BGIOSGA016632

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Revision as of 04:32, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016632| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016632, complete gene.| tag = OsI_163...")
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Gene Name

BGIOSGA016632

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016632, complete gene.

LocusTag

OsI_16377

Ensembl Transcript ID

BGIOSGA016632-TA

Ensembl Protein ID

BGIOSGA016632-PA

Length

4740

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22689778..22694517

Sequence Coding Region

22689778..22689945,22690309..22690394,22690714..22690762,22690835..22691015,22691184..22691332
,22691418..22691486,22692656..22692727,22692858..22693005,22693139..22693234
,22693760..22693830,22693959..22694074,22694189..22694234,22694347..22694517

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22689778..22694517 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22689778..22694517 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCAGGAGGATCTTCACCAAGGTCAAGACGAAGCAGCTTTAATTCTTTATCAAGAGATCTCGAACTCCCTTCAGAGCAAGGTTGTCTCTCTGTTATTGTCCTCGGGGCTTCTGGAGACCTAGCCAAGAAGAAAACTTTCCCGGCACTCTTCCATCTTTTTGCACAGGGATTTATACAATCAGGTGAAGTGCATATATTTGGGTATGCGAGATCAAACCTTTCTGATGATGGGTTAAGGGAACGCATTCGTGGATACCTCAAAGGAGCCTCAGAAGAACATCTCTCAGACTTTTTGCAACATATAAAATATGTCAGTGGTTCCTATGACAGCGGAGAAGGATTTGAGAAATTGAACAAGGAAATTTCAGAGTATGAGAAGTCAAACAAATCAGAAAGCCCTCGCAGGCTCTTCTATTTGGCATTGCCTCCATCTGTCTACCCTTCAGTCTGCAAAATGATCAGAACATATTGCATGAATCCATCTGGATGGACTAGAGTCATTGTTGAGAAGCCATTTGGAAAGGACTTGGACTCTGCAGAAGAATTAAGTGCCCAACTTGGGGAGCTATTTGACGAAAACCAACTCTACAGAATTGATCACTACTTGGGAAAAGAGTTGGTCCAAAACCTGCTTGTGCTTCGTTTTGCCAACCGCTTGTTCTTGCCTCTTTGGAACCGTGACAATATTGATAATATACAGGTTTTCTGTTTGGTTGCAATGGAAAAGCCTGTCTCTCTTAAGCCTGAGCACATTAGAGATGAGAAAGTCAAGGTTCTGCAGTCCGTGAACCCTATAAAGCATGATGAGGTTGTCCTTGGACAATACGAGGGGTACAAGGATGACCCTACAGTGCCAGATGACTCAAACACCCCAACTTTTGCATCTGTCGTGCTTCGGGTACACAATGAAAGATGGGAGGGTGTTCCTTTCATTCTTAAAGCTGGTAAAGCACTAAGCTCAAGGAAAGCAGAAGTCCGTGTGCAGTTCAAAGATGTTCCTGGTGACATCTTTAAATGTAAAAGGCAAGGAAGAAATGAGTTTGTCATACGCCTTCAGCCATCAGAAGCCATGTACATGAAACTTACTGTCAAAAAACCTGGATTGGAGATGGCCACCGAGCAGAGTGAACTTGATCTGTCATACGGGATGCGGTACCAAAACGTCAAAATTCCAGAGGCATACGAGCGTCTCATATTGGATACGATACGAGGAGACCAACAGCACTTCGTTCGCCGAGATGAGCTGAAGGCTGCTTGGCAGATCTTCACTCCCCTGCTGCACGACATCGACGAAGGCAAGGTGAAGTCTATTCCATACCAGCCTGGCAGCCGAGGCCCCAAGGAAGCCGATGAACTGAGCGAGAGGGTTGGGTATATGCAGACCCACGGTTACATATGGATACCACCCACCCTTGCATAG</cdnaseq>

Protein Sequence

<aaseq>MSGGSSPRSRRSSFNSLSRDLELPSEQGCLSVIVLGASGDLAKKKTFPALFHLFAQGFIQSGEVHIFGYARSNLSDDGLRERIRGYLKGASEEHLSDFLQHIKYVSGSYDSGEGFEKLNKEISEYEKSNKSESPRRLFYLALPPSVYPSVCKMIRTYCMNPSGWTRVIVEKPFGKDLDSAEELSAQLGELFDENQLYRIDHYLGKELVQNLLVLRFANRLFLPLWNRDNIDNIQVFCLVAMEKPVSLKPEHIRDEKVKVLQSVNPIKHDEVVLGQYEGYKDDPTVPDDSNTPTFASVVLRVHNERWEGVPFILKAGKALSSRKAEVRVQFKDVPGDIFKCKRQGRNEFVIRLQPSEAMYMKLTVKKPGLEMATEQSELDLSYGMRYQNVKIPEAYERLILDTIRGDQQHFVRRDELKAAWQIFTPLLHDIDEGKVKSIPYQPGSRGPKEADELSERVGYMQTHGYIWIPPTLA</aaseq>

Gene Sequence

<dnaseqindica>1..168#532..617#937..985#1058..1238#1407..1555#1641..1709#2879..2950#3081..3228#3362..3457#3983..4053#4182..4297#4412..4457#4570..4740#ATGTCAGGAGGATCTTCACCAAGGTCAAGACGAAGCAGCTTTAATTCTTTATCAAGAGATCTCGAACTCCCTTCAGAGCAAGGTTGTCTCTCTGTTATTGTCCTCGGGGCTTCTGGAGACCTAGCCAAGAAGAAAACTTTCCCGGCACTCTTCCATCTTTTTGCACAGGTAATTTGACTCCTGAGTCCTGACAATAACTAGCTGTTTCATGTACAATTTCCAAAATCTACACTACGAAAGGAACAATCTAGTGCACAGTCATTTGAGGCATTCCAGAGCAAAGGTTCAGTTACTCATACTTGATCACAAGTAAAAGCTCGAACACTTGTACTATTTTTTCTTCCCAGATACAGATAGTGGATATAGGACACAATTGAAAAGAATGCTGGAAAATTGCAGAGCAAGCTTCTTTTTATCCAGCAAGCTGTTTTTACGAACCACTCATAAAATCTTAGTCTTTACAAGCATGCAAAATGTGTGCAGTGCTATAATTCCCAGGTTATCGTTGATATTCATGTCCTTGTGTTACAGGGATTTATACAATCAGGTGAAGTGCATATATTTGGGTATGCGAGATCAAACCTTTCTGATGATGGGTTAAGGGAACGCATTCGTGGGTATGGTTTCTAAAAGCTGGGTTTTTGACATCTTGGCATATTGCTGCTGTATTTAGATATTTCTACTTCTTTTAAACATATCTAGCCACTGAATTTGAATGTTATAGCTAGGATAGTTGTCAATAAAAACATTTAATACTCTAATTATGGTCAATACGTACTAAAAACAAGCAGTACATGATCTGAGATACATTGTGTGTAATGCGGTGGCAGTTATATGTTCGACATCTTCATGAAATTGTATTTGTTTTTCCTGTCCCCTATGAAGTTCAATCATCAATTTTGCACATATTTATGCCTTTGTTGTATATTGCTACAGATACCTCAAAGGAGCCTCAGAAGAACATCTCTCAGACTTTTTGCAACATGTGAGTTGTTGTTTGTAATGTAACCACCATTTTGTGATGCGCACACGTCATTATGATAAATTTCTTTTTCAGATAAAATATGTCAGTGGTTCCTATGACAGCGGAGAAGGATTTGAGAAATTGAACAAGGAAATTTCAGAGTATGAGAAGTCAAACAAATCAGAAAGCCCTCGCAGGCTCTTCTATTTGGCATTGCCTCCATCTGTCTACCCTTCAGTCTGCAAAATGATCAGAACATATTGCATGAATCCATGTAAAGTTTCTTTACTATTCCATACGTTATTCTTTTTGGAATTTATACAAGCTATGCGCTCTAGTTGAACAAAAGCAATGAAGCATAAAGTTAGTGGAAAATTCAGGTCTTCTTGGAAGCATTTCTTCATCAAGATTCATTTTCTTTGCATAAATGTTCTGTTTGCAGCTGGATGGACTAGAGTCATTGTTGAGAAGCCATTTGGAAAGGACTTGGACTCTGCAGAAGAATTAAGTGCCCAACTTGGGGAGCTATTTGACGAAAACCAACTCTACAGAATTGATCACTACTTGGGAAAAGAGTTGGTCCAAAACCTGGTAATGGCTATAATTTTGTCAAGAATGTGGGATGATTTCCTCCGAATACTTGACTAACTACTTTTGAAACAATCGCATTTCACAGCTTGTGCTTCGTTTTGCCAACCGCTTGTTCTTGCCTCTTTGGAACCGTGACAATATTGATAATATACAGGTAAGCTGGTCAATAGTTGGTACTTAGCAGTAGGCAACTTATAGGTTATGATTCAAGAAGTCCAACTTTTATAAACTGCAGTTAATGCATCATGTAGAAGAAATATTTTGTAGTCCTCTTGTCAGTTGATTGCTGAACTTCTTTCTGTTTTTTGGTGGAGAACTGCTGTGTTCTACTGGTATAATTTATCATTGTCTGAATGGACTAATTGAATCTAAGAAACTAAAAATATAGGTATATTTCATTTGTACTATTTTAACAGTATATTGCCAACAATATGGCATGCCATAGTAGCTGCAATTTATAATCAATACAATCCTGCAGATTGTATTCAGGGAGGACTTTGGGACTGACGGGCGTGGTGGATATTTTGATCAATATGGGTATGTAGAAACATTACATTTCATTAGCACTTTTCTTAATTAAGTTTTCTATTATAAAATCGTAACCTTACAAGTCAAAAGTGTACATATGAGTATATTATCTAGAGCTAAGTGTTGATAAATTTTGGAAATATTTAAATTCTTTGTTAATTCTTACTGATTAAGAAAAGCATACTCTGCATTTCAGTGTGGAAATGAACATTTTGCTTTATTGAGTTTGCAAGCCAACATGGAAATTATAATTTTCAGTAACAGAAGTGTTCAGTACTGAATTCGAAGAGAGTGCATTCGCTTTGTATATGCCTTTCCTGCTATGAGTTAACTAAACCATTTAAGGATAATGTATACTGGATCATAGTCCTCTCTTTTTGCATAATTGTTTATTGCTTAAACATGTTTTACACCTCCCATCGTGTATCTCGTTGTTCCTCAAGGGAGTATCTAACGTTACTCTTGTTGCTGCAGAATCATTCGTGACATCATCCAGAACCATTTGTTACAGGAAAGTATTCTCAATATGTGTCAACATTCCATATGATATGATTTGCATCATTGTAGTAACCCCCACCCTGTCCTAACAAAGAAAACTTTTAGTACTTTAGTGACTAGGAAAGAAAAGCCTCTTCTTACATTAATTTGTTTAAAATTTATATTCACAGATAGTTTCATGCTGAATTATATATGGTCAAGTAGTACATGATAAATTCCTTGATGAGAACAATGTCTTTAGCCTTTAGGAGTTAACTGTTCCAACAACAATTTAATGAACTGTTGCTTCTTCTGCAGGTTTTCTGTTTGGTTGCAATGGAAAAGCCTGTCTCTCTTAAGCCTGAGCACATTAGAGATGAGAAAGTCAAGGTACTTTACCTTTCTCTATTCTCTACATGTCAATACTATATTGCAGCTTGCCAATACTATAATACTAAGAGTATTATGTTTTAGTCCGTTTCTTTAGTACTAAATAAAACCAGTTCCCTGTTAATGCCAGGTTCTGCAGTCCGTGAACCCTATAAAGCATGATGAGGTTGTCCTTGGACAATACGAGGGGTACAAGGATGACCCTACAGTGCCAGATGACTCAAACACCCCAACTTTTGCATCTGTCGTGCTTCGGGTACACAATGAAAGATGGGAGGGTATGTCTCTCATCAGTATATATACACATTAGGGTTCTGGAGAAGGACAACATTGATTTTCGTTTTCCCTTCAGATTGTCTTTCAGTGGACCATAATTCTTCATTTTAACTCTGTAATATTCATATCCTGCAGGTGTTCCTTTCATTCTTAAAGCTGGTAAAGCACTAAGCTCAAGGAAAGCAGAAGTCCGTGTGCAGTTCAAAGATGTTCCTGGTGACATCTTTAAATGTATGTGCTATAATTACGTGCAGTTCATATCATGGTGTACTCAACCCTTTTCTGACAATTTTCATGGCCTAACTATGTTTCCATTACTTCCTTATGAAATGACTGAGAATGCCTTAATGCCCGTACATAACTAAGCAGTAGAAAGCTATAACCATTTTCAGAAAATCCACGCATTGATGTGGAAGCTGAGAAAGCATTTAATTTGCATTGAATTGATCCATCGAGATAAGCTTTATGTTTTTGGGAAGTCTATTGTGTACAAAGCAGAAAGGTAGATAAACAAGTAAAATGGATCTTCACTCTTCGTTGCCTTGTAATTTAAGTTCACCTGACCTTACCATGGCATGTTAATACTGTTAGGCTGCTAAAATTCACCCATACGTTGTATTAGATACCACCGAGGTCTCAAGAAATTCAGTTGTGCAAATGCAGATACCTTTTTTTCCTTTTTTCTATCAGTATGTTCTTTTTTGTATCTTAATTGCATGTGGGTCTAACATTTGAACTAAACACATCCTGGTGAAGGTAAAAGGCAAGGAAGAAATGAGTTTGTCATACGCCTTCAGCCATCAGAAGCCATGTACATGAAACTTACTGTAAGTTCAGCTACTTGTGTAATACATAATACTCCTCTCCTTGGTCCTAAAGCTACTTCCCTACTCCAGTAAAATTTTATCACATTTTGAATGTTAGTGGTATAATATTAGTCAATGACTTCTTCCAGGTCAAAAAACCTGGATTGGAGATGGCCACCGAGCAGAGTGAACTTGATCTGTCATACGGGATGCGGTACCAAAACGTCAAAATTCCAGAGGCATACGAGCGTCTCATATTGGATACGTGCGTATCATCCTTCTAATTGTTCAAAATATCTTCCGTTAAAAAGATCTTTTCAACTTCACAGATAACGTAATCCGACCATATGCATTTGATTTAATACCCACATATCTACAGGATACGAGGAGACCAACAGCACTTCGTTCGCCGAGATGAGCTGAAGGTTTGTCAGTTGTCACCCTGCATACCTAAAACCTCTGAAGAGAAACTTGAATTCTGTTTCCAAGCCGTTTCGTTTCCGTTTTCTCCCTAACATATGGCACATGTGTGTCCAGGCTGCTTGGCAGATCTTCACTCCCCTGCTGCACGACATCGACGAAGGCAAGGTGAAGTCTATTCCATACCAGCCTGGCAGCCGAGGCCCCAAGGAAGCCGATGAACTGAGCGAGAGGGTTGGGTATATGCAGACCCACGGTTACATATGGATACCACCCACCCTTGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016632