BGIOSGA016827

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Revision as of 04:35, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016827| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016827, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA016827

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016827, complete gene.

LocusTag

OSIGBA0159I10.8

Ensembl Transcript ID

BGIOSGA016827-TA

Ensembl Protein ID

BGIOSGA016827-PA

Length

4966

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25431233..25436198

Sequence Coding Region

25431233..25431347,25431423..25431561,25432480..25432551,25432642..25432785,25432870..25432998
,25433287..25433406,25433483..25433544,25434405..25434638,25434727..25434953
,25435019..25435151,25435255..25435412,25435607..25435819,25435950..25436198

Genome Context

<gbrowseImage1> name=IndicaChromosome04:25431233..25436198 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:25431233..25436198 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGGCTGCTCGGAGTCTCCCTCCTCGTCGCGGGGCTCGGCTGCGCGCTGCTCGTCGCGCCCTCGGAATCAGCTGCAGATGACGGTATCAATTGCCCTTCCCATGTGTATTTATCTGCGCTTCTTGCTTTCAAGAAGGCCATTTTCGAGGACCCTCTCGCCAAGCTGTCGGACTGGAACTCCAAGGATGAGAATCCTTGCGGCTGGACAGGGGTGGGGTGCTCGCCGTTCGACAGCCGCGTGGTGACTCTGGAATTGGCAAATTCATCGCTCAAAGGATTCCTGGCACTAGAGATTGAATCCCTGAGTTCTTTACAAAAACTCATATTGGATCACAATACACTCATGGGTCCAATACCAAAAGGAATTGGCAAGCTAAGAAATCTAATTATGTTGAACCTCAGCACCAATCAACTCGATGGGCCCATTCCCATTGAGATTGGTGACATGCCAAAAATCTCAAAAATAGACCTTCGTGCGAATCGGTTGGATGGTGCTATCCCCCCTGAGATTGGTAATTTGACGAGCCTCACTGAGCTACAATTGAGCAATAATAGCCTTACAGGGACTATTCCTGGAAGTAATGATTCAAGCATGGTATCCACCAACAGAGACGGTCAAATAGGATTGTGCCGATTAACTCAGCTAACTGATATGGACCTCTCTTATAACTATTTGGCTGGAGATGTTCCTACATGCTTCATGCAAATCCGAAGATTAAGCTTGGTAGGAAATTGTTTCGAGAACAATGACACAACGAATCGTCCTGACAATCAATGTGAAAACAGCCAGAAAGGAAATGAAAGCAGCCGTGTTGATGGAAACCAGCAGAAAAGCTTTCAACAACCACTTTGGCTTCTTATTCTAGAAGTCATTACAGCAATTTCATTGCTTACTGTGTTAACACTATGTACTATAGCTGGTCTCAGAAGATGCAAAGCTAGATCCTCCAGAAACAGTGGTACATGGACAAGGGCTATAAGCTGGAAGGAAAATACTGTAATTTCGATTGATGATGACTTGCTGGCGAATGTGCCAAAAATAAGTCGGCAAGAGCTTGCAGAAGCCTGTGAAGACTTCAGCAATATCATTGGATCTACTCATGACACGGTGGTGTACAAAGGAACTATGAAGGATGGCAGTGAAATTGCTGTTGTGTCACTATCAGCTTCAGTACATTACTGGACGAGTTACGTTGAGCTGTACTTCCAGAAGGAGGCAAGAAGAACTCTGCATCTTGTGGTAGAAATGGCCAGATTGAGTCATGAAAATGTTGCGAAGATGGTGGGATACAGCAAGGAGTCCGATCCATTTTCGAGAATGCTAGTCTTTCAGTACCCACCAAATGGGACACTCTATGAGCATCTTCATGATGGAGAAGGATATCAGCTATCTTGGCCCAGGCGGATGAAAATAGCACTCAGCATTGCTCGCGCCCTCAGATACCTGCACACTGAGATGCAGCCTCCATTTGCAGTTGCTGCACTGACATCAAGTTCAGTTTATCTAACTGAAGATTTCTCCCCAAAGATAATTGATTTTGAGAGATGGAGAGCTCTCCTGACAAAACCAGGGCTCAGCTCTGGCAGCATAGTGAACGGGTCATTCAACAACATCATAGACTCGCGGCACAGGCGTTTCATGGACATCCAGGCCAACACGTTTGCTTTCGGGGTGATTCTGCTGGAGCTGATAAGTGGAAGAGCCCCAGTTTCCAAAGATACAGGAGATCTTGTGGACTGGGCAAGGAAGCACTTGGACCAGACCGAAGAATTCATCAAGCTGGTCGACCCGAAGCTGATGAACGCCAACCATGAGAACCTGGGCATCGTCTGCAACGTGGTGAACCTCTGCATCGACGCCGAGCCGTGCCGGAGACCGTCGATGAACATGATCACCGCCATTCTGGAGGAAGGCATCGACACGTCGCCGGCGACCGTCCTTCGGGACTCCTCCCTGGCATGGGCGGAGGCAGAGATTGCCATCTCGTAG</cdnaseq>

