BGIOSGA016666

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Revision as of 04:33, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016666| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016666, complete gene.| tag = OJ99052...")
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Gene Name

BGIOSGA016666

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016666, complete gene.

LocusTag

OJ990528_30.4

Ensembl Transcript ID

BGIOSGA016666-TA

Ensembl Protein ID

BGIOSGA016666-PA

Length

1892

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23086660..23088551

Sequence Coding Region

23086660..23086791,23086957..23087019,23087150..23087216,23087295..23087395,23087558..23087602
,23087712..23088173,23088381..23088551

Genome Context

<gbrowseImage1> name=IndicaChromosome04:23086660..23088551 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:23086660..23088551 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGACGCCATCACTGCTTGTTCAGTGTTTCCCTGGCTTGCTTCCCAGCAAGGCTACGAGTTGTGTGCCAATTGTATCAGAAAGGGATCTACAGCTACCATCACCAGCTGTTGAGATAATCCCATCAAAGAGTGCTCATCCTTACAAATATGCTGGCGAGAAGGTTGATGTTCAAGGTCTTGACATTTTCAAGGGGAAGGTCAGTGTAGCGGATATGATAGCCTTCTCCCCTTCTGAAGTAGTAGCATCCAAATATGATGGATCTCTGAAATATTGGGAGAGTTCCATTACTCTCGTCAACATTATTAAAAATGAGATCCGTGATGGGCAGTTGAGCTTCAGGGGCAAGCGGGTTCTAGAGCTTGGTTGTGGATCTGGTCTGGCTGGGATTTTTGCCTGTTTGAAGGGTGCATCCACAGTTCATTTTCAGGACACAAATGCAGAAACAATAAGATGCAGAGCAATACCCAATGTGCTTGCAAACCTTGAGCAGGCTCGGGACAGGCAGAACAGACCATCAGAGAGCCCTGTTACACCATCACGACAACTGTTAGCCCCAAACGTACATTTCTATGCTGGGGACTGGGAGGAGCTCCCTACTATTCTCTCAGTTGTACACCCACCTGCAGCACCAACAAACCTTAGCTTCTCAGAGGACGACTTTATGGATGGCTGCAGTAGCCATGATGGGAGCAGCATAGTTGGTGTCGACAATTGCCCCAGGCGATCAAGGAAACTTTCTGGTAGCCGTGCATGGGAGAGGGCCAGTGAGACAGACCAAGCTGATGGAGGCTATGATGTAATTTTGATTTCTGAGGTCCCCTATGCGGTGAACTCTTTGAAGAAGCTCTATGCCCTTATCACAAAGTGCCTGCGACCCCCATACGGAGTACTGTATGTGGCTTCAAAGAAGAACTTGGTTGGTTCCAATGGCGGCGCAAGGCAACTCAGAGCTTTGATGGAGGAGGAGGGTGTCCTTGGTGGCCACTTTTTAACCGAGTTAGCTGACCGGGAAATTTGGAAGTTCTTCTTCAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MKTPSLLVQCFPGLLPSKATSCVPIVSERDLQLPSPAVEIIPSKSAHPYKYAGEKVDVQGLDIFKGKVSVADMIAFSPSEVVASKYDGSLKYWESSITLVNIIKNEIRDGQLSFRGKRVLELGCGSGLAGIFACLKGASTVHFQDTNAETIRCRAIPNVLANLEQARDRQNRPSESPVTPSRQLLAPNVHFYAGDWEELPTILSVVHPPAAPTNLSFSEDDFMDGCSSHDGSSIVGVDNCPRRSRKLSGSRAWERASETDQADGGYDVILISEVPYAVNSLKKLYALITKCLRPPYGVLYVASKKNLVGSNGGARQLRALMEEEGVLGGHFLTELADREIWKFFFK</aaseq>

Gene Sequence

<dnaseqindica>1..132#298..360#491..557#636..736#899..943#1053..1514#1722..1892#ATGAAGACGCCATCACTGCTTGTTCAGTGTTTCCCTGGCTTGCTTCCCAGCAAGGCTACGAGTTGTGTGCCAATTGTATCAGAAAGGGATCTACAGCTACCATCACCAGCTGTTGAGATAATCCCATCAAAGGTACATTTATTTTTTCTGATTTGGCTGTCATTTGTATATAAAACTCCAAAAGAAATACTTCAAATGTTTTGCAGCTGTCTGTTATACTGTCGATTGGTGTTCTTTTTGGGATTGTTTTCGTGGGTAAACAATTTAATAAGTATGTCTTGATCCTTTTTATCTCAGAGTGCTCATCCTTACAAATATGCTGGCGAGAAGGTTGATGTTCAAGGTCTTGACATTTTCAAGGTAAGCAGCACATGCATATTCCTTATTTTGTTAATTTTCAAGTTGGCTAGTTTCTTTCCCTTGCTACCATCAAGTTATCAAATATAAACATCAAACACCAATGTTTTAATGTGTTCTCCTTATGCTTCAGGGGAAGGTCAGTGTAGCGGATATGATAGCCTTCTCCCCTTCTGAAGTAGTAGCATCCAAATATGATGGTAAGGGCATAACGAATAAGCACATCTTATATTTTCTTTCCTCCATACCATGGAGTCTTATTCATCACTTCTTCTCAGGATCTCTGAAATATTGGGAGAGTTCCATTACTCTCGTCAACATTATTAAAAATGAGATCCGTGATGGGCAGTTGAGCTTCAGGGGCAAGCGGGTTCTAGAGGTAACTTCCCATGAGAAAACTGGCATCGTTGGCTAGCTGTTACAGATTCTTCATTTAGTTATTTAGTAGATGCTTTGTGCTTGCATTTGCTTTCATCGAATCAGAATCAACTAGATAATTTGGACTCATGCATAACTCACTTCCTTTTGAAAATTGATGCAGCTTGGTTGTGGATCTGGTCTGGCTGGGATTTTTGCCTGTTTGAAGGTATTTTCATCTTTCCATTGCTTCTGACGATTATCAATTTACTATATCTTTGCTTTCAGTTATCTTTACCCAGAATACTGATTGACTGAATGCTTCGATGCTTCCTCAGGGTGCATCCACAGTTCATTTTCAGGACACAAATGCAGAAACAATAAGATGCAGAGCAATACCCAATGTGCTTGCAAACCTTGAGCAGGCTCGGGACAGGCAGAACAGACCATCAGAGAGCCCTGTTACACCATCACGACAACTGTTAGCCCCAAACGTACATTTCTATGCTGGGGACTGGGAGGAGCTCCCTACTATTCTCTCAGTTGTACACCCACCTGCAGCACCAACAAACCTTAGCTTCTCAGAGGACGACTTTATGGATGGCTGCAGTAGCCATGATGGGAGCAGCATAGTTGGTGTCGACAATTGCCCCAGGCGATCAAGGAAACTTTCTGGTAGCCGTGCATGGGAGAGGGCCAGTGAGACAGACCAAGCTGATGGAGGCTATGATGTAATTTTGATTTCTGAGGTCCCCTATGCGGTGAACTCTTTGAAGAAGCTCTATGCCCTTATCACAAAGGTCAGTTCCTCACTTGTTATCGCTGTTTTGGCTTTTCATGTATTATGCATCTAGATCAAGCTGTGATTTGTGATGGAATAAATGAGTTGAAGCTTCTAAACCTCTTTCTTTGAGTAGGACAATATTGCTAGAGTAATTTTTAATTGATGCACTCAACTATAAAGATCCACAAGTGCTAATACGGCGTCGTTTCTGCTATTCTTGCAGTGCCTGCGACCCCCATACGGAGTACTGTATGTGGCTTCAAAGAAGAACTTGGTTGGTTCCAATGGCGGCGCAAGGCAACTCAGAGCTTTGATGGAGGAGGAGGGTGTCCTTGGTGGCCACTTTTTAACCGAGTTAGCTGACCGGGAAATTTGGAAGTTCTTCTTCAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016666