BGIOSGA016821

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Revision as of 04:35, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016821| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016821, complete gene.| tag = OsI_167...")
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Gene Name

BGIOSGA016821

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016821, complete gene.

LocusTag

OsI_16765

Ensembl Transcript ID

BGIOSGA016821-TA

Ensembl Protein ID

BGIOSGA016821-PA

Length

5936

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25370983..25376918

Sequence Coding Region

25370983..25371030,25372061..25372257,25373020..25373080,25373892..25374126,25374252..25374490
,25374787..25375038,25375138..25375318,25376104..25376192,25376675..25376748
,25376840..25376918

Genome Context

<gbrowseImage1> name=IndicaChromosome04:25370983..25376918 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:25370983..25376918 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGTCGATGAAGGCAAACATTGAGAGGAGGAAGACGAGAGAGCATCAGCAGCACCAGCACCAGCACCAGCAGCCGCCGCACCCGCACCACCACCAGTACGTGCAGCGGCAGCCGCAGCCGCAGCAAACGCCGCACAACAGCCAGCATCAGCAGTGGCTTCGGCGGAACCAGATCGCCGCCGAGGCCGCGGGCGCCAGCGAGCAGAAGGCGCCGCCTGTCGCGGACGGCATAGATTCGAGTTCACAAGACTGGAAGGCCCAACTGAAGCTCCCACCGCAAGATACACGCTACAGGACAGAGGATGTTACTGCTACCAAGGGAAATGAATTTGAAGACTATTTTCTGAAGCGAGAACTCCTTATGGGGATATATGAGAAAGGATTTGAAAGACCTTCTCCTATACAAGAAGAAAGTATTCCTATTGCATTAACTGGCAGTGATATTCTTGCAAGAGCAAAAAATGGAACTGGCAAGACTGCTGCATTTTGTATACCCGCGCTGGAAAAGATTGATCAAGACAAAAATGCTATTCAAGTTGTTATATTGGTTCCCACAAGGGAATTGGCTCTACAAACATCACAAGTTTGCAAGGAGCTTGGGAAACATTTGAAGATTCAAGTGATGGTCACTACTGGAGGAACCAGCCTAAAGGATGATATTGTCCGTCTTTATCAACCTGTTCATTTACTTGTTGGAACTCCTGGTCGCATTTTAGACCTTACAAAGAAAGGTGTCTGCGTCCTGAAGAACTGTTCAATGCTTGTTATGGATGAGGCAGACAAGCTTCTTTCTCCTGAGTTCCAACCGTCTATTCAGGAATTGATTCGGTATCTTCCATCGAATCGGCAAATTTTGATGTTCTCTGCAACATTCCCTGTGACTGTCAAGGAGTTCAAGGACAAATATCTCCCTAAACCCTATGTCATTAACCTTATGGATGAACTTACATTGAAGGGAATTACACAGTTTTATGCTTTTGTTGAAGAGAGGCAGAAAGTCCACTGTCTTAATACTCTTTTTTCCAAGCTGCAAATTAATCAATCGATAATATTCTGTAACTCGGTAAATCGTGTTGAACTATTGGCAAAGAAGATCACAGAGCTTGGTTATTCTTGCTTCTATATCCATGCTAAAATGTTGCAAGACCATCGGAACAGGGTTTTCCATGATTTTCGCAATGGTGCATGCAGGAACTTGGTTTGTACAGATCTTTTTACAAGGGGAATAGATATCCAAGCTGTTAATGTTGTTATCAATTTTGATTTCCCCAAGAGCGCAGAAACATATCTCCATAGGGTTGGTAGATCTGGCAGATTCGGCCACCTTGGTTTGGCTGTGAATTTGATCACCTATGAGGACCGTTTTAACTTGTATCGCATTGAACAAGAGCTTGGAACCGAGATAAAACCAATACCACCTCAGATAGACCGAGCAATATATTGCCAATAG</cdnaseq>

Protein Sequence

<aaseq>MATSMKANIERRKTREHQQHQHQHQQPPHPHHHQYVQRQPQPQQTPHNSQHQQWLRRNQIAAEAAGASEQKAPPVADGIDSSSQDWKAQLKLPPQDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIVRLYQPVHLLVGTPGRILDLTKKGVCVLKNCSMLVMDEADKLLSPEFQPSIQELIRYLPSNRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKPIPPQIDRAIYCQ</aaseq>

Gene Sequence

<dnaseqindica>1..48#1079..1275#2038..2098#2910..3144#3270..3508#3805..4056#4156..4336#5122..5210#5693..5766#5858..5936#ATGGCGACGTCGATGAAGGCAAACATTGAGAGGAGGAAGACGAGAGAGGTAAGGGGACATGCTCCGTCACCGCTCTTCCCTGCCGGCCGCTGCCCACGCCGCACTCCTCTGGTCTCCCCCGGCTACAGCCCGTCTTCACTAGCAAACGAGCGCCGCCACCGCTCTTCTCCCATATCGGCCGCCAATCGCGTCGCGCGCCTCCCATTCTCCCTAGGCCGCCCGCCGCTCTTCTCCCCAGCCTGCTCTTGCCTCGCCGCCGCTCTTCTCCCCATGTTGGTGATGCCGTGGTGCCTCGCTGCTGCTATTCTCTCCCATGTCGGTGATGCCGTGCCGCCTCGCCGCCGCTCTTCTCCCCATGCTGGTCGACCGCATGGCCGTCGGCTCACCTTGGTCCGCGTCCGGGCTCGACGCCGACCCCATCCTCGTCGGTGCCGCACCAAGTCGCCGCCGCCATTGCCCGTCACCAGCCACCAGACGAGGAGCAAAGTGAGAGAGTGAGAAGAGGAAGGGAGAGAAGAGGGGAGAGAGGTTGATGACATGGTCACCCTGACATGTGGGGCTCATGTGGGTCCCACGCTGACTCAGCCGCCACGTCGGACAAAATCAAGGTCAGAATCATTAAAGGACCTAAAGTAAACAGTTTTGTATATTGAGGTATGTTATATATCTAGTTTTTCGGTAGGGGGCGATTTTGTAACTCGATGACAAGTTGAGGGACCTCGGTGTACTTCTCCTAATCTTTCAGCCCGCTTGAATTTGGGCCAAGACACGAGCAAAAGCCGAGGTAGGAGGCCCTAAACACAAGGAAGTAAAGGGCACTCCCGTAATTTCTCGCTCCACCCGTCCGACTCCGGCGTTGCCCTAGCCCGGCTTCGCTTCCGCGACGCTCCCCCAGGCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGGTACCCTCCCGGCATCGGCAACGGCCGGGGCGGGAACCCTAACTACTACGGCCGTGGCCCACCGCCATCGCAGCATCAGCAGCACCAGCACCAGCACCAGCAGCCGCCGCACCCGCACCACCACCAGTACGTGCAGCGGCAGCCGCAGCCGCAGCAAACGCCGCACAACAGCCAGCATCAGCAGTGGCTTCGGCGGAACCAGATCGCCGCCGAGGCCGCGGGCGCCAGCGAGCAGAAGGCGCCGCCTGTCGCGGACGGCATAGATTCGAGGTGAGGGAGACGCTTGGAAGGCTTCCCGTTTGGTATTGTTAGATTAAGGCTCGGTATTCACGCGATTGGTGGACTTATTTTTGGATTTTGTTCTGCTGTGAGGGGTGAAGCCTACACTTGTCGATCAATAGGTATCTAGGCGAAGTTGCAAAAAATTGAAGAAAAATTTGTGCTCCTTAGGCGATGCGCTGCGACCTGCGAGCGTATGTGTTTTTAGACGGACAAAAGTGGTGTTATATAGGGGAATTAGAGTGTAAAGGTCTACTTTTCTGGTCAGCATGCTTGGATCACACCTCCTCCGTCTGAGCGTGCTGTATTAATTCAAAATAATCAAAACGTCGTAGACTTTTGCAAAGTAATCCAGAAATTGGTTGGAGTGAACTAATGCTGTCAAGCAGTCAAGCAGACAGTTTCCTGATGACTGCTGAGCAACTTAGTCCGTACCGTGCATTGTGTACATTATGGATGACTAGCAAAATACCCGTAAGTTGCAGCGGGCTCTCATGAAGCAAATAGAGCTTCTCACTCTAGTACATTGTTAGACAACAATGATGAGCCCACAAGATAGATGGTGGCCCCCAGTTGTCAGATAGATGGGGGTGGCAGAACCACCACCACCACTAGCATCTTCTAAGATAGTATAGATATATGTAGCTGCTGGTGTTAAACTAGAAAAATACTATGGATACTTTAATTCCTCTTCATCCGTATATGATTAACATCATGAATAAAGTAAAAAGAAATAAGTTCAACCTTGTGCAGTTCACAAGACTGGAAGGCCCAACTGAAGCTCCCACCGCAAGATACACGCTACAGGACAGAGGTACTATAGAACAATATTTTCCTTTTGTCATATTAGTGCTGGGTGCTAATGATTGTAATGAGCTAGCAAATATGTTAACAAGTTGACATAATTGTCACCCTCGCATTCTATCAGTGTGGGTGTTTTGTGTTTCCTAATTTCCTACATGAGGTTTTGATGCGGTAAATAAATTAATAGAATCGCCATTTTAATTTTAGAAGCTTCCAGGCCTAGTTCTGATAATATATCTTTTCATGCTCATCTCTTGTACCTCATCTTAGTTACAAATAGCCAAATTTCAATATTTCACAGGACTATCTGAATGCTTTGATATGGGTAAAAGAAAATATATTGTAATATAAATATAACATATTTTCCATACAACGTGTTACCTGTCTTTCTACCATAGGGAATATTCACCTTAATTTGATTTTATATGTGGCTATCCATTTATATTTGACTTTTATTAAGAAGTTTACAGGGGCTAATTTGCAATATTTATAATGAGAGTAAGTGGGGAGGCAGATTCACTGCCACCACCACCACCTTCTTTTGAAGGAGTATAGATTACATATTCCATTCTGTTCCCAGAGAAAAATGCTATGCTGGTATTGCATTGAACAGATTATATGACTGTTGGTACACATTACACCATAGGTAGGTTATGTGTTGATTGTGCCAACATTAAGATATTCAGAATATTAAACTAGTTATTAAATGAACCCCTGGATAAGTTAAATGTTGTACTTAGTTTATGGTGTCCCTGTTGCGTTTGTTTGTTGCACATGTTCTCAATCTTCTGCTAAGCTAGTGTCATTGAAAAAATGTGTAGGATGTTACTGCTACCAAGGGAAATGAATTTGAAGACTATTTTCTGAAGCGAGAACTCCTTATGGGGATATATGAGAAAGGATTTGAAAGACCTTCTCCTATACAAGAAGAAAGTATTCCTATTGCATTAACTGGCAGTGATATTCTTGCAAGAGCAAAAAATGGAACTGGCAAGACTGCTGCATTTTGTATACCCGCGCTGGAAAAGATTGATCAAGACAAAAATGCTATTCAAGGTTTTTTTCTAGACTAGCACCTGTTTTGCCCTACATGGAGTTCCTAAATTGTGTGGTGATCAAAGGAAAACACTTTCATGATTTCATCATCTCTGATCCTTTATTGAATCTCTTCTTATATTCAGTTGTTATATTGGTTCCCACAAGGGAATTGGCTCTACAAACATCACAAGTTTGCAAGGAGCTTGGGAAACATTTGAAGATTCAAGTGATGGTCACTACTGGAGGAACCAGCCTAAAGGATGATATTGTCCGTCTTTATCAACCTGTTCATTTACTTGTTGGAACTCCTGGTCGCATTTTAGACCTTACAAAGAAAGGTGTCTGCGTCCTGAAGAACTGTTCAATGCTTGTTATGGATGAGGTATATCATTGTCTGTCTTGTTTTCATGTGTTGTTGCTCCTGTTCTTAAGTAAGATACTCTAATATCTTTTCTAAGTGGCATCTGAACATAAAACAATAGTTAAGCTTTTTTCTACTTCGATTATGTGTTTGTATAAAATTCGACACGAGCAACTTTGATGTTTGGACGAGAACATTAATAATGGGTATGCTACAAAAGGAGAACTTTAAAAAATATGTTTGAATTTGTAGTGTGTTGGTAGATTTGTAGACAAAAAGGCATGAGTGCTTGTGAGTAATATTGCCTTCTCTTGCAGGCAGACAAGCTTCTTTCTCCTGAGTTCCAACCGTCTATTCAGGAATTGATTCGGTATCTTCCATCGAATCGGCAAATTTTGATGTTCTCTGCAACATTCCCTGTGACTGTCAAGGAGTTCAAGGACAAATATCTCCCTAAACCCTATGTCATTAACCTTATGGATGAACTTACATTGAAGGGAATTACACAGTTTTATGCTTTTGTTGAAGAGAGGCAGAAAGTCCACTGTCTTAATACTCTTTTTTCCAAGGTTTTCCCAATAGCCCTTACTAACTGAGCTTTTAACCATGATTTCATTTTGATGTCATCATAATCTTTAGTTAATACATCCAATTTCGTTTCAATACAGCTGCAAATTAATCAATCGATAATATTCTGTAACTCGGTAAATCGTGTTGAACTATTGGCAAAGAAGATCACAGAGCTTGGTTATTCTTGCTTCTATATCCATGCTAAAATGTTGCAAGACCATCGGAACAGGGTTTTCCATGATTTTCGCAATGGTGCATGCAGGAACTTGGTTTGTACAGGTATATAGATTTCCTTCTAATAGTTAACTGTTCTTTTTTCCCTATTAAAGAACATTATTCCATATCTATCTTACTATCGGTTCCACACTGAGTCTTTAATATTCTGTATTCAAGGCTTTGTTTTTTTTTTAAAAAAATTACTATTAAGGATTTTAGGCTTTTGACACCTTGCTTAATTTCATCTTCCAAATCAAAGAAAGAAAAGCTCCAGGAAATGTATCTAAATACATTATCGCTTTACTAAATCTCTACTCATTTTACAAGAAAGTTAGAAATATATAAAATGCCCTATTTGATTCCTATTATATATAGTTTATGCCAAAAAGTTGATGAATTCAGTTAGTGTTTGCTTTTGAACATGTTTTAGATATGCAACCTGTATGCCCCTGTTGTTTGTTAAATACTTTAAGAATTACTTTACCAAGTATGAGGTATGTCCAAAAGTGTGAGAAAATCCAACATATAGATTCCCATTATAAGTTTAATTAGCCAATATTATCTCTCTTTGGCATTAGGGACATTTAAAGGTCAACCATGAGAGAGGTTGTTACAATGTTATGTTAGAGCTTGGCCACACTTTTGTAATTTGTTCCATGGCTATCTAATTTTGTGCTGATATTCCATTCATTGTAAAGTTATGCTTTTGGTGTTTTTCTTATCTTGCCTGCTAGAAATTAGCATGATAAAAATGCCTTGCTGCCAAGTGCCAACCAAAGCTCTTATTGTTATATTCAGCAAACTGGAGGCATCATTTGGGTTCTAATATCTCATATTTCCCTTTGCAGATCTTTTTACAAGGGGAATAGATATCCAAGCTGTTAATGTTGTTATCAATTTTGATTTCCCCAAGAGCGCAGAAACATATCTCCATAGGGTATGCATTGAAAGAACTGAGATTTTTTTATAATTTCTGTTATAGTGGCCTGCCGAATATCTTCTCCTAAGATGGCTTTTTTTATGACATGGACATTTAAGATTGAATGCTTATCCTTGCTGCTATTTTACTTCTTTGTTTGACCATTCTAAATGCCTATGGCAAATATTATTGTACTTCCTCTGTTTCAGGATATAAGACGTTTTGACTTTAGTCAAAGTCAAACTACTCTAAGTTTGACTAATTTTGTAGAAAAAAATAGTAATATTTTTAACCCAAGACTAATATATTATGAAAATTTATTCAATTATAGATTTAATGAAACTATGCTGGTGCTGTAAATATTACTATTTTTTTCTATAGAGTTAGTCAAACTTAGAGTAGTTTGACTTTGACCAAAGTCAAAACGTCTTATAACCTAAGACGGAAGGAGTAACATTTTGTTTTTTTGCTTACAGTTTCACTGACACTTTCCTTTGTAGGTTGGTAGATCTGGCAGATTCGGCCACCTTGGTTTGGCTGTGAATTTGATCACCTATGAGGACCGTTTTAACTTGTATGTAATTCAGATCATCAGTGCTATAGCTCCTTTCTGTATCCTGTTTAGCTGATTAACATTTTTTTGAGGTGTGTGTATGCGCGTGCAGGTATCGCATTGAACAAGAGCTTGGAACCGAGATAAAACCAATACCACCTCAGATAGACCGAGCAATATATTGCCAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016821

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016821&oldid=65715"