Protein Sequence

<aaseq>MARLLGVSLLVAGLGCALLVAPSESAADDGINCPSHVYLSALLAFKKAIFEDPLAKLSDWNSKDENPCGWTGVGCSPFDSRVVTLELANSSLKGFLALEIESLSSLQKLILDHNTLMGPIPKGIGKLRNLIMLNLSTNQLDGPIPIEIGDMPKISKIDLRANRLDGAIPPEIGNLTSLTELQLSNNSLTGTIPGSNDSSMVSTNRDGQIGLCRLTQLTDMDLSYNYLAGDVPTCFMQIRRLSLVGNCFENNDTTNRPDNQCENSQKGNESSRVDGNQQKSFQQPLWLLILEVITAISLLTVLTLCTIAGLRRCKARSSRNSGTWTRAISWKENTVISIDDDLLANVPKISRQELAEACEDFSNIIGSTHDTVVYKGTMKDGSEIAVVSLSASVHYWTSYVELYFQKEARRTLHLVVEMARLSHENVAKMVGYSKESDPFSRMLVFQYPPNGTLYEHLHDGEGYQLSWPRRMKIALSIARALRYLHTEMQPPFAVAALTSSSVYLTEDFSPKIIDFERWRALLTKPGLSSGSIVNGSFNNIIDSRHRRFMDIQANTFAFGVILLELISGRAPVSKDTGDLVDWARKHLDQTEEFIKLVDPKLMNANHENLGIVCNVVNLCIDAEPCRRPSMNMITAILEEGIDTSPATVLRDSSLAWAEAEIAIS</aaseq>

Gene Sequence

<dnaseqindica>1..115#191..329#1248..1319#1410..1553#1638..1766#2055..2174#2251..2312#3173..3406#3495..3721#3787..3919#4023..4180#4375..4587#4718..4966#ATGGCGAGGCTGCTCGGAGTCTCCCTCCTCGTCGCGGGGCTCGGCTGCGCGCTGCTCGTCGCGCCCTCGGAATCAGCTGCAGATGACGGTATCAATTGCCCTTCCCATGTGTATTGTATGTATCTATTTTTCCATCTTTTGTGCCGTTCGTTTCTTGAGAAGTTGTTGCGTTGTTGTTGTTGTTGCGCAGTATCTGCGCTTCTTGCTTTCAAGAAGGCCATTTTCGAGGACCCTCTCGCCAAGCTGTCGGACTGGAACTCCAAGGATGAGAATCCTTGCGGCTGGACAGGGGTGGGGTGCTCGCCGTTCGACAGCCGCGTGGTGACTCTGTAAGAACTGGTTCCGCTTGTTCTCCTGTTGGTTTTTTTCTTTCTTTTCGTTGCATCACTTTAAAACATCATGCGGCTGAGATAGAACTTTAAGTTTTTGTTTAAGCAATCCACCATTTCTCGCGGAGTATTTGTGCATGCCCTGTTTTGGTTCATGTCTTGCACGGATGGAAGAAGTTTTTTCAGTCATAGGTTATCCTCTTTCAGAGTTTTTTAATTTTTTTTTAGAAATAATGGAATAACATTCCAGCTCTTTCAGAGCTTCTTGAACATGCACTTTCTCCTATGAAAATTAAAAACTGGCTGGAGGCCTCTCTATAACAACAGCAAGTCAGAATGATGCATGTTCTTTCAGAGAACAGTGGGCCTTAAGTTTTCTGGCTGCACCACAAGACATCCAGCTGGAAGCTATCATAGAGTTTTACCTTCTTTTATTTGTTTTCTCTTATGTTCAGTTGACTCAAGAAGCCCCAACAGGGAAAGAAGAGATTATGGATTTGTGGTCCCTAGGAACAAAAAAAAAAATCAATCCAACAGATTTCAGTTATCTATTACAATAAATATAATCCAAGTGGTGTTTATCCAAACACCAAAGTCAGATAAAATGAATATATAGTTTTATTTACACACGTTTTCTGTTCAAGTAAAAAATCACTAAATGTTCAGCATTGCAGAAATTTCAGTTGGTGTGTATTCCCTCGTCCCAAAATATAGCAACCTAGGACCGGATGGGACGTATCCTAGTACTACGAATCTGGACAGGGGACATGTCAAGATTCGTAGTACTAAAATACGTCCCATCCGGTACTAGTTTGCTATATTCTGGGACGGAGGAAGTACATTTTATTGTACATTTTATTGATAAACTTCCCTCTTCTCTATTGTAAAGTATCTTATTATTTACACGTTGTTATCCAGGGAATTGGCAAATTCATCGCTCAAAGGATTCCTGGCACTAGAGATTGAATCCCTGAGTTCTTTACAAAAACTGTATGTACTTATATGTCCATTTGATTCAATAATAAACTTGACCTGTTAGCCACTACTGAACTGATAGCAATCTTGGTGAACTTCTTGCAGCATATTGGATCACAATACACTCATGGGTCCAATACCAAAAGGAATTGGCAAGCTAAGAAATCTAATTATGTTGAACCTCAGCACCAATCAACTCGATGGGCCCATTCCCATTGAGATTGGTGACATGCCAAAAATCTCAAAAATGTACTGACCAAGAAGCTATAATCAACTTATATTTCTTCAGAATATGTTCAAAATTCATAACTCATCTