BGIOSGA016644

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Revision as of 04:32, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016644| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016644, complete gene.| tag = OsI_163...")
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Gene Name

BGIOSGA016644

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016644, complete gene.

LocusTag

OsI_16399

Ensembl Transcript ID

BGIOSGA016644-TA

Ensembl Protein ID

BGIOSGA016644-PA

Length

5844

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22808768..22814611

Sequence Coding Region

22808768..22808894,22809691..22810111,22810198..22810238,22811221..22811324,22811536..22811600
,22811890..22812027,22812151..22812392,22812481..22812611,22813771..22813807
,22813900..22813924,22814012..22814144,22814498..22814611

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22808768..22814611 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22808768..22814611 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTTGCTCGAAGGTGCTTCTGTCGAAGAAGGGGGTGCTGGGGACGGTGTGGGTGGCGGCGGTCAGCGGCGTGGCGGCGCTCAGCCGGGACCAGGTGGTTCGCACCAACGTCGTCGCCTGCGTCGATAAGATTTTGCCTGATGACAACGACAAAACCACATACAGAGTATTGGGACTGCTTCTGCTTGGCATTGTTAGGATTTATTCCAAGAAAGTGGAATACCTCTGCCATGAATGCAATGAGCTTCTTGGATCATATGGATCAGCACATTGCAATGAACTAAGTATCCCAACTGGAGGAGCAACAAATAGAGTTTCAAAGCAAGCGAAGAAACCTGTTCGCGCAAGAAGATTAGTTGTAAGACAAGAAGGTGCTTACAAGGTAAAAATACCTATGCAAGCTGTGCGAACAACTAGAGCAGAAACAAGAGCTACTTCACAGATAACTGAAGTTCGAGACACACATGCTACACCTGATCTTCCAACTTTCACAATACCCAAAAGATTTGAGCTTGACTCTTTTGATTTGGGGATTCCTGAAGATAGGGATGATGATGACGTGGATCATCACCAATTGCCACATCAAGAAAATGAAGGAGAGCTGCGCTTCATTTCATTAAGAAAAAACAAACCACCCATACAACCAAGGGCTCACGAGCCCTTCACACATCTACAAACAGCACCACACAAGTCTTATAAGATGATGACATGCTCATACGCTGATCTAGACTCTGCCTGCATTATGCCAGTACGCGTTATTCTTCCACCTGAGATGGTGGATATGATGGCTGAAGTAAATGATCCTTCAGATAAAAGCACAAGGGGGAAAAAACCTCAAAGAGAATTGAATAGGGATGAGAATGGGAATTCTGCTTGCCACATCCCTTTGTCAGGAAGTAAGGAAGTGCAAATACCTGAAAATATTGTGGAGAATGTGACTTTTCCAAGTCGTGATGCAAATTGTCCCACAATTGAAGAATCAGAAAATGGGTCACTGCATGGAACTAACACAAATCCATCATGTGATGGTTTTGAGGAACCCGGGTCTCTTGAACAACCAACTTTGCGCTGTAAGACAAAGCTAATCAATGAGCTGTCACCTTCCACTCCGGAGCCCATGACAGAGGGTGGCACAGGGCTACCCTGCTCTCCTAAATTTATGGTTACTACACCAGCTAAAAAGGAGAAGCACCGGGTGACTAGAAAACGAAGAAGGGGATTATACAATAAAGATTATATACCAACAGATAGAGGAGACAAACGGAAGGATACTCATATGGATGAACAACATGCTAGAGATGAAGGTTTGCTGCGTTCAACAAGAACAAGGACTGTAGCAAGGTACTTCCATCAACTACTCGTGGACCAGAAGTGCCAACAACGGAACAATTCTGTATGCCTTGGTCAAGCACTCGAAGGAACGAAAAGAAAAACTTCAGCAAGATTCTTCTATGAAACTCTGATCCTGAAGAGTGGTAGTCTCATAGAAGTCAATCAAGAGCAGACTTATGGGGACATCATAGTCTCAGCGACTCCGCGGCTCGAGGCGGCATTGCGGAGTAGTGAGAAGCAATGA</cdnaseq>

Protein Sequence

<aaseq>MSCSKVLLSKKGVLGTVWVAAVSGVAALSRDQVVRTNVVACVDKILPDDNDKTTYRVLGLLLLGIVRIYSKKVEYLCHECNELLGSYGSAHCNELSIPTGGATNRVSKQAKKPVRARRLVVRQEGAYKVKIPMQAVRTTRAETRATSQITEVRDTHATPDLPTFTIPKRFELDSFDLGIPEDRDDDDVDHHQLPHQENEGELRFISLRKNKPPIQPRAHEPFTHLQTAPHKSYKMMTCSYADLDSACIMPVRVILPPEMVDMMAEVNDPSDKSTRGKKPQRELNRDENGNSACHIPLSGSKEVQIPENIVENVTFPSRDANCPTIEESENGSLHGTNTNPSCDGFEEPGSLEQPTLRCKTKLINELSPSTPEPMTEGGTGLPCSPKFMVTTPAKKEKHRVTRKRRRGLYNKDYIPTDRGDKRKDTHMDEQHARDEGLLRSTRTRTVARYFHQLLVDQKCQQRNNSVCLGQALEGTKRKTSARFFYETLILKSGSLIEVNQEQTYGDIIVSATPRLEAALRSSEKQ</aaseq>

Gene Sequence

<dnaseqindica>1..127#924..1344#1431..1471#2454..2557#2769..2833#3123..3260#3384..3625#3714..3844#5004..5040#5133..5157#5245..5377#5731..5844#ATGTCTTGCTCGAAGGTGCTTCTGTCGAAGAAGGGGGTGCTGGGGACGGTGTGGGTGGCGGCGGTCAGCGGCGTGGCGGCGCTCAGCCGGGACCAGGTGGTTCGCACCAACGTCGTCGCCTGCGTCGGTAAGCGATGCGATGCCCACTCCTCGGCCTCAGCGCGCGCGCGCGAGAGAGAGAAAAAAGTGCGTATTTTTCGTGGGTTTTTATGTCGAATTTGCGGTCTAGGTGGGAGGCAGTGGAACAGTGTGGGAGGCGGTGTGCGGAAGAGGGGTTTATCCGGGGCTTTAGGTTATAGAAATGAAGCGAATCATGTGATGAGAATCTGGTAAAAAAAGAAGAAGAAAGGGAATGGAATTTGAGAGGAGTTGTTTGCTGTCATGGCCTCGGTACCCTTCTATACTGTATTGTGGTAATCGTTGTGGCAATTTGATTTTCCATGTGAAATCTCGAGGTGAAAGGAAAAGGTAGCACCTTGGGTGTAATAACATGGACCTGTGGGTATGGGTTTTTGGATGGTGAAGAGTTTTGTACTTTGTAGATGGCATCGGTTTGGGGTTTGGGGTTTAGGGTCATTGTACGACGACGGTTCTACGTATGGTTCTATTAATAAGGCCCAAGCATATACCCAAGATTCGGGCGCCAACTAGGAATACCTTGTAATCCCTAAATTTAATAGCATTGAACAAATCTAGTAGTCCTGTAAATATTGTTTGGTCTGACTCGTAACGGAAATACAGGTGTCAAAAGTGTGGAACTAATAAGAAGGGAAATGCTATATCCAAAGCATATGAAACAAATTAGAACAGTAAATGCGGGTTGTGACATTTTATAACGCTTTCCTTTTCTAGATCGATTTATTTTTAGCATTCTTTCCCTAATATGCTCGTAACGCTTGCACATTTCCTCTTTCCCCTGGCAGATAAGATTTTGCCTGATGACAACGACAAAACCACATACAGAGTATTGGGACTGCTTCTGCTTGGCATTGTTAGGATTTATTCCAAGAAAGTGGAATACCTCTGCCATGAATGCAATGAGCTTCTTGGATCATATGGATCAGCACATTGCAATGAACTAAGTATCCCAACTGGAGGAGCAACAAATAGAGTTTCAAAGCAAGCGAAGAAACCTGTTCGCGCAAGAAGATTAGTTGTAAGACAAGAAGGTGCTTACAAGGTAAAAATACCTATGCAAGCTGTGCGAACAACTAGAGCAGAAACAAGAGCTACTTCACAGATAACTGAAGTTCGAGACACACATGCTACACCTGATCTTCCAACTTTCACAATACCCAAAAGATTTGAGCTTGACTCTTTTGATTTGGGGATTCCTGAAGATAGGTAACAGGTTTTGGTCCTATACTAGTTTTATTAGCTTGTTGCTTAAAATTGTGGTTTCTGATCTATTTTTAAAACTTTCTTTGTAGGGATGATGATGACGTGGATCATCACCAATTGCCACATCAAGGTAGAACTGCTGTGATTGATGTTTTTACCACTGCTAAGAAACCATTTTATTTACGTTCTGCATTCTTTTGTATAGGTACCATGTTGGAAGATGAGAATCACCATACATCCTGTTTGTTTGAGGTACACTGCTCTCTCCTGTATTGTCCACACCACTTACCGACACATGCATGCACAAAAAAAAAAACTTGATCAAGGGGTAGGACGTCGTCGTTGACTTAGCTTTAAAGAAGGTGCCCACTGAAACCTTGTGCAGCGATGTGGACAGAACTGTGGCACCCAGGATTTGAGCCCTGGGTGGGCGTCACCTTACTGGGTGCTCTACCACTGAGCTACACACTCCATCCAACACATGCATGCATACACGAGCTGTATTTAGTAACATCTGAAATGAAGAAATGGAAAAACTAACTAATGGTATGCATACTAGATAAGAAACACCTGGTATTGCTAAGCATTGATATAGGGTGGCCAGGTGAATGTGTTATCCAGTGATCCCAAAGTGAGGTAGGCTCCCAGGTAGCCGAAAGTACTACTCCCTCCATCCCAATGGTAGGTATTTCTAGCGTTCAAATTTGTCCCAAAATGTAGCTAATTCTCCACCTACCTCGTCATTTGAACCAAGCACAGCCATATCCCGTTAAATTTCTGCACCTACTTTCTCTTCTCAACCGATCACAACCTTCCACCATTCAACCGCACCTATTTTCTTAATTCCCGTGAAAACCTCTAGAACTGCTTACATTTTGGGACAAAGTACTGATTAGGCAAGCACTGTAGTTTTTGAAAAAAAAAAGGACTCGAGTCCGCTAATGCTTTGACTGGCATATACCAAGTCTGTGAATACCAGTGTGATGCTGGCTGCAGTCCTGTACCTTGTGCTAATTATTCTGTTCAACAATTTAGAGAACTGCTACAGGTGCCACTTGTCAGTTGCTGAGGGGTTTAGGGGGTTAGTTCTGTAATTGTCTTATTTTTTTTAGAAAATGAAGGAGAGCTGCGCTTCATTTCATTAAGAAAAAACAAACCACCCATACAACCAAGGGCTCACGAGCCCTTCACACATCTACAAACAGCACCACACAAGGTGATACACGACCAAAAAATCACCCTACAACAGCCTAGTGCCCTTGGGTTAGCGAATTACACCCAGGTTTTCATTTTTTCCCGTGTTATTTATAAATAATACCACATAATTGCTACTCCTTTATTAATTATTATCCAATAACCATGTCTTCCTTTTGTTTCGTATATTATCTGTTTGGGAAACTAAAGCCTTATTTTGGTCCAATGAACAGTCTTATAAGATGATGACATGCTCATACGCTGATCTAGACTCTGCCTGCATTATGCCAGTACGCGTGTAAGTATAGAGATTACTGTCTCAATGATGCTAAAAAAGATTATCTGTACCGAATTTCTGAATGAAGCTTCAATGCAGCACTATCCCAACTGAAATGATGAGTGTCATTAGTGAAGTCAACAGTCTACTATGCTTGAGTAGCATTGGGGGTGAACCTGAAAATCACAATGCTGAATCTGCTTGCTTTACACCAGTGAAGGAGTAAGTATATATGGTGTCACATTTCTCTCTTTACAGTGCGCATACTTTTCCTCTGTTGCCGATGACCTTTTTTTTTTTTCTGGAACAGTATTCTTCCACCTGAGATGGTGGATATGATGGCTGAAGTAAATGATCCTTCAGATAAAAGCACAAGGGGGAAAAAACCTCAAAGAGAATTGAATAGGGATGAGAATGGGAATTCTGCTTGCCACATCCCTTTGTCAGGGTAAGTAAATGTTACTTTTGTGGTTTTACCATATTATGATTTTAATGTCACATCAATTTTTTTTTACTTAAACATTTTTGTGAAAAAATAGTGCATTGATGCTGACCATATTTATTGGTACAGAAGTAAGGAAGTGCAAATACCTGAAAATATTGTGGAGAATGTGACTTTTCCAAGTCGTGATGCAAATTGTCCCACAATTGAAGAATCAGAAAATGGGTCACTGCATGGAACTAACACAAATCCATCATGTGATGGTTTTGAGGAACCCGGGTCTCTTGAACAACCAACTTTGCGCTGTAAGACAAAGCTAATCAATGAGCTGTCACCTTCCACTCCGGAGCCCATGACAGAGGGTGGCACAGGTTTAATTTTTGTGATAAAAATTCCTCTTCTATTTGTGGTCATTATTATGCTTAATTTGTGATGTGTGGGTTTCACTGATTTATTCAGGGCTACCCTGCTCTCCTAAATTTATGGTTACTACACCAGCTAAAAAGGAGAAGCACCGGGTGACTAGAAAACGAAGAAGGGGATTATACAATAAAGATTATATACCAACAGATAGAGGAGACAAACGGAAGGTTAGAAGAAGAGGAACATGGGTATTGTATGATGAAAATATTGTTCTACCAAATGAGTAAGTAGAGCTTCTAGCTTAGAAGCTCTTCCATCTGTTGCACTACCTATTCCTGTTTGATCTTTTAGGTATCCTAGGAGCTGGTTTGGCAAACTTAGGCTCATCTTATCAGCTTAAGCAGGGATTTGGGATTCTTTGATGAATCTAAGTTCTCAGCTTCTTCTTCTTCCTTTTTTTTTTTGCTAAGATATTTAAGGCTCAAGGCAAGGTACTGTAAGTTATGAAGCCTATAGCCTCATAAAGAATTATAAGCTGAGAACCAAGATGCTTGGTTGGCTGGCCCTGAGGATGTTTGTGTTGTCCACTGGGATTCAAATCCTTAAAACATGTGCTCTCATTGGTTCTACCTGTTTGCAGTGGGAACCAGCGATCATGGCTGGGGTGCTAGCCTCTTGTTCCCGCACTTTATTTTTGTTTGGGGGCTTGGGTTAGGTGGTAGGCTGCAGTGCCATACTATTTTTTATGTGATCAATGATCATGTAGTATAAGTTGGAACATTAATTTTTCAATATGTGGTACTTCTCTATTTTTAATTGCTAATGCTTTGGATTTTTTTCCTCCTTAATGTAGAACATTGAGAAACACAATAGAGGATGCAAGTGATCTAGTGCAGCAGAGAAGGAAGGCACCTCATACTTGTCTTTATACCTGGAAGGAGGGCAAAATTCGTTCTCTGCCAGTTACTTTCATGGATCCATTGATTTTGTGTAAGTCTTCATCTATACTAGGTGCAATTAGTGATGGAAACCTCCATAATTAACTAAAGAGGGGCCATTTTATTTTCACAGATCCAACTTCGGTGTACGTTAGACACACTATTACAGCAGATACACCAGAAAATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGAATGCATTGAAAAGTAAAATCCACAGCTCGACGAGGCATTGGATGCTGATATAGATAGTATGGAAGAGGTAACACTGTCTACATTAAACTCTTTTATAAAATTCTTTTGAAAATATCTGGTTTTGTGTGCAAAATGCCATGCAAACAATTCATTTGTTAATGTATATTTTATGCAAATGAATCATTTGAAAATTGCATCTGGCAGGATACTCATATGGATGAACAACATGCTAGAGATGAAGGTACTCTTTTACACCCTATACTAGTTTTTATTTTTCCTGTACATTAGATCTTTGTTTTTGCCAAGTTCTACTGACATTGTTATTTTGCACAGGTTTGCTGCGTTCAACAAGAACAAGGTGGCTAATGAACTTGTCCTGTTTCTTTTCATTTCTTTTCTTCATGTTGTCGTTAACCTATAACATTCTCTAAATGCACTAATTCAGGACTGTAGCAAGGTACTTCCATCAACTACTCGTGGACCAGAAGTGCCAACAACGGAACAATTCTGTATGCCTTGGTCAAGCACTCGAAGGAACGAAAAGAAAAACTTCAGCAAGATTCTTCTATGAAACTCTGGTACATTTTCTGTACTTATTTCTTGGACACAGTATCTGCATGAGTTTTAGTTGCTTTTTCACTGGAGAATGACTGGTCTTGAGGATCCCATCTTGTGTATTACTGATCTATTTCAGTTCTACGCAAGAACAATCTTCCTTGTGATAAAATTAATATGTGCATTTTTTAGTGCAATTCATGTGCTTTACTTGGGAAATATGCAAGCACTTCTTTGGTTCCATTTCCGTTCTGTTTATCAAAACTCAAAAGTTGTTTGTTTGTTTCATATTTTCAACTCCTATAAGTATAACAGAGGCCCTATGATCCTTACAGCAATTTGTATTGTTTATATCGTCGTTTGCTCTCTTCTGCAGATCCTGAAGAGTGGTAGTCTCATAGAAGTCAATCAAGAGCAGACTTATGGGGACATCATAGTCTCAGCGACTCCGCGGCTCGAGGCGGCATTGCGGAGTAGTGAGAAGCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016644

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016644&oldid=65538"