BGIOSGA016801

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Revision as of 04:35, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016801| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016801, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA016801

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016801, complete gene.

LocusTag

OSIGBA0115K01-H0319F09.18

Ensembl Transcript ID

BGIOSGA016801-TA

Ensembl Protein ID

BGIOSGA016801-PA

Length

5150

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25116141..25121290

Sequence Coding Region

25116141..25116518,25118202..25118491,25118589..25118760,25118875..25118997,25119103..25119231
,25119389..25119583,25119732..25119818,25119900..25120172,25120770..25120877
,25120967..25121290

Genome Context

<gbrowseImage1> name=IndicaChromosome04:25116141..25121290 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:25116141..25121290 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGAGCTGCAGGCGAACGCGTCGTCGGCGGGCGGCGGGATGGTGGTGGGGCTGAGCCCGCTGAGCGAGACGCTGTGGCGGGACAGCAAGGCGATGCCCGGGGCGGCGGCGGCGCTCATCGGCGACGTGTCGGCGAGGCTGACGTGGAAGGACCTCTCGGTCACCGTGGCGCTCGGCCCCGGCAAGACGCAGACCGTGCTCGACGAGCTCACCGGCTACGCCGAGCCGGGCTCGCTCACCGCCCTCATGGGGCCCTCCGGCTCCGGCAAGTCCACCCTCCTCGACGCCCTCGCCGGCCGCCTCGCCGCCAACGCCTTCCTCTCCGGCAACGTCCTCCTCAACGGCCGCAAGGCCAAGCTCTCCTTCGGCGCCGCGGCGTACGTGACGCAGGACGACAACTTGATCGGGACGCTGACGGTGCGGGAGACGATCGGGTACTCGGCGATGCTGCGGCTGCCGGACAAGATGCCCCGGGAGGACAAGCGCGCCCTGGTGGAGGGCACCATCGTGGAGATGGGCCTCCAGGACTGCGCCGACACCGTCATCGGCAACTGGCACCTCCGCGGCGTCAGCGGCGGCGAGAAGCGCCGCGTCAGCATCGCCCTCGAGCTCCTCATGCGCCCCCGCCTCCTCTTCCTCGACGAGCCCACCAGCGGCCTCGACAGCTCGTCGGCGTTCTTCGTGACGCAGACGCTCCGGGGGCTGGCCAGGGACGGGAGGACGGTGATCGCCTCCATCCACCAGCCCAGCAGCGAGGTGTTCGAGCTCTTCGACATGCTCTTCCTCCTCTCCAGCGGCAAAACCGTCTACTTCGGCCAAGCATCGCAGGCATGCGAGTTCTTCGCCCAGACCGGCTTCCCGTGCCCGCCACTGAGAAATCCATCGGATCATTTCCTGAGATGCGTCAACTCCGACTTCGACAAGGTGAAGGCCACCCTGAAAGGTTCCATGAAGGCAAGGATCGAGAGGTCGGACGATCCTCTGGACAGGATGACCACATCTGAAGCCATCAGAAAGTTGGTTGCATCCTACAGCAGGTCCCAGTACTACTACGCTGCAAGGGAGAGAGTTAATGACATCTCACGACTGAAAGGAACTGTGCTGGATTCAGGAGGAAGCCAGGCTAGCTTCTTGATGCAGGCAGGCACACTGACCAAGCGCTCCTTCATCAACATGTCAAGGGACTTCGGGTATTACTGGCTGAGGCTCCTCATCTATCTCCTCGTGACCGTCTGCATTGGCACCATCTACTATGACGTCGGCACCAAGTACACATCCATCCTGGCTAGGGCTGCCTGTACCGCATTCGTCTTCGGATTCGTCACTTTCATGTCAATTGGAGGGTTCCCTTCATTTGTTGAAGAAATGAAGGTTTTCCAAAGGGAGCGGCTGAATGGGCATTACGGTGTCGCGGCTTTTGTCATCAGCAACACAATCTCGGCGCTGCCATTCTTGGTCCTGATATGCTTCTTGTCAGGGACCATATGCTACTTCATGGTGCGCCTTCACCCAGGTTTCTCCCACTACATCTTCTTCGTTCTCAACCTCTACGCCAGCGTCACTGTGGTTGAGAGCTTGATGATGGCCATTGCAAGTGTCATCCCTAATTTCCTCATGGGGATCATTATAGGAGCTGGGATTCAGGGAATATTTATGCTTGTCTCTGGATACTTTAGACTTCCTTACGACATTCCGAAGCCTGTTTGGAGATACCCCATGCAGTACATCAGCTTCCATTACTGGGCGCTGCAGGGGCAATGCCAGAATGACATGGATGGTCTCGTATTTGACAACCAGTACCCAGACCAACCGAAGATCCCTGGAGACTTCATTCTGAAGTACATATTCCAGATCAACGTGCACCGGTCAAAGTGGATTGATCTCTCAGTAATTTTCAGCATGATCTTCATCTACCGCATTCTGTTCTTCCTCATGATCAAGGTAAATGAGGATGCACTGCCATGGATTCGGGGGTACATTGCAAGGAAAAGGCTTCAAAAGAAGGAACCTCTTGGCAAGACACCCTCCCTCAGAGGCTACGTTGTGGATCCAGAGCTTGGTCCTAACGAAAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MVELQANASSAGGGMVVGLSPLSETLWRDSKAMPGAAAALIGDVSARLTWKDLSVTVALGPGKTQTVLDELTGYAEPGSLTALMGPSGSGKSTLLDALAGRLAANAFLSGNVLLNGRKAKLSFGAAAYVTQDDNLIGTLTVRETIGYSAMLRLPDKMPREDKRALVEGTIVEMGLQDCADTVIGNWHLRGVSGGEKRRVSIALELLMRPRLLFLDEPTSGLDSSSAFFVTQTLRGLARDGRTVIASIHQPSSEVFELFDMLFLLSSGKTVYFGQASQACEFFAQTGFPCPPLRNPSDHFLRCVNSDFDKVKATLKGSMKARIERSDDPLDRMTTSEAIRKLVASYSRSQYYYAARERVNDISRLKGTVLDSGGSQASFLMQAGTLTKRSFINMSRDFGYYWLRLLIYLLVTVCIGTIYYDVGTKYTSILARAACTAFVFGFVTFMSIGGFPSFVEEMKVFQRERLNGHYGVAAFVISNTISALPFLVLICFLSGTICYFMVRLHPGFSHYIFFVLNLYASVTVVESLMMAIASVIPNFLMGIIIGAGIQGIFMLVSGYFRLPYDIPKPVWRYPMQYISFHYWALQGQCQNDMDGLVFDNQYPDQPKIPGDFILKYIFQINVHRSKWIDLSVIFSMIFIYRILFFLMIKVNEDALPWIRGYIARKRLQKKEPLGKTPSLRGYVVDPELGPNES</aaseq>

Gene Sequence

<dnaseqindica>1..378#2062..2351#2449..2620#2735..2857#2963..3091#3249..3443#3592..3678#3760..4032#4630..4737#4827..5150#ATGGTGGAGCTGCAGGCGAACGCGTCGTCGGCGGGCGGCGGGATGGTGGTGGGGCTGAGCCCGCTGAGCGAGACGCTGTGGCGGGACAGCAAGGCGATGCCCGGGGCGGCGGCGGCGCTCATCGGCGACGTGTCGGCGAGGCTGACGTGGAAGGACCTCTCGGTCACCGTGGCGCTCGGCCCCGGCAAGACGCAGACCGTGCTCGACGAGCTCACCGGCTACGCCGAGCCGGGCTCGCTCACCGCCCTCATGGGGCCCTCCGGCTCCGGCAAGTCCACCCTCCTCGACGCCCTCGCCGGCCGCCTCGCCGCCAACGCCTTCCTCTCCGGCAACGTCCTCCTCAACGGCCGCAAGGCCAAGCTCTCCTTCGGCGCCGCGGTACGCATACAAAAATCATATACTCATGTAGTACTCCATACCTAGCTTCTTGCTTCACTTGTTTTATCCAACAAAATCTCCATTTCTAGGAATCAAAATTGTCTCGTACCACAGCCCTTGCTATACTTTACTGTCTCCTTAGCTAGATAAGTTCAGTCATCATCCATAATAAGTATCCATCCCGTTTCAGCATTAATAGTCAAGCTAACTAACGAACTAGCTAGCCCTAGCCTGTGTTGATGGCGCCATGTGCATAAACACACAGTCACACTCCCATCAAGTGGCGTTTTACGAGTAGGCGACCACGGTCCGATCGACCGGCTAATTATCGTCGCCATCAAAACATACTGGACAAACGCAACGCGTACCTACGTCCGCTCGTTGATCCAGCGGGTTGCAGGGCTTAATTACTTTTGTCATCTGCCATGTCCCCGATGGCGAAAGGCTGTAAATATAACCCCCCAACGAAGCATAAGTGCACATAACGTGTACTGCTGCTTGTTAGGTGCAGCAATCAATTCGATCTGTTTTCTCTCTTCGATCTCTGATTCCATTCATTTGGGGCGTAGTACGCGAGATTTTTTTTTCTCTTTTCTCTTTTTTTTATAAGAGATGGAGAACTAGTGGGAGTAGTTTCGAAAGACGAGATTTAGAGGTTGTGGTGCGGCGACCTACATAGCATAAATACAGACAGTTGGATATACTTGGATTTGTTCGTGATCGAACCTGTGGGGAATTTATGGTGACATGAACCATTCAGCTGCAGTGACCGCGTGGTTTGTCCTACCAACGATTATACTACAGGAGTAATGGAAGGAAGGAGGGGGACTTTTCTGCATACAAAAAAAATAGTATTACAAATCTGATGGTTTATCCTCATAGAGCGAGACAACTTGGGCCGTTTAATTTACTGGTCGTTTTCAAATTTCAATGCCTTAATAACTGACCAAACCTGTAGGCTCAAAGCTGTAACCAAGCTCGCCCAGCATGAAAAAAAAGTATCAGCTCATTTCTGAATCTACGTTTTTCTTTTCAGGCGGGTCTTTTAATTTACAGTGTACACACCATTATTACATGTACCAAAACTACGGCGCCGTTTTGTACCGTCACATTTACGTATTATATACTCATTTAAATGACTCTACTAGCGGTGCCATCTCATCACTGCTCTTTAAAGTTATTATTACAAATTGTCCTCAGATATTTTCTAATATATATACTCCAATATTTAGTTTCCAAAAAGTGAATACCAATAACCAAACAAGCAGGGCCGGCCCTGAGACAGTGCGGACGGTGCGACTGCACTGGGCCTCTAAAAATTAGGGGCCTCCAAAAAATGTATACTATGGTATCAGATCTGATAGGGTTAGAGGAAAGATAGAAAACCGATCGGCGATCGAGCATATCGTGACTTCTTGATTGTATTTTAAACTGATTAGTGTGAAATTCATTAATGACAATGAGTTTTTAAATATTATCTTGTATTTTTATGGTGAATGGGGGCCTTCATTTTTTTTCCGTACCGGGCCACTGAAAAGTCAGGGCCGGCCCTGCAAACAAGCGAGAACCTATTCGAAAAAAAATATTTATCTATGACATATGATAAGTGTATTTTCATTTATCTATAGCAAAGCAAGTGCATTTAGCGGTGAAACACGAGGTTTACGGAGGGTTTTTTTTTAGGCGTACGTGACGCAGGACGACAACTTGATCGGGACGCTGACGGTGCGGGAGACGATCGGGTACTCGGCGATGCTGCGGCTGCCGGACAAGATGCCCCGGGAGGACAAGCGCGCCCTGGTGGAGGGCACCATCGTGGAGATGGGCCTCCAGGACTGCGCCGACACCGTCATCGGCAACTGGCACCTCCGCGGCGTCAGCGGCGGCGAGAAGCGCCGCGTCAGCATCGCCCTCGAGCTCCTCATGCGCCCCCGCCTCCTCTTCCTCGACGAGCCCACCAGCGGCCTCGACAGGTACGCGTCCTCCCTGCATCCAGTCACAGCTGAGCTGACTGATGGTGTGCGCTGGACTGACCGCGGCGATGTGATGCCGGCTTGATCATGCGCGCAGCTCGTCGGCGTTCTTCGTGACGCAGACGCTCCGGGGGCTGGCCAGGGACGGGAGGACGGTGATCGCCTCCATCCACCAGCCCAGCAGCGAGGTGTTCGAGCTCTTCGACATGCTCTTCCTCCTCTCCAGCGGCAAAACCGTCTACTTCGGCCAAGCATCGCAGGCATGCGAGGTAAGTCATCTCACCAGTCACCAGATTCAGAAAGCAACCAGTATATATATATATCTGTCACCACTATCATTCGCCATGGTTTCTAACGTGACCATCTTGTGCTCGTGCTTGCAGTTCTTCGCCCAGACCGGCTTCCCGTGCCCGCCACTGAGAAATCCATCGGATCATTTCCTGAGATGCGTCAACTCCGACTTCGACAAGGTGAAGGCCACCCTGAAAGGTTCCATGAAGGCAAGGGTAAGAAGAGATCAAGACACACCAATGTTCATAGCTGATCTGCTCAAACTTGTTCGTGTCACGATGCACTTAAAATGATCTAATTTTTGGGCATTCTCATTGAAGATCGAGAGGTCGGACGATCCTCTGGACAGGATGACCACATCTGAAGCCATCAGAAAGTTGGTTGCATCCTACAGCAGGTCCCAGTACTACTACGCTGCAAGGGAGAGAGTTAATGACATCTCACGACTGGTACGTGTTCTTGGCGACCCTAATACAGCAGCGCGTATTGATATCACTCTTTTTCCTCTCTGTTTTTTTTTTCTTGCGCCCCCACGTATAGTTAAGACTGCATCCAGGACAGGCAATAACAGGATGAACACTAACACACCCATGTTATTCGTTGCAGAAAGGAACTGTGCTGGATTCAGGAGGAAGCCAGGCTAGCTTCTTGATGCAGGCAGGCACACTGACCAAGCGCTCCTTCATCAACATGTCAAGGGACTTCGGGTATTACTGGCTGAGGCTCCTCATCTATCTCCTCGTGACCGTCTGCATTGGCACCATCTACTATGACGTCGGCACCAAGTACACATCCATCCTGGTAAGAAATGAAGGAACTGATAAGCGATTCTTATGACTGGAATGCTGTAATAGAAGTTTATATTAAAAAAAACATAGTCAGATGAGTAATCTGTCATGAATCCATTAATTGGCTGGTTCTGATGTGTTTTGGTTTACACTCTGAACAGGCTAGGGCTGCCTGTACCGCATTCGTCTTCGGATTCGTCACTTTCATGTCAATTGGAGGGTTCCCTTCATTTGTTGAAGAAATGAAGGTGAATTCCAAGCAAACGGTTTCATCTGGATGCTAGAATTACCATGCCAAATTTGCTCAGTTTTCCCTTGTTCATTGACAGGTTTTCCAAAGGGAGCGGCTGAATGGGCATTACGGTGTCGCGGCTTTTGTCATCAGCAACACAATCTCGGCGCTGCCATTCTTGGTCCTGATATGCTTCTTGTCAGGGACCATATGCTACTTCATGGTGCGCCTTCACCCAGGTTTCTCCCACTACATCTTCTTCGTTCTCAACCTCTACGCCAGCGTCACTGTGGTTGAGAGCTTGATGATGGCCATTGCAAGTGTCATCCCTAATTTCCTCATGGGGATCATTATAGGAGCTGGGATTCAGGTACATCTTTATGCTTCTTTCATAAGCTTTCTTAACCTATATCTCTTGGTTTATTGTTGAAGTAATGGATGTTCATTTAGGTCTATCTTTAAAGTACTATCATGTTAACAATCATATTAATTAGGACCAAATGTATTAAATATAGTGCTATAGAAAGATTGGATCGAAACACCGAACTCGGTTGTTCCCGTCTGGTACAGTTCTTAAGTCTGTTTTTTTTTCCATGGCATTGTCCCAGAGGATCATGTGGCATTTAAGATATGTTCATGAATGAGAGCTTACAAAACTTTGAAAGGTTCTAATATAATCTGATATGAGTCAAATAAACCAGCAAGCTTGACAAAGAAATAAATGCTGGACAGCACAACTTTACCGTACGCTACCCAGCATTACTGTACACTACTCCCATCCCAGTTTAAAGACAGCTTGAGGTCGTTCAAGATCTTATTCCTATGTTTTGTTCTTCTAACTGCTGATCCTATCCTTTAGTGGCCGCATTACATTGCTGCCTTACAAAGGAAACGCTTTTTCTTTCAATTAAAATTTCAGAACTTCATAACTCAGTAAACATAACTCGTCTTACTTTTTTTTTCCTAGGGAATATTTATGCTTGTCTCTGGATACTTTAGACTTCCTTACGACATTCCGAAGCCTGTTTGGAGATACCCCATGCAGTACATCAGCTTCCATTACTGGGCGCTGCAGGTAAATTAAATCCCACTCTTTGACAGGGGAAACACACTAAATTTTTATCTTGAAGAAAATTTGACACCAAACTTTTATCAACCTGACAGGGGCAATGCCAGAATGACATGGATGGTCTCGTATTTGACAACCAGTACCCAGACCAACCGAAGATCCCTGGAGACTTCATTCTGAAGTACATATTCCAGATCAACGTGCACCGGTCAAAGTGGATTGATCTCTCAGTAATTTTCAGCATGATCTTCATCTACCGCATTCTGTTCTTCCTCATGATCAAGGTAAATGAGGATGCACTGCCATGGATTCGGGGGTACATTGCAAGGAAAAGGCTTCAAAAGAAGGAACCTCTTGGCAAGACACCCTCCCTCAGAGGCTACGTTGTGGATCCAGAGCTTGGTCCTAACGAAAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016801