BGIOSGA016744

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Revision as of 04:34, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016744| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016744, complete gene.| tag = OS04G05...")
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Gene Name

BGIOSGA016744

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016744, complete gene.

LocusTag

OS04G0509000

Ensembl Transcript ID

BGIOSGA016744-TA

Ensembl Protein ID

BGIOSGA016744-PA

Length

5673

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24146904..24152576

Sequence Coding Region

24146904..24146952,24147939..24148067,24148227..24148319,24148521..24148793,24149575..24149958
,24150083..24150323,24151826..24152576

Genome Context

<gbrowseImage1> name=IndicaChromosome04:24146904..24152576 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:24146904..24152576 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCGCGGCGAGCGGCGCTGCTCCTCCTCGCTCTCGCCGTGTATGTGCCACTGGGAACGGCAAGCTCAACAACTATCGCGTCGTACTTACTTGGGTTATGGAGTAGAGCACATCGGCATTCTCTTCCTGCCCCTGCTCCAGCTCCAGCTCCAGCTCCAGCCCCTGAAACTCACCGACCTGGTATTAGACACCCAGTGCCTAGGCATCACAGGAAAAGGCCTCATGTTGCCCCACCACTACCACCACCATCATCATCAGAAAGACAAGTAGCACCATATCAGTTGTTTCCAAGAATTGATGAGTTAGAAATTGAGATTGCAGCAGGAACATTTCTGAAACAGAGTCAAGTTCGGATAATGGGTGCTGGGAGTAGTCTTCAAGATCCTGAAAAAACTACTGTCACCGTTGATTTGGTGCCACTAGGTCAGAAGTTTGATAGGACTTCAGCCTTACTGACTAGCAACAGATTTTTGCAAAAGAAGGTGCCAATAAACTCGTCCATATTTGGTGATTATAACGTAATATATGTTCATTATCCTGGTATGAGGTCATCATTCTCCAGTATGACCAGCTCGACGGCATCTTTTGTTTCAACAATTGCAACATGCCCACCTACAGTTAAGACATTCTCTATTTCTGAGCTTGAAAAGGCCACAGAAAACTTCAGCTTCAACAAAATAATAGGTGAAGGAGGGTATGGCCGTGTTTATCGAGGTACAATTGATGATGAAGTTGATGTTGCAGTCAAATTGCTTACAAGAAAACATCAAAACAGAGATCGTGAGTTTATTGCCGAGGTTGAGATGCTAAGTCGTTTGCATCATCGTAATCTTGTCAAGCTGATCGGTATATGCATTGAACGGAGCACAAGGTGCTTGGTGTTTGAGCTTGTTCCAAACGGAAGTGTGGAGTCTCATCTGCACGGTTCTGATAAAATATACGGCCCACTTGATTTTGATACTAGAATGAAAATAGCCCTTGGTGCAGCAAGGGGTCTGGCCTACCTACATGAGGATGCCAATCCCCATGTTATACACCGTGATTTCAAGGCCAGCAACGTTCTTTTGGAAAATGATTTCACTCCCAAGGTTGCGGATTTCGGGTTGGCAAAGGAAGCCTCAGAAGGAATGGACCATATTTCTACTCAGGTCATGGGGACTTTTGGGTACGTTGCCCCGGAGTATGCGATGACCGGGCATCTCCTGGTGAAAAGCGACGTGTACAGCTACGGTGTCGTGCTGCTGGAGCTCCTCTCGGGGAGGAAGCCGGTGGACATGACGCAGCCGCCGGGGTCGGAGAACCTCGTCACCTGGGCGCGCCCCCTCCTCACCGACCGGGACGGCCTCCAGCAGCTGGTCGACCCGTCGATGCCGGCGGCGAGCTACGGCTTCGAGAAGCTGGCCAAGGCGGCGGCCATCGCGTCCATGTGCGTGCACGTCGAGGCGTCGCACCGGCCGTTCATGGGCGAGGTCGTGCAGGCCCTGAAGCTCATCTACAACGGCAACAACGACGACACCTGCACCAGCGGCTCGTTCGGCGGCGGCGGCGGCGAGGAGTACGAGGACGAGGAGGCGTCGTCGCCGTGGAACAACCGCTCGTGGAGCCACGACTTCGCCGCGACGCCGCCGCCGGCGTCGCGCAGGCTGGCGTTCCCGCGGGCTCCGGCCCGCCCGACGACGATGGACTACAGCTCGGACCCGGCCGACGGGGCGGCGGGGACGTCGTCGGCGTCGGCGCGGCGGCAGCGGTCGACGTCGAGCCTGGTGCTGGACAAGATCGAGTCGCTGGCGGCGTACGACTGGTCCGGCCCGCTGAGGGCCAGCAGGGGGAGGAACTTCTACAGGCTGAGGGGAAGCATGAGCGAGCATGGCGGCCATCCTTCCGAAGATTGCTCCATGGAGGGCTACTGGATGTAG</cdnaseq>

Protein Sequence

<aaseq>MPPRRAALLLLALAVYVPLGTASSTTIASYLLGLWSRAHRHSLPAPAPAPAPAPAPETHRPGIRHPVPRHHRKRPHVAPPLPPPSSSERQVAPYQLFPRIDELEIEIAAGTFLKQSQVRIMGAGSSLQDPEKTTVTVDLVPLGQKFDRTSALLTSNRFLQKKVPINSSIFGDYNVIYVHYPGMRSSFSSMTSSTASFVSTIATCPPTVKTFSISELEKATENFSFNKIIGEGGYGRVYRGTIDDEVDVAVKLLTRKHQNRDREFIAEVEMLSRLHHRNLVKLIGICIERSTRCLVFELVPNGSVESHLHGSDKIYGPLDFDTRMKIALGAARGLAYLHEDANPHVIHRDFKASNVLLENDFTPKVADFGLAKEASEGMDHISTQVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMTQPPGSENLVTWARPLLTDRDGLQQLVDPSMPAASYGFEKLAKAAAIASMCVHVEASHRPFMGEVVQALKLIYNGNNDDTCTSGSFGGGGGEEYEDEEASSPWNNRSWSHDFAATPPPASRRLAFPRAPARPTTMDYSSDPADGAAGTSSASARRQRSTSSLVLDKIESLAAYDWSGPLRASRGRNFYRLRGSMSEHGGHPSEDCSMEGYWM</aaseq>

Gene Sequence

<dnaseqindica>1..49#1036..1164#1324..1416#1618..1890#2672..3055#3180..3420#4923..5673#ATGCCGCCGCGGCGAGCGGCGCTGCTCCTCCTCGCTCTCGCCGTGTATGGTATGTTCCTTCAAGATTGTGTGTTTCTTTTCTTTTTTTTTTCTTTCTACCCGCTGTTCTTCTTGCCCGGCCGGGCGGGCGATTTCTTCGGGGTTTGAGGTTGCAATGCGGAGTGGAATTGTTGTCTGGTTTGTTTCGTTGCAATGGGATCGCCGGCCTGGAAGAAGAGCGGTCATGGCTGGCTGGCTTGCGTGGCACGTTCCCCAGGGGTTGTGGAAAGATGGTTTCGCCTTTGCTTCATGGAGCTGTTCCTCCTGTGATTCGTCCGAGCGCATCGGCATCTGAATCCAGTAGGCGTGGACATGGCGTAGATTCCCGTCAATTTTCTCCTTTTGATTCTCCTCTCTTTCCCTTTCTTGAATCAACCCATGCCGAGTCTGAGAAAGTTTGGAATTTTTATGCAAATCTGTTGTTAAAAATTTGCTGCATTGGCGCTGCCCGCAGCGATTTTCGGTGGGCTTTTACTACGCTTGATTTGCCGGCTTAAACCCACCGCGTTTCAGTACTGCACCAGCTGTAGTGGTTGGTGTGCATTTGCCTTTCTGTTGTATTGAACCGAAAAAGTTAACAAGCTTTTGGTGCAATGCTCGATTAGTGGTCAAGGTTTTTGGCGAGGTTCCTGCTGTTCTGTTCTCGTCTTGCAATCTTGCAGACACATAGTTTTCGTTGCACTCTGCATTGCTCATCTATAGTAATTTTCTTGTTTTTAATCAAACTGTAATTTTGTAGTAATTCGCACTCATTCGTCCTGCATTATCTGTAATATTTGGCTGTAGTTTCTTCAAAACAAAGGCCGGAATGAATTCCATTATCTAAAAAAAATATATACAGTGGCGTGCAAAACCGTGTGAGTTACTGCATTAGTATTCCAGTTTCCACTCCATGAAACATATGTTCATTGTAGTTATGCTGAAGTAATAGTTAAGAGTATACAGATGTTATGTATCATATGAACAGCATTTTTTTTTGGGTCAATATCCTTGCAGTGCCACTGGGAACGGCAAGCTCAACAACTATCGCGTCGTACTTACTTGGGTTATGGAGTAGAGCACATCGGCATTCTCTTCCTGCCCCTGCTCCAGCTCCAGCTCCAGCTCCAGCCCCTGAAACTCACCGTAAGTAGAAATACTGTTGAAATTTGTACACTTAAATAGTAATTCAGGTGTAACATGTTCTGCAAACTTAAATATTTATTTCATCAGTATTCTTACATTCAATGATTTTCTTGTTGTCTTGAACCGTCTTGTAATTTTGTCGATCATTTTGGTTCTCAGGACCTGGTATTAGACACCCAGTGCCTAGGCATCACAGGAAAAGGCCTCATGTTGCCCCACCACTACCACCACCATCATCATCAGAAAGACAAGGTTCTACTTTTCTCTACTGACCAATTGAGATTGCAAATCTTAGTATTGTTAGCACTGAAGGACACAACAATAATAGACGCGTTTGTGCCTGCAATGTAACAGATTGCAGTGGGATTTCCTGTACTGCTCCACTCACATCTACTCCAATCGGCTCCCCCTGTGGCTGCGTATATCCCATGCAAATTCAACTTGATCTTGTAGTAGCACCATATCAGTTGTTTCCAAGAATTGATGAGTTAGAAATTGAGATTGCAGCAGGAACATTTCTGAAACAGAGTCAAGTTCGGATAATGGGTGCTGGGAGTAGTCTTCAAGATCCTGAAAAAACTACTGTCACCGTTGATTTGGTGCCACTAGGTCAGAAGTTTGATAGGACTTCAGCCTTACTGACTAGCAACAGATTTTTGCAAAAGAAGGTGCCAATAAACTCGTCCATATTTGGTGATTATAACGTAATATATGTTCATTATCCTGGTGAGTGACATATTTTTTTGTTGACATCAACTTCAATAGTATAATTCCCAGTATTGCTGTATGTAATCATAGAAATTTTGCAGGCCTGCCTTCTTTGGTCCCTAGTGTTCCAGGATCCTTGGGCCCAATAAGCAGTAGCCAATACCCCTTTAGTGCAAATGTACACAATAGAAGACATCAGAAGATTAACTCTAAAAGTGTTGCCATAATTGCATTATCAGCTGTTGTGCTTGTATTAATGAGCTTTGGCATTTGCATCATATGGAAATATAAAGGATTTGAAAAGTCTCGTGGCACTGGTCGTGTTTCGAATTCGTCAGCCACAAGAAAAACAGGTAACTTTTGGCAGTCCTGGTACATATGCTACCGTTATAATATGTCCTGTTATATCCATTTTGCATTTAGACACCCTCTGTTCTCGAATAACTAATACTGTTGAACTGTTGACTATTGGCATCTCACTTTGATCACAAATTACTTTTAAACTATGAGATTACGATGAATGAAATTTGTATGTTTATACTTGTGATGCCACACACTTTGACAATATAACATATTTTCAAGTATTTATTTTATTTTATTTTATTTTTTGCTAAAGGAAGAAGTGGTCAAAGTTTGAAAATAAATAGTTCCAGTATCAGTTATTCGAGAATGCAGATAATGTTAATTTGCAAGTTCAATTTTGGCCCTTTTTTTGTGTGATTCAACATGAATAGTAAAACCTTACTTTTTGACTGTGTAATTCCCTTGCTGTTTGTATAACATCTTGTTTCTGTTTCAGGTATGAGGTCATCATTCTCCAGTATGACCAGCTCGACGGCATCTTTTGTTTCAACAATTGCAACATGCCCACCTACAGTTAAGACATTCTCTATTTCTGAGCTTGAAAAGGCCACAGAAAACTTCAGCTTCAACAAAATAATAGGTGAAGGAGGGTATGGCCGTGTTTATCGAGGTACAATTGATGATGAAGTTGATGTTGCAGTCAAATTGCTTACAAGAAAACATCAAAACAGAGATCGTGAGTTTATTGCCGAGGTTGAGATGCTAAGTCGTTTGCATCATCGTAATCTTGTCAAGCTGATCGGTATATGCATTGAACGGAGCACAAGGTGCTTGGTGTTTGAGCTTGTTCCAAACGGAAGTGTGGAGTCTCATCTGCACGGTATGTACACTTATTTAGTCTACACCATTGGCATATAAGAATCTTTGGTACATTTTCAGCACTTTCCTATGCTTCATTATACATTGTTGTGATCTGCATATTTACTTCTGTTTTGATGTTTCAGGTTCTGATAAAATATACGGCCCACTTGATTTTGATACTAGAATGAAAATAGCCCTTGGTGCAGCAAGGGGTCTGGCCTACCTACATGAGGATGCCAATCCCCATGTTATACACCGTGATTTCAAGGCCAGCAACGTTCTTTTGGAAAATGATTTCACTCCCAAGGTTGCGGATTTCGGGTTGGCAAAGGAAGCCTCAGAAGGAATGGACCATATTTCTACTCAGGTCATGGGGACTTTTGGGTAAGTCGCATTCTTACCATATTCACCTGTGGCTATTATATCACCCCAAAACACACTAAATTTGTAAGGAGAAAAAGAAGAAGATAATTTAGTCATACACTAGTACACCACAGTAGATTATCAATCTTGTAGGATCGAATCACAAGAACTAAGCCAACCAGAGGGGGGGCGGGGGTGAATGGTTGGTATACCCCAAAACCCAAACTTTTAGCGGAAATAAAAGTTACCCTCAAATTCGATGTAGATCGGACTGAACGAGGTTGATCCGCCGGTCTGACCGCGCTTGTGCCGCTGGTCTGACCAGTGTTGATCGCCCGGTTCAAAAGCCTGAAGATCGCCTGCCGCGCCTGAAGTCGTAGCAGGTCTGACTGCCTCTCCTCCGTCGGTCTGACCGTCGCTATGTCGTCGGTTAGACCGCCGAACCTGATGAAACACAAATCGAAGAACTCTTAAAGTAGATGACAACTTTATTGCTTCCCTCTGTGTTTACAAAGTGCACCAACAACACTCCTTACAAAAATTTCGACTAAACTCGAAACCCTAACTAAACTATCAACTCAATTGCTCTCAACAGCGATACCGGGAAACCTCACACTCCCTCTCTATTTATACCCAAGGTAGGCAGCCTAAAGCCACGAACCAAATTCATACTAGAAGTCCTAATCACCTTAGGAAACCCTCTAGTACAAGAAACAAACTTTACATAACCAATCATACCAAATTTGGACTCCTTTCAAATTCGACTCCGCATCCCATACGCACACAATACCTCCATCGTATGCCATATGGAATCTTTACCAACCACGTGCATTGAACTCTAGCCTTAGTATCTCGCATGATATCTGACCACCACGGACATCGCCTTACCACCAAGTCGACTCCCGGTCCAACTTGACTCTCTCGAGGCATCGAGTCACCTACACATGAAACAAACAAAGAAACCATATTCCGAGACCAAGCTATCCCCAACTTGACTCATTAGTAGCAAACAACAGTATTACATACGCATAGTATCCTTCTAGAAGCCATAACCATGAAACAATCACGGATATCCAAACAAACAAACTAAAACCGACACAGTGTCGGCCGGCCAGACTGCGGGCTAGCCGGTCTGACTGCTCAATCATCACCGGTCCGACCGGCACACACTGCCCGGTCTGACCGGACCCAAAACACAGCAGATCACCTGTGAAATCCAATCATCTTCAAAACCACTTCGTAAATAAATTTCAAATATCAAAACCAATAAACGTCAATGCCAATTGTTCATCACAGAATAACAATCAAAAACACATTTGATTTTACAAATCTTGATTGTAGTGATAAATTAAATATTTCAATAAATAAATTAATAATTAATAAAGCTGTGATCTAAACAATACAATAGACGAAAGCTTTCTGAGAAATCGTATTAGCAAATAATTAACGGCGATGATATTGTGAATAATAAGCTGAAAAGAAAGTTTAACTTTTGATCGATTTCTTTTTGTCATGGTCTTCAGGTACGTTGCCCCGGAGTATGCGATGACCGGGCATCTCCTGGTGAAAAGCGACGTGTACAGCTACGGTGTCGTGCTGCTGGAGCTCCTCTCGGGGAGGAAGCCGGTGGACATGACGCAGCCGCCGGGGTCGGAGAACCTCGTCACCTGGGCGCGCCCCCTCCTCACCGACCGGGACGGCCTCCAGCAGCTGGTCGACCCGTCGATGCCGGCGGCGAGCTACGGCTTCGAGAAGCTGGCCAAGGCGGCGGCCATCGCGTCCATGTGCGTGCACGTCGAGGCGTCGCACCGGCCGTTCATGGGCGAGGTCGTGCAGGCCCTGAAGCTCATCTACAACGGCAACAACGACGACACCTGCACCAGCGGCTCGTTCGGCGGCGGCGGCGGCGAGGAGTACGAGGACGAGGAGGCGTCGTCGCCGTGGAACAACCGCTCGTGGAGCCACGACTTCGCCGCGACGCCGCCGCCGGCGTCGCGCAGGCTGGCGTTCCCGCGGGCTCCGGCCCGCCCGACGACGATGGACTACAGCTCGGACCCGGCCGACGGGGCGGCGGGGACGTCGTCGGCGTCGGCGCGGCGGCAGCGGTCGACGTCGAGCCTGGTGCTGGACAAGATCGAGTCGCTGGCGGCGTACGACTGGTCCGGCCCGCTGAGGGCCAGCAGGGGGAGGAACTTCTACAGGCTGAGGGGAAGCATGAGCGAGCATGGCGGCCATCCTTCCGAAGATTGCTCCATGGAGGGCTACTGGATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016744