BGIOSGA016797

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Revision as of 04:35, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016797| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016797, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016797

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016797, complete gene.

LocusTag

OSJNBA0038O10.22

Ensembl Transcript ID

BGIOSGA016797-TA

Ensembl Protein ID

BGIOSGA016797-PA

Length

3723

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25095808..25099530

Sequence Coding Region

25095808..25096272,25096987..25097085,25097490..25097667,25098593..25098690,25099254..25099315
,25099416..25099530

Genome Context

<gbrowseImage1> name=IndicaChromosome04:25095808..25099530 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:25095808..25099530 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCGCCACCTCCTTCTTCCAGCCGCTCACGACCCCCATCGCCGGCGCCGGCGCCGGCGGTGCCGCCCGGCTCCGTCGCGGGACCCTCGCACTGCCCTTCCCCACCCGCACGAGGCCTCTCCGGCGGCCGACGCCCCTCCTCGTCGCGCGGGCCAAGCGCCCCGGCAGCCGGACCGCGGCGGCCTCGAGGCAGCCCGCGAACCCCAGCGACGTGCCGAAGCGGGAGGCGGACGAGGAGGTGGAGGTGGAGGAGGAGATGCCCTGGATCCAGGACAAGGCGCTGGACCTCGTGGAGTTCACCGGCACCGTCACGCAGGCCATACCGGGGCCCCGCGTCGGCTCCAGCCCCGTGCCGTGGCTCCTCGCCGTGCCGCTTGCCTACGTAGGCGTGTCGTTTGTGCTCGCCGTCGTCCGCACCGTCCGCAGGTTCACCTCCCCGCGCACCCAGAAGAAGCGAAGGGTGAGCAAGAATATTTTTTTGCTGAAGTCACTAGATGAGTTGTTTCAGAAGGGCAGGGAGGCAGTGGATTTTCCAGCTCTCCAAGAACTAATGGAGAAGACAGGATTTGACATGGATGATGTAGTAAGGAAGTACATTCGATACACACTGAATGAAAAACCATTCAACCCTGATGTAGTCGTGGATCTCATACATCTTAGGAAAGCGTCAATGTTAGAAGATGCTGAAGTTGCTGAAATTTTGAATGAGATTTCAAGACGAATTGTTCGGGAAAAAGGACCAGTAGTCATGGACTTAGCTGGGTTTACAGAACAAGGTTTTAAGCGTAAGCTTGCTGTGCAAACGTTGTTCGGAAAAATCCTGTACTTATCAGAGCTCCCAGAGTTCTGCTCACGCGATGGCTCACTCGTTGTCAAAGAAATTTTCGGAGTTACAGATGAGGATGCAGACAGCATTAGGATTCACATACTTTCTGAAACCAGTGATATTGAGTCATTAGAGAAGATGGTCGATGATTCTGAACTGGGGCATGGCCCCTCGCCTTTATCATGA</cdnaseq>

Protein Sequence

<aaseq>MATATSFFQPLTTPIAGAGAGGAARLRRGTLALPFPTRTRPLRRPTPLLVARAKRPGSRTAAASRQPANPSDVPKREADEEVEVEEEMPWIQDKALDLVEFTGTVTQAIPGPRVGSSPVPWLLAVPLAYVGVSFVLAVVRTVRRFTSPRTQKKRRVSKNIFLLKSLDELFQKGREAVDFPALQELMEKTGFDMDDVVRKYIRYTLNEKPFNPDVVVDLIHLRKASMLEDAEVAEILNEISRRIVREKGPVVMDLAGFTEQGFKRKLAVQTLFGKILYLSELPEFCSRDGSLVVKEIFGVTDEDADSIRIHILSETSDIESLEKMVDDSELGHGPSPLS</aaseq>

