BGIOSGA016601

From RiceWiki
Revision as of 04:31, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016601| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016601, complete gene.| tag = OS04G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016601

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016601, complete gene.

LocusTag

OS04G0476400

Ensembl Transcript ID

BGIOSGA016601-TA

Ensembl Protein ID

BGIOSGA016601-PA

Length

3830

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22219399..22223228

Sequence Coding Region

22219399..22219453,22219825..22219881,22220046..22220147,22220501..22220577,22220686..22220809
,22221069..22221133,22222166..22222235,22222734..22222809,22222936..22223026
,22223106..22223228

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22219399..22223228 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22219399..22223228 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGTGGTGCGGCGACCTGGCTGCGCCGCCCCGCCTCCTCGTCGCCCCTCGTCCTTCTGATGGCAATTGTCAAGGGAATGTTTTGTCTCTCCGCCACCCGAGATCAGATGAAGAAACAGGGTATCTGTTCATCGACGGTCAACTTCACGAGTTCAATTGGTTTAAGGAGCGATTTGGATCTTGGTTCTTGGGTGATTATGTTTGTGAAGATGGCAGCCTCTACTACTGCACAGTTGTTGATCCCATTTTTATTCTTCTACCAATTTTGAAAGCTGCACGTATGTCGAATGGTAAAGATCCAGGAAAATTTAGGCAACTGGATGAAATATTGTATGTTGAAGGATATCCTGGATATCAACACCTCATGGGTATAGCAGGAAACCATATTGATCTGGTCTGTGAAGTTAAAGAAGTTGCTAATGTGAAGTTCTTTAGGCTGAACGATTCCAAGGTCTTATCTTGGTTGTGCTGTAAGGTTCACAATCTAAAAGAGGTTTTCCCCAAGCTAGGCAAAAATTATGCTGCCCAAGGAGAAAAAGAATTATTGAAGGATGCCGTCCAAATAATTCGCGAATACCTGAACGACGAACCATGGTTAACGTTACTCTGCAAGAAGTTGCAGTTGGATATCAAGGAGATCATTGAAGCGAACAAAACTAGCGAAGCTTCCTTCTGTGCAGAGAATTCTCCTGTACCTTTCCACCCTGCTGAGGAGAAGCTTGGAAGTAGTAGCACTAGGTCAAGCAAAGGGAGGCCAGCAAAGAAACAAAAGGCTGAGGTAGAATCGAAGAACATCAAAGACATGTTCCGGAGGGTCACAAGGAAAGGAACGTGA</cdnaseq>

Protein Sequence

<aaseq>MASWCGDLAAPPRLLVAPRPSDGNCQGNVLSLRHPRSDEETGYLFIDGQLHEFNWFKERFGSWFLGDYVCEDGSLYYCTVVDPIFILLPILKAARMSNGKDPGKFRQLDEILYVEGYPGYQHLMGIAGNHIDLVCEVKEVANVKFFRLNDSKVLSWLCCKVHNLKEVFPKLGKNYAAQGEKELLKDAVQIIREYLNDEPWLTLLCKKLQLDIKEIIEANKTSEASFCAENSPVPFHPAEEKLGSSSTRSSKGRPAKKQKAEVESKNIKDMFRRVTRKGT</aaseq>

Gene Sequence

<dnaseqindica>1..55#427..483#648..749#1103..1179#1288..1411#1671..1735#2768..2837#3336..3411#3538..3628#3708..3830#ATGGCGTCGTGGTGCGGCGACCTGGCTGCGCCGCCCCGCCTCCTCGTCGCCCCTCGTGAGTGCCCCTCCTCCGCCCCCGGCCATCGTTGTGCTGCCTGGTCTGTTTAGGCTCGCATGTTTCAGGGCGGTAGTGCGATTAGTGATTCTAATTCCAAATCCCCAATTGGAAGCATCTGGTAGCAGTAGTTTGTTTTCGTCTTCAATTTTCAAGATTCCTTTGAGCTCGGTGGATTTATGTGGCTTGGTCGAAATGCCAGCGGACTTAAAAATTGTGCGAACTGAAGATTACCGCCTGAGTTTTTTGGTTGGGCCTTGGGGGTCTTTTAAACACTGGATTACGGAGCAATAAGTGTATCACATGGAGGAGCATCACATGCATAAATGTATAATCAGTTAATCACATCCCATTTTGTGTTTTCCTTGCAGGTCCTTCTGATGGCAATTGTCAAGGGAATGTTTTGTCTCTCCGCCACCCGAGATCAGGTGCTCTTATTCCTCCTTGCTTCTGTTTTCTTTGTCGGTTATTAAATCTGCACTAGTAATGTAGACTAATTTGGTAGCCTGTTAGCATCTGAAGAATAGCCATGCAGAAGTAGATTATCAGCATTCAACAGTTTTGCATTAACTCTTGCTTCATCATCAAACAGATGAAGAAACAGGGTATCTGTTCATCGACGGTCAACTTCACGAGTTCAATTGGTTTAAGGAGCGATTTGGATCTTGGTTCTTGGGTGATTATGTTTGTGAAGGTATGGCAGACACATAGCTATGCAGTTGTCATTTCTAAGAAAAACTTTGTATTTTGCCTTTATGGTAAGGTTTGTCTATTATTATCTTGTGTGGGCTATAGGAAGACATTTTGATAGGAATTATTGCCCTGCCTCTGAAATCACCCATTTAGATTTTGTTAGCAAGTAATTAAAATATGGAATCAGACAGACATGTTGTTAAAGGAGTGGTGCTATTCTTGTTCTAACACAGCAACATAAATAACTTCCAAATGGCACAATCTATTCCAGATAAAGTTTTTGAAAAATATCGTACTGCGGAGAAATTCAATACCTGAGTTTATTGACCTGCTGTCCTTCCTGACTTCTTGTAGATGGCAGCCTCTACTACTGCACAGTTGTTGATCCCATTTTTATTCTTCTACCAATTTTGAAAGCTGCACGTATGTCGGTATGCCAAATCAAATCAGAAATATTTCTAATATGAGGTTCACATTCAACATATTTGCCTGTTGAAAATTTGAAAAGCTAGTCCCTCAACAGCTTTACTGTGCTGCAGAATGGTAAAGATCCAGGAAAATTTAGGCAACTGGATGAAATATTGTATGTTGAAGGATATCCTGGATATCAACACCTCATGGGTATAGCAGGAAACCATATTGATCTGGTCTGTGAAGTTAAAGGTAGATGTTTGACTTGTATGTTTGTTCTGAAGTTAAATGTTATATGTAGTTAAATATTATAGCAAACTGCTGTCAGAATGCTGCCTACTTGTATTTGTAGTCCGGTGATTGTGCGGTGCATTTTTACCGCTTCATTACCTTGCTGAACTGAAACACTTATTGGATATGGATGTTTATGTTTCATCCGTGCTTTCCTGTGTGTTTTCATGGAAGAGAAGTTTTACTTAACCATCTCGCATGGATGTTTTCTTTCCTGCAGAAGTTGCTAATGTGAAGTTCTTTAGGCTGAACGATTCCAAGGTCTTATCTTGGTTGTGCTGTAAGGTTAGCTTGTGTCAGTAATTACATCTACTAACTCGATTTGCACTATGCTATTCCGCTGATACTTATTCTTATCAGAAGCTAACCCACCTTTTATCTTTACTTGTCCTTTTCATATTACAAAAGCAAGGATCTAACATGAAGTTAGGGTGGAATGTTGCTTATGTGGGTTAGGAAAAGAGGCATCTTATTGTTTTTAGACTGTTTGCCTTGAATAAGGATGCAACAATCCAACAAACTGAGCACAACATTGAGAATGTTGATGGGCTAAAACTTAATTCTTCCACACCATGTTTTAATTTATATTTGTATATAAACTATGTGCACCAAACATTAGTCTTTAAGTTCACTTTGGTTTTGAAGATGATAAATAAAGCATGAATTGGGACCCTAGTGAATTTCCTATATATTTAAGAACATGAATGCACATGGTCATTCTTGTAAACGTCCCTAAATAGGTGTCAGAGGGTAGTGGCTGCTATTCCTTGACTGCTGTTTGTAGCATTCTGCCTACCTTATGTTACAACCTTCTACAACCATTATAATGTACGTTGTGTTCCAGTACTGTTTATTTGTTGCATATTTCCTGCCATTTTCCAGTTGAACAATTTTACTTCATAAATTTCATTTAACTATGTTCTTGCAAAAATATAGCTAGCATGTGTTGTGCCCACTATAACACCACTGCTATCTGCTGTACCAACACTTTGCCACATGCTACATGCAACTCAAAACATCATACAATATTTTTGCATGATTAACCTAGTAATGGCTATTGTTATCTGCAAGAAACAAATGCCACTTTGGGATATCACTTAGATTTTTTAAAAAATCATGCTTCCTTGCAAATTCAAAATAACAGTTTGTCTTGGTAGCATCATGAGAACATACCAGTTCATGTGCCCTCATAATTTATGTTTTGATACGTCCTTTAGCTGTACTTAATATTCATGCCTGTGAATTTCGAATCATATTGATCTCACTTCACTTGTTACTCTGTAGTTTCGAAAATACTCTTATGAATCTCATATACAGGTTCACAATCTAAAAGAGGTTTTCCCCAAGCTAGGCAAAAATTATGCTGCCCAAGGAGAAAAAGAATTATGTATGTTGCTGCAACTCTTTTTGTTAAGTCTAATACAACTGTATTAGTCTATTATAAGAAGGATATAGCTCCTTGTAAACTTATGTTTCTGTTTATTTTTATGAGTGTTTTATCAACTGATATCCAAATGTACATAAACATTTTACCATTGCTAACTTTCACAATTATATGGTAATAAAAACTGTTTGAAAATGGATCATCAGTGTGATTTACATCCTATTGGATCACTTTTGTCCCAACCTTAATTAGTGAATCCACTTTGCATTACAAAATTGTCTGAGTAAACTTAAAGGAGATTTTGCTTGTGGAGGTGGATCTCCTCTAAAGAAAAGGATATATCAAATTATTTTTAAACATTTTAACTAAAGTTATGTAACTTCAATTCAAGATATTGCACAGGGATTAAATTCCTGAGTTACTTTTGAAGCACAACTCAAGAATTTTATGAAAATGTAAATCATTGTTCTAATGGAGCGGTTTCCATTGTTTTGGTTACAGTGAAGGATGCCGTCCAAATAATTCGCGAATACCTGAACGACGAACCATGGTTAACGTTACTCTGCAAGAAGTTGCAGTAAGACTTCTCCTTGCATTATGTTGAAGATTTTAGTTCAGTACAGACTTTTAATTGACTATGCATTTTTTTTCTCAGCGAAATCCGATCGACTATGCTCACATTGGTATAATGCATTCTCCACAGGTTGGATATCAAGGAGATCATTGAAGCGAACAAAACTAGCGAAGCTTCCTTCTGTGCAGAGAATTCTCCTGTACCTTTCCACCCTGCTGAGGTAAACTCCTTGAAGATGATCAGGGTGTTCTACACCGGATAGCTCATGTGCTATAAGCTTATTAATCGTGTTAACGCAGGAGAAGCTTGGAAGTAGTAGCACTAGGTCAAGCAAAGGGAGGCCAGCAAAGAAACAAAAGGCTGAGGTAGAATCGAAGAACATCAAAGACATGTTCCGGAGGGTCACAAGGAAAGGAACGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016601

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016601&oldid=65495"