BGIOSGA016587

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Revision as of 04:31, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016587| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016587, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA016587

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016587, complete gene.

LocusTag

OSJNBB0022F23.4

Ensembl Transcript ID

BGIOSGA016587-TA

Ensembl Protein ID

BGIOSGA016587-PA

Length

3849

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22014121..22017969

Sequence Coding Region

22014121..22014220,22014804..22015097,22015241..22015356,22015449..22015947,22016049..22016087
,22016167..22016454,22016552..22016691,22016959..22017442,22017707..22017969

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22014121..22017969 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22014121..22017969 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGGGCAGCCATGTCTGCTCCCTGGTTTCCTCCCTCGTTTTCCTGTGGCTGGGGGTTGCTGCTGCGCAGAAGGCCTCTTCTTGGAAGACGCTGAGCGGCAATGCTCCGGCAATCATAGCCAAGGGAGGATTTTCAGGCATATTCCCCGATTCAAGCGAATTTGCATACCAGTTTGCGCTCATTGCTAGTTCGCCAGATACAATCCTATACTGTGATGTTCGGTTGACCAAGGATGGTCTTGGTATCTGCCTGCCGGACATAAAGATGGACAACTGTACCAATATTCCAGATTTCTATCAACAGGGTAGGAAGAGCTACCTTGTCAATGGCGTGTCGACGGCGGGATGGTTCTCCGTTGATTACAATGGCACCGAGCTTGGCCAAGTGTCTTTGAAGCAATCAATCTTTTCTCGCTCGCCGAGGTTTGATCCAAGCTTCTTTCCAATTCTTGCTGTCGAAGACATAGCATCCAAATTTAAGCCTCCTGGAATGTGGCTCAATGTCCAGCATGACAGTTTCTACAGTCAGTTCAATTTAAGCATGTCAAACTACATCCTTTCTGTGTCAAAACGTGTTATTGTTGACTATATCTCATCACCTGAAGTGAGCTTCCTTACTAAAGTATCTGGAAAGCTTAGCAACAACACGAGGCTTGTGTTCCGTTTTCTTGATGAGAGCACAATCGAACCATCTACCAAACAGACATATGGATCCATGTTGAAAAATTTTACATTTGTCAAGACATTCGCATCTGGTATAATTGTCCCAAAAAAATATATCTGGCCTGTTTCACCAGATAATTATCTGGAACCACACACTTCAGTCGTCGATGATGCTCATAAAGCAGGGTTGGAAATTTATGCTGCCAACTTTGCCAATGACTTTATGTTCAGTTACAACCATAGCTATGATCCATTAGCAGAATATCTCTCGTTCATTGACAATGGTGCTTTCTCTGTTGATGGAGTATTGACTGATTTCCCTGTTACACCTTCAGAAGCCATAGGCTGCTTTACTAATCTGAAGAAAAGAAAAACAGATCATGGAAAGCCTCTAATTATTTCCCACAATGGTGCTAGTGGGGATTACCCAGCCTGCACTGATCTAGCTTATCAAAAAGCAGTTGATGATGGTGCCGATGTCATTGATTGCCCTGTCCAATTGACCAAAGATGGCATACCAATATGCATGAGTTCCATTAACTTGATGGATGATACTACAGTTGCAAAATCACAGTTCGCCTCTCAGACAGCAGTAATCAAAGATATTGAGAGTGTGCTAGGAGTCTTTACCTTCAACCTTACTTGGGATGACATCGTAAAGAATCTGAGACCCAAAATCTCTACCCCGTTTAGCTCCTTCAAACTGGACAGAAATCCAAGATATAGGAATGCGGGGAATTTCATGAGATTATCAGACTTTCTGGACTTCACAAAGGATAAGGATTTATCAGGAATTATGATCAGCGTGGAGCATGCTGCTTTTGTGGCGGAGGAACTTGGGTTTGACATGGTAGATTCAGTTATCAAGACCCTCGACGCTGCTGGTTACAGCAACCAAACTGCCCAGAAAGTTATGATTCAGTCAAGCAACAGCTCGGTTTTGGTGAAGTTCAAGCAGCAAACGAAGTACGACCTTGTGTACATGATCAACGAGGAGGTCAAGGACGCCGCGCCTTCTTCCCTCGCTGCCATCAAGAAGTTTGCCGATGCTGTTTCCGTCGAAGGCAACTCTATATTCCCCGAGAACCGCCATTTCACTACCTACCAGACCAACCTCGTCGAGTCCCTGCAGAATGCCGGTCTCCCGGTCTATGTTTACACTCTCATGAACGAGTTCGCTTCTCAGCCATACGACTTCTTCTCGGACGCGACCGCGCAGATCAATGCGTATGTTCAGGGTGCTGGAGTGAATGGCGTGATCACAGATTTCCCGGCAACAGCACGGAGATACAAATTGAACACCTGTATGCACATGGGGAACAACACGCCGAGCTTCATGGCCCCGGCTCGCCCGGGTGACCTGCTGCAGATCATCAGTAAGCCGGCGCAGCCGCCGGCGATGTCGCCGATGCCCCTCCTGACGGGCTCGGACGTGGCGGAGCCGCCGCTGCCGCCTGCAAGAACAGCTCAGGCGCCGTCGCTCGCGAGCAGGATGCAGGCTCATGCCGCGATCGTCGTCACATTGGCGATGCTTCTCGCTTGCCATCCCCTGGTATGA</cdnaseq>