Gene Sequence

<dnaseqindica>1..465#1180..1278#1683..1860#2786..2883#3447..3508#3609..3723#ATGGCGACCGCCACCTCCTTCTTCCAGCCGCTCACGACCCCCATCGCCGGCGCCGGCGCCGGCGGTGCCGCCCGGCTCCGTCGCGGGACCCTCGCACTGCCCTTCCCCACCCGCACGAGGCCTCTCCGGCGGCCGACGCCCCTCCTCGTCGCGCGGGCCAAGCGCCCCGGCAGCCGGACCGCGGCGGCCTCGAGGCAGCCCGCGAACCCCAGCGACGTGCCGAAGCGGGAGGCGGACGAGGAGGTGGAGGTGGAGGAGGAGATGCCCTGGATCCAGGACAAGGCGCTGGACCTCGTGGAGTTCACCGGCACCGTCACGCAGGCCATACCGGGGCCCCGCGTCGGCTCCAGCCCCGTGCCGTGGCTCCTCGCCGTGCCGCTTGCCTACGTAGGCGTGTCGTTTGTGCTCGCCGTCGTCCGCACCGTCCGCAGGTTCACCTCCCCGCGCACCCAGAAGAAGCGAAGGGTAAGTTTTCCGTGTCAAAATCGTTTGTAGTTTGATACCCAGTGAAGAGCCATCGTTTATAGTTTGGTGCTCATTGGGAAGCTGGGGAAGTGACGTGATTCGGAATGTAATTGCACTTATATCATCAGGTAGCTGCTCTATAAGATCGAAATTATTCTATTCTGTTACGTTTTCTAGCTGGCCGTTCTCTTGAGAGTTGAGATCGACTTTTAACCTCTTGGAAATTTAGGTACATCATGGGGAAAAGTAGTTTCTTAGGATTGATCTAGCATTTAATTTACCTATGTCAGTGACTATAGGCGATGGGAACAGCAGGGGATTCTATATTTGGAAGTTTATATCTAGGCATAAAGTAGTGTATACCCCACTAAAAATTTCAGTTTGATTGAGTTTGTTAAGTATATGGTATTTCCTTTAATGTTGCAGTCTAGTATTTCTAGTGAGTAGAGAGGATCAACTATATTCACTTTATGCATTCATGATGTTTCAAGCTAGATTATAACTTAGCATACTCAGAAGGGCAATGAACTTGCAATGATTTTCTTTCAACCATGACTTAATTTCACTCCTCCATGCCTTTACGCAGATGCAAAGAACTGTCTTCTGAGTTTGCTTCCTCTTTTTTACTGCAATATTGAACTTGACTTTATTTATAGAATAATTATGGTGCTATACCTTCTTGGTATTTAATGGTAAAGCAGTGTTCCTTTGCAGGTGAGCAAGAATATTTTTTTGCTGAAGTCACTAGATGAGTTGTTTCAGAAGGGCAGGGAGGCAGTGGATTTTCCAGCTCTCCAAGAACTAATGGAGAAGGTGTGCCCTTGATTCAACCTTTATATTAGACTAGTTCTATGATATGCTTGCTTTATTGTCTATTTATGGATGATGAGTGTACTTTAGCCGGCATTAGTTAATGGATATCTTGTGATAACAGGAAATCTTGTTATGACAATCAACTGCTGATGGTGATATTGGTATCCTGTGGTATACATCTTTAGATTGCTAGCCACATTGTGATTATGATCTAAATTAGAAAATTTGCTGCACAAAGTAGAATGATGATTTTGGACATAGTAATTTGTTAATTCTTTGCACCAATACATCCATTGTTGATATGATGATATCTACTTCTGTTTCAGGAATGATTTGATGCCTTTGTATTTAGTGGCAAAGCTACCAACCACATGATTTAACTGTTGTTTTTGGCATGTATTCAGACAGGATTTGACATGGATGATGTAGTAAGGAAGTACATTCGATACACACTGAATGAAAAACCATTCAACCCTGATGTAGTCGTGGATCTCATACATCTTAGGAAAGCGTCAATGTTAGAAGATGCTGAAGTTGCTGAAATTTTGAATGAGATTTCAAGACGAATTGTTCGGGAAAAAGGTATTGCTCATTCTTTGGGTCTGATTCTACTATTCTAGTGGTAATAGTGGATACATGTATTTCCTAAATTCAACTCTGGCTTGTGTACTTTTGTAACTCAATGCTATTCCTCTGGTAATTGATAGTTGTGTGTCCCACAATTTCCTATCGAGTTGTTTTTATATGCTACCCCATGGGAACTGCACTTTAAAGAACAAATCAAGGTAGAAGAAGAAGCAATTACCATGCTTAAAGATTTGTGCAACACTTATTGAAGGATGACATCCCCTGCTTATATACTAAGCATGCCTTTCGGTTGTATCTCCCATCGTTCTCAATTACACATGCTCTGCTAGCCTTCAGATATGTCCATGACAAACAATTAGTAGTGGGGATTTTCTGTTATGTTGTTTCGTGCAATAGTACAATGTCCAAGCGTGAAAAACATGTCTGTATCATAATGTAAAATCTTTGACTTACTGTTGTCATGTTTTCCCAAGAAGCATTTTAACATACATGTATGTGGGGTAGCAATCCGCATCCAGTAATAAAATTTCTGCAATTCCTTGTTATTTTGTTTATGCCAGGTGCAAACTAATTAACTGTTTTTCAAAAGTACTGAAAAAGATTCTATGAAATCAACGCAGCATTTTGTACTTGTAAGCCATACCATTATGCTTGTACATTTTTATGCTTTATTTGGTGAATTTTTAAATATGTCAGTTGAAATCTATGATCTTACTGCTTGAAGGCAAAATTTCTTCATACAATAGATGCATGAGCCATATAGTATGAATATACGTAAGGAGAGTATCCTTGATTCCTTATGATTTATTTATCTCCTGTCACCTATCAGTACTTGGTAATCATGAGGTTATGCTTCTGGTTTGCGAGAACAAGTCTGTGAGAAGTACTCAAGAGATTTTGCATCTTTATGATCTTGCAGGACCAGTAGTCATGGACTTAGCTGGGTTTACAGAACAAGGTTTTAAGCGTAAGCTTGCTGTGCAAACGTTGTTCGGAAAAATCCTGTACTTATCAGAGGTAAGCTGTTGATAGTTTATTTCTCTTGACCAAAAGGTCCAGTTCTGTTGATGATAAGCCAGATTTTGCTTGACCTCTGTACTGAAATGAAAAGGCTTGATAGGGCACTTATTGCTCTGCTTGCAGCTCATGATAATCTTTCATTTTTCAAAAACATTATCTGTCTTTGTTCAGTTAGAATTTAGAAGTTGTTACTTGTATTATCATGGTGATACTTGTATGTTTGTTTTTTTGCCTATGGATTCAGTGGAGTGAATTCGATACAGTATTTTCAAAAGTTATATAAACAACTAGATTCAAAGACAACAGAATCTGTTTAGGTAATATTATTGTTATGATTTAAATTCCTTTGGAGAATAATAAAATTTGGGGTATAAAACTTATTCCATTATTGTTTTGATGCACCGTGCTTTGTCAACACCCAGAGAGAAAAATGGATTAAAAAGTCTTGTCTAGGTCCTGTAATAAGATCTTTCATAGTTTTTCAAACTGGTCCAGTGTCTGATTTTCTGTATTTTCCCTTGCTATATATAACTTATGACTGTTTTTTTGTGAATATCCAGCTCCCAGAGTTCTGCTCACGCGATGGCTCACTCGTTGTCAAAGAAATTTTCGGAGTTACAGAGTATGACTAATTTTACTTTGTGGTGGATCTTTCTTTTACTGCAACTGCTGTTAATGCTACTGTCATGACCTATGCTTTTCCTCTTTTTTCATGTGAGCAGTGAGGATGCAGACAGCATTAGGATTCACATACTTTCTGAAACCAGTGATATTGAGTCATTAGAGAAGATGGTCGATGATTCTGAACTGGGGCATGGCCCCTCGCCTTTATCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016797