BGIOSGA016754

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Revision as of 04:34, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016754| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016754, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA016754

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016754, complete gene.

LocusTag

OSJNBB0070J16.12

Ensembl Transcript ID

BGIOSGA016754-TA

Ensembl Protein ID

BGIOSGA016754-PA

Length

3902

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24446852..24450753

Sequence Coding Region

24446852..24447188,24450035..24450753

Genome Context

<gbrowseImage1> name=IndicaChromosome04:24446852..24450753 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:24446852..24450753 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGTTCAACTTGACTCTGTTGGTAGGGAGCAGGCGCTGGTTTGTGAAGAACTGCTTCAGCCACGGCCAGGTGACCGTGTCATACGCCGGCGTCCCGATGGGCGAAGGGCGCGTCCGCGGCGGCGGCTTCTGCGCAGAGCCGAGGAGCGAGGAGGAGGCGGAGGTGAGCGCGGTGGCGCGCGGGCGGCAAGGCGGGCACCGTGCCGCTGCCCGACAACCTGAGGAGGCGCATGGAGGCCGAGCTGCGGTGGGGGGCCGCGGAGTTCGACGTCGAAGCCAGGCTGTTCCGCAACGGCGGCGACACGCGCGGCTCCGTCATGCTCTTGTGCAAGGTGCGCTGTTTTCCTCACGCCGCGTTGTAGGCGACGGCCGAATCTCACAGCCTGCACCTAATCAACGTGCGCCACGCCGACTGATCGGCGACCATGGAAGAAAACCTCTTACCCTGCACGAGGGACGACGAGAAGCTTTTGCCACGCCGCCAAAATCCTATGGCCGGTTGCTTGGTCGCCGGCGCCGTCACCGCGATCTTCCTCGTCCTGCCCGTGGTGTTGATCATCCAGCAGTTACTCTTCGCGGACTTCACCCCTCCTCCGAGACCGGAGACATCCGTCGTCGTGGATTCTCCGGCCTCGACGGCGCCGCCGCCCGCGTCCCTAGGGCGTTCAACCTCTCGCTGAGCGTCGACAACCCCCGCGGCAGCACGTTCGACGTGTGCGTGGGCGGCGAAGCGGCCGTCCTCTACGACGGCGTCCCGCTCGCCACCGGCCTCGCGGAGGGTCGCTGCGTGCCGCCCGGCGGCGCTTGGCGCGGGGCCATACACGCGGCGAGCGGGGGCGTCGGTCTCCCTCCGGAGCTGGCCGCGCTCATGGCTACCGAGAAGCGCGACGAGGGCGACGTGAAATTGGAGGTTCGCCTCATCTCTCTCAACTACGGCTGGTACGTGAGGTGCACCCCGAGCCTTGTCGGCGGTGCAGCCTCGCCAATCCCTTGCACTGGACACATACTCAAGGACCAATCTGACGGTATCAGGAGAGTGATCAGGGATTGA</cdnaseq>

Protein Sequence

<aaseq>MAAFNLTLLVGSRRWFVKNCFSHGQVTVSYAGVPMGEGRVRGGGFCAEPRSEEEAEVSAVARGRQGGHRAAARQPEEAHGGRAAVGGRGVRRRSQAVPQRRRHARLRHALVQGALFSSRRVVGDGRISQPAPNQRAPRRLIGDHGRKPLTLHEGRREAFATPPKSYGRLLGRRRRHRDLPRPARGVDHPAVTLRGLHPSSETGDIRRRGFSGLDGAAARVPRAFNLSLSVDNPRGSTFDVCVGGEAAVLYDGVPLATGLAEGRCVPPGGAWRGAIHAASGGVGLPPELAALMATEKRDEGDVKLEVRLISLNYGWYVRCTPSLVGGAASPIPCTGHILKDQSDGIRRVIRD</aaseq>

Gene Sequence

<dnaseqindica>1..337#3184..3902#ATGGCGGCGTTCAACTTGACTCTGTTGGTAGGGAGCAGGCGCTGGTTTGTGAAGAACTGCTTCAGCCACGGCCAGGTGACCGTGTCATACGCCGGCGTCCCGATGGGCGAAGGGCGCGTCCGCGGCGGCGGCTTCTGCGCAGAGCCGAGGAGCGAGGAGGAGGCGGAGGTGAGCGCGGTGGCGCGCGGGCGGCAAGGCGGGCACCGTGCCGCTGCCCGACAACCTGAGGAGGCGCATGGAGGCCGAGCTGCGGTGGGGGGCCGCGGAGTTCGACGTCGAAGCCAGGCTGTTCCGCAACGGCGGCGACACGCGCGGCTCCGTCATGCTCTTGTGCAAGGTTGGATTGTTGCACGCGCCGCCGCGGTCTTCGCAATGTCAGGCCTTCACTAATTTCGTTTTCGAGGTATAGAAACAATAAATTTCACAAAACCTCCAGAGTAAGGGCACCAGTAATGTAAAACCCATAGATTATGATTTGTCTAGTAAAACCTAAGTTGTGGGAAGCAAAACCCCGGTTTAATTTAAGCTCTTCTATCATTTACTAGATGATATGCCCATGCGTTGCAACGGGTAAAAACATTTTTAAATCGCATATGGCCAAAGCTCTTTTTTTTTTCATTCATTTTCAGTCCAAGCCTATGCCCGCTATCTCTCTCTGCTCGGCCTGCCTCTATTTGACCTAGTCCACAATGAAGTTGTAGTCCTAGCTTACATAGCCATCTGTCGTCTTCAACAACGGGTAAAAATATTTTTGGATCGCTATACATTATACTCTTTGGTTTTGGGCTAAAATCTTATTCCTTCTTTCCTTTTCAATCCCACAACCCGTTATCTCTCTCTGCTTGGTCTGCCTCTCTTTTACCTAGCTCACGAGTGGAGCTGTAGGCCTAGCCGAGAATGTCGTCTTCAAACTCTGGAAGAGCGTCCGTATCATGCTAGAACTTATCCTCCCCATCAAATCGGATTGATCTCTCAAAATTGGTCGAGGGCTTTTGATACACTCGATCTACTCTTTTCGTTTTTATCAAAATATGAGTAAATCCATAAAACTTAGGATAAAAACGGTGACTTTGGAGATTAGATCCGCTAAATTAAAACGGAATTAAAAGGAAAAATACGGAAAAAAAGAGACGGACGAAAAAATACCGGAAACCTTACGTATTTTTTAATTAGATATAGATTTGGCTAATGAATTTATGCACAACAAGAAGTAATAATTGTAATAAAATGATATGATATAGTTTTAGGTGAACATTTACCATGTTTATATCAACTTTTGTTATTGGTATTATGAATTTCGTGCGTGTATATAGTCGACTATTGTATTACTATTAGTGGAGATTACATCGAATTATTAAGGGCCTGTTTAGATTGTAGCCAAAATTTTGGCAAGATTTCTTATGTATTTACTAAATTTGGCAACAAACTAAACGTAGACATTTTTTTTACAACTTTGCTAAAAAATAGTATGCTTGAAAATGGTATCAAAGTGAACATGCCCTAAGAATTGTGCAGCGCGAAGCTGACAAATAGCTAGTATAGATGGAAGGGATATAGTTTTAGAGCCTAATCTATACTCCTTTAAAAGAAGGCAATGACCATCAACTCTCTTGTAATTTTTGGAGACCCTGTTCGGTCGCTCACTTGGTGTGCCCTTATGGACGGACCTGGCTCCAGGGGTCTTCAAGGTTGGTGAAGACGATGCTAAAGGAGAGTTTCTGAAGCTAACGATTGTGATAGCAAGGTGAGGCTGAGCTCTAGTGGAGAGGTAACGGTGAATGGAGAAGCTTCGAGCAGTGGAGAGAGGAAGAAGGTGAGGGGTGTAGGCCAGGCAATTGTCTTCAATGGGCTCAATCACAACTCCTTGGAGGCGTGTGAGGAGGCCAAGATTTTGGTGGCAGAGATCGAAGGGCTATGTGTACCTGAGCTGGCAGCATCGTCCATGGTCCACCCTAGCTTTGCACCGATATGCTTCATCCTTAACTTCATGGCCACAATCATCGCCAACGAATCCGGGCGTGCTCCGCCGCATCCACCCTTTCTTCTCTTTCTCCAAAGCCATAAATTGTTGTCGTACTTCGCCACTCATAAAGTAGAGCTTGTCACCACCCACTGCGCTAACTGCCACTATTGCTGACCTTTAGAGATCGAACCATGCCACAACCTTCGCCGGAGACCGCGCCAACAACCTATGAGCTTTAAGCCGCCACTTCTCCCTCTCGGTTTATGTAAGTCATCACCGAGCATCACCCATGTTCCACGCAATGGCCCCACCAAGATGCTAATCAGTGTGCCTTTGCATCATTTGGCTGCGCCGTTGTCCGTCGTCACCACTGCTCACCATCAGAGCCAATCAACCAATCTTACTCTCCGATCTCCGTGTTTGTTTGGAAACATAATAGAGAGGGAAAAAAAGGACGATGAAAATATTGAACAATATGTGGGGGCAATGTATTTTTTTTATTGTAATGATATGTAAACATCACGTAGATGTTACGTCGTATGAAGACCTATCTACGTGCCACATAGGCGCTGTATAGGATGGAACCACCGTCGAAGCCACTCGAAAAAGCAAAGCGAACCAATTTTGATAGGGGAGAAAATCCTCCCATCTGATTTTGCTTCTAAGAGACGAAAATTGGGGATATATATACTTGAGGAAGGCGAAAATGAACTTTTTCTTAAATACTACTCCCTCCGTTTCACAATGTAAGTCAATCTAGCATATATATCTAAATACATCAATATGAATGTGAGAAATGCTAGAATGACTTACATTGTGAAACGGAGGAAGTAGTGTTCTTGCATGTACGTTACAACCGGATTAGAATTATAGGGTTTAGTTTTTTTTTCTCCTACGTACCTGCTCTTTTTTGGTTGATTTTTGCATGGAGATACCAAGTTTTGGGTAGGGTGATTTTTTTAGACGTTTTTTATGTGAGGGGACTACGATGGTGAAAAAGGAAGAGGCCACGATTCCGCTTTTTGAAGGCAGTAAAGATTATAGCGTGCACTACTTGGACTGCTAGCTCAGGGTGACGTTCGACCCATGATAATCGTTGGGCCTCTATCAAGATCGACTTCCTGTGGCAGATGGCTCAAATGGCCATATAGTGATTAAGACCAATTTAAAGATCGAATCGACTCAAACAGATCTCCGATTCAAACTCTTACTTTTATTAGGTGCGCTGTTTTCCTCACGCCGCGTTGTAGGCGACGGCCGAATCTCACAGCCTGCACCTAATCAACGTGCGCCACGCCGACTGATCGGCGACCATGGAAGAAAACCTCTTACCCTGCACGAGGGACGACGAGAAGCTTTTGCCACGCCGCCAAAATCCTATGGCCGGTTGCTTGGTCGCCGGCGCCGTCACCGCGATCTTCCTCGTCCTGCCCGTGGTGTTGATCATCCAGCAGTTACTCTTCGCGGACTTCACCCCTCCTCCGAGACCGGAGACATCCGTCGTCGTGGATTCTCCGGCCTCGACGGCGCCGCCGCCCGCGTCCCTAGGGCGTTCAACCTCTCGCTGAGCGTCGACAACCCCCGCGGCAGCACGTTCGACGTGTGCGTGGGCGGCGAAGCGGCCGTCCTCTACGACGGCGTCCCGCTCGCCACCGGCCTCGCGGAGGGTCGCTGCGTGCCGCCCGGCGGCGCTTGGCGCGGGGCCATACACGCGGCGAGCGGGGGCGTCGGTCTCCCTCCGGAGCTGGCCGCGCTCATGGCTACCGAGAAGCGCGACGAGGGCGACGTGAAATTGGAGGTTCGCCTCATCTCTCTCAACTACGGCTGGTACGTGAGGTGCACCCCGAGCCTTGTCGGCGGTGCAGCCTCGCCAATCCCTTGCACTGGACACATACTCAAGGACCAATCTGACGGTATCAGGAGAGTGATCAGGGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016754