Protein Sequence

<aaseq>MRGSHVCSLVSSLVFLWLGVAAAQKASSWKTLSGNAPAIIAKGGFSGIFPDSSEFAYQFALIASSPDTILYCDVRLTKDGLGICLPDIKMDNCTNIPDFYQQGRKSYLVNGVSTAGWFSVDYNGTELGQVSLKQSIFSRSPRFDPSFFPILAVEDIASKFKPPGMWLNVQHDSFYSQFNLSMSNYILSVSKRVIVDYISSPEVSFLTKVSGKLSNNTRLVFRFLDESTIEPSTKQTYGSMLKNFTFVKTFASGIIVPKKYIWPVSPDNYLEPHTSVVDDAHKAGLEIYAANFANDFMFSYNHSYDPLAEYLSFIDNGAFSVDGVLTDFPVTPSEAIGCFTNLKKRKTDHGKPLIISHNGASGDYPACTDLAYQKAVDDGADVIDCPVQLTKDGIPICMSSINLMDDTTVAKSQFASQTAVIKDIESVLGVFTFNLTWDDIVKNLRPKISTPFSSFKLDRNPRYRNAGNFMRLSDFLDFTKDKDLSGIMISVEHAAFVAEELGFDMVDSVIKTLDAAGYSNQTAQKVMIQSSNSSVLVKFKQQTKYDLVYMINEEVKDAAPSSLAAIKKFADAVSVEGNSIFPENRHFTTYQTNLVESLQNAGLPVYVYTLMNEFASQPYDFFSDATAQINAYVQGAGVNGVITDFPATARRYKLNTCMHMGNNTPSFMAPARPGDLLQIISKPAQPPAMSPMPLLTGSDVAEPPLPPARTAQAPSLASRMQAHAAIVVTLAMLLACHPLV</aaseq>

Gene Sequence

<dnaseqindica>1..100#684..977#1121..1236#1329..1827#1929..1967#2047..2334#2432..2571#2839..3322#3587..3849#ATGAGGGGCAGCCATGTCTGCTCCCTGGTTTCCTCCCTCGTTTTCCTGTGGCTGGGGGTTGCTGCTGCGCAGAAGGCCTCTTCTTGGAAGACGCTGAGCGGTACTACATTCCTTCGGGTTCTGGTTTACTTTCTTTCTGGTTCATTTCTGTGGTGTGCCGCGATGTGAATGAGCCGAACTGTAGCACTTCCGTTGGTCGATAGAGCAACATTTTCCTTGCATTTTTGGGCATCAAGTTTGGGGATGATCTGTAGTACGTGTTCTATGTTCTGCTTAAAATTTTCTTCTTCTTCTTCTTTTTCATCATTGGCACCACATTGATTTCGTTCTTGCACGGTAACATAGTTCATTTCACCCCCGTTTAGCATTGTTCCAACAGCTTATTTAGCTACGTACATTATTTTCTTAGATGTTGGGTTGAAAAGATTGGGACCAAACGACCAAAAACTGGCCCTTTAATTATTTCTTCTCCTGGGTAGCATAGGCTTTCTTTACCTTATCAGGGTAGTTTTGTGGAGATTAATCATAGTACATGCAATTTCTGTGAAAAAGCCTCTCTTTTTTTTTATTTTGGGAAGGATAAAAAAATGGCACCGCAGCATTCAGAAGTTAGGACCTAACCATTGCAGTTAGGAGTTATGCTATGCACGTCTACAAGGCTAACGGTCAGCTCACCATTTCAGGCAATGCTCCGGCAATCATAGCCAAGGGAGGATTTTCAGGCATATTCCCCGATTCAAGCGAATTTGCATACCAGTTTGCGCTCATTGCTAGTTCGCCAGATACAATCCTATACTGTGATGTTCGGTTGACCAAGGATGGTCTTGGTATCTGCCTGCCGGACATAAAGATGGACAACTGTACCAATATTCCAGATTTCTATCAACAGGGTAGGAAGAGCTACCTTGTCAATGGCGTGTCGACGGCGGGATGGTTCTCCGTTGATTACAATGGCACCGAGCTTGGCCAAGTGTCTTGTAAGTGCTATCATACCGATCTAAGCTCCCAGATATTGGAGCTTTGGTGCATTTACTAATGCCAATATTGGATTAGGAAAGCGGAATACCTATTGTATTAGTTTACATGTCTAACTCATCGTTGTTGTATGTATTTTGTGCAGTGAAGCAATCAATCTTTTCTCGCTCGCCGAGGTTTGATCCAAGCTTCTTTCCAATTCTTGCTGTCGAAGACATAGCATCCAAATTTAAGCCTCCTGGAATGTGGCTCAATGTCCAGGTACTGTTACAAATCTTGACGTGGCACAGTAGGTTATGTTGCATGTATTTCTGTTGTCACTTGTCACTAAAAGCAATTTTTGCCATTTGCAGCATGACAGTTTCTACAGTCAGTTCAATTTAAGCATGTCAAACTACATCCTTTCTGTGTCAAAACGTGTTATTGTTGACTATATCTCATCACCTGAAGTGAGCTTCCTTACTAAAGTATCTGGAAAGCTTAGCAACAACACGAGGCTTGTGTTCCGTTTTCTTGATGAGAGCACAATCGAACCATCTACCAAACAGACATATGGATCCATGTTGAAAAATTTTACATTTGTCAAGACATTCGCATCTGGTATAATTGTCCCAAAAAAATATATCTGGCCTGTTTCACCAGATAATTATCTGGAACCACACACTTCAGTCGTCGATGATGCTCATAAAGCAGGGTTGGAAATTTATGCTGCCAACTTTGCCAATGACTTTATGTTCAGTTACAACCATAGCTATGATCCATTAGCAGAATATCTCTCGTTCATTGACAATGGTGCTTTCTCTGTTGATGGAGTATTGACTGATTTCCCTGTTACACCTTCAGAAGCCATAGGCAAGTCCTTTTTGTCTATATCATTGCGGAAAGGCATTTTTGTTCTTAAAATTTTGAAACACTCCTGATGATGTTGTTTCGTCCTTTATTTTGCTGTGCAGGCTGCTTTACTAATCTGAAGAAAAGAAAAACAGATCATGGTATGTTCAATTTCACTCTCTTGTCTATGTTCCACGTTTTTTTTTGTTACTGACCACCATTTTCACATCTGGTTTGCAGGAAAGCCTCTAATTATTTCCCACAATGGTGCTAGTGGGGATTACCCAGCCTGCACTGATCTAGCTTATCAAAAAGCAGTTGATGATGGTGCCGATGTCATTGATTGCCCTGTCCAATTGACCAAAGATGGCATACCAATATGCATGAGTTCCATTAACTTGATGGATGATACTACAGTTGCAAAATCACAGTTCGCCTCTCAGACAGCAGTAATCAAAGATATTGAGAGTGTGCTAGGAGTCTTTACCTTCAACCTTACTTGGGATGACATCGTAAAGAATCTGAGACGTAAGTTAAATTGAAACATTTCTACCTATTTATGTGTTATGAATAAAATGGATGTGTTATCCTAGGGAAATAAGACTATTCATTTTCATTCTTACAGCCAAAATCTCTACCCCGTTTAGCTCCTTCAAACTGGACAGAAATCCAAGATATAGGAATGCGGGGAATTTCATGAGATTATCAGACTTTCTGGACTTCACAAAGGATAAGGATTTATCAGGAATTATGATCAGCGTGGAGGTGAAAATTTTAATGCTTGTTTCAGTTTATGAACATACCTACATTTATTTGTTTATTTCATTACTTTATCGCAATGTTATTGCTGTCCTTTTACTTCTGTTGAATCACTAGTCTGTTCTGTCAATCATTGTTTTCCCCCCTTCACATTTCAGTGTTTAAGCATACCAACAAAAACCCGTGAACCACAAAATGTGTTTTTTTCTTTTTTTTGCTGAATTTCAGAAATAGTTACTACTCTCAATTAACTACCTACCCATATGTTTGCAGCATGCTGCTTTTGTGGCGGAGGAACTTGGGTTTGACATGGTAGATTCAGTTATCAAGACCCTCGACGCTGCTGGTTACAGCAACCAAACTGCCCAGAAAGTTATGATTCAGTCAAGCAACAGCTCGGTTTTGGTGAAGTTCAAGCAGCAAACGAAGTACGACCTTGTGTACATGATCAACGAGGAGGTCAAGGACGCCGCGCCTTCTTCCCTCGCTGCCATCAAGAAGTTTGCCGATGCTGTTTCCGTCGAAGGCAACTCTATATTCCCCGAGAACCGCCATTTCACTACCTACCAGACCAACCTCGTCGAGTCCCTGCAGAATGCCGGTCTCCCGGTCTATGTTTACACTCTCATGAACGAGTTCGCTTCTCAGCCATACGACTTCTTCTCGGACGCGACCGCGCAGATCAATGCGTATGTTCAGGGTGCTGGAGTGAATGGCGTGATCACAGATTTCCCGGCAACAGCACGGAGATACAAATGTATGTCTGGTTAACTAAGCTTGTCTGCATCCTAGATACTACCTCCGTTTCAGGTTATAAGACTTTCTAGCATTGCCTATATTTATATAGATTTTAATGAATCTAGGCATACATATATGTTTAAATTCATTAACATATATATGAATGTGTGCAATACTAGAAAGTTTTATAATATGAAACGGAGGAAGTAGCTCCCAATATCCCTTCACTTCTAAAATTTCTGTTCTTCTGAGTGCTGACACCATCCGTTCCGTGTTTTTGCAGTGAACACCTGTATGCACATGGGGAACAACACGCCGAGCTTCATGGCCCCGGCTCGCCCGGGTGACCTGCTGCAGATCATCAGTAAGCCGGCGCAGCCGCCGGCGATGTCGCCGATGCCCCTCCTGACGGGCTCGGACGTGGCGGAGCCGCCGCTGCCGCCTGCAAGAACAGCTCAGGCGCCGTCGCTCGCGAGCAGGATGCAGGCTCATGCCGCGATCGTCGTCACATTGGCGATGCTTCTCGCTTGCCATCCCCTGGTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016587

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016587&oldid=65481"