCAAGGCGGCGCCGCCGTGCGCGATGATCTGACGTGCCCAGAGTGTGGCAAGGTGTTCATGTCGGACAAGGCGATGTACGGACACCTGCGATCTCACCCACTGAGGAAGCACAAGGGGGCGGCGCGCCTGGCGGCGGTGGCGGCGGCGGCGGCCGACGATGCTTCCGTGGCCGCTGGGGTCAAGCCGAGGCCGTGGAAGGTGCCACGGACGAAGGAGGAGGCTGAGCTCGGCGACGACCGCCACCCGGGGAGGTCGCCGGTGACGGGGAAGCGCGGGCGGCCGGCGTCCTCGGCCAGTAGCAGTGGCAGCGCGCCCGCGCCCGCGCCGCCCGCGTCGTCCAGGCTGCAGCTGGTGATCACGGAGGAGGAGGAGGCGGCCATGACTCTCCTGGACATTGCCTCGGGGTGCTCGCTTGATCACCAGCCTACGCAACCGGCGCATGTCGCCGACGCCGCCCTCCTGGCGCCGGCTTCGGACCAGATGCCAAGCGTCGACGTCGAGCAAGGCGTCCTCGCCGTCGCGGAGCACAGGACGTGGGAAGCTGAGAAGCCTGCGCTGGTCGAACATGTCTTTGGGATCGTCAAGGAGCATGTCGCCGCGGTCGCCGCCGACGCCGAGCCGCAGTCGCCGGAGGCGAAGACGCCAGTGAAGCTGGGGCCTGTGACCGATCAGGCTGTCCCTGTTCTCGGCGACAAGAACGACGACGGCCACGCCGACATGCCCGTGTCCCCCGGAGGCGGCACCACCAAGAAGCCTTTGAAGCGAAGACTCCAGGACGTCGAGACGAAGCATCCCACAGCACCGCCACCGCCGCCGGTGAAGCGCATCCCGTCGCCGGCGTCGAAAAGGAAGTACGAGTGTTCGGAGTGCCACAAGACGTTCTCCACTCACCAAGCCCTAGGCGGTCACGTAGCGGCCCACAAGAGGCAGAAGAAGAGCTGCGCCGAGCAGCAGCAAGAGGCGGTGGCGGCGGCGGCGCAAGTCGCGCGGCACAACTTCCTGGCTCACCAGCGCCCGGCCGGCGTCGTCGTCGCCGTCGACGCCACCGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGATCATTAGCGTTTTCCTAATGATGGTCACTAAATGCCTAGATGGTTTTGTTTTTTGTTAAGACGATGACCTACCTAGCTAATTAAGCTAGTGCCCCATAGAGCGGCGCCGTGAGGTAGCTTGATCGATGCGATCGTTCATGCGTGCATGGTGGCCATGTAGCAGCAGCTAGCAAACTTTGTGGCGCGGCCGTCGTCGCAGCACCAACTTTTGACCATGGCCGGCGGACACTACATTACAGTAGTGGTGTAGTACTCATCGATCATGCATCGCGCGCGCGGCATCATCGATCGTGTGGTGGTCGAACGAACCCCCACCCGCCGCGCGCGCAGTCGCGCGCGTATACCAACCTCTCCTCTCGAGCCGCGCGCGCGTGCGACGCGTACGTAGGTCTCGCCGCGCGGCTCGGCTTTACCCCCTTCCCCGTTGGGCTCGTGGTGGTCTGGCCACTGCGCTGCCGCCGCTGCGTAGGCGATCCGAGATCGAGGAGACTCGCGTGCACGCGCGGCTACGTCTATAGCAGGAGAGCTAGCTAGCAAGCACGGGCCGCGCGCCCGCGCGGCGTTGATGCGTGCTACTGTACGTTGCAGCGATGCGTCGCTGTGCGCACGGTACGCCGTACGCTTCGTTCTCTCTCTCTCTCTCTCTCTCTCTCCGGCAGGGGAGAGCACTGTTTTAATTTTCTGTAGGAGGCTAGCTAGGCTTGGCGGTAAGCGCGCATGCACGTACGATGTACTGTAATACGTCTGTACGGAGTACTACTGTAAGTAGTGCGGAGTGCAGAGCCACTGCCTCGATCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCACCGCCGCCGCCCGCACCCGCGCCTGCGCTCGCGCCCGCGCCGCAGCAACACCAGTGCTTACGGTGCCCCATGGTCTTCCCCACCGGGCAGGCTCTCGGCGGCCACATGCGGAAGCATTTTCTCGAGGCCAAGGAGCAGGAGCAGCTGCTCGCCATCGCCATCGCCAACGCCAACGCCAACGCCAACGCCAACGCCGCGCCGGAGCCGCCGCCGATGATGGCCAACGCCGCGCCAGTGCCGCCGCCGTCGATGGCCAACGGCGCCGGGCCCGTGCCGCCGCCGATCGCCGTCGCCCCTCCTCCCGCGCCACCGATCGCCGGAGCCGCTCCTCCTCCGCCCATGGCCAACGGCGCCGCGGCGGCTGCGCCACCGGGGGGCAACCCGGCGCCACCAGCTGGGCCGCAGCCGGGCGTGAACATGTTTGACCTCAACGAGTTGCCCAACGAGGATGCAGGGGAGAACCAGCAACCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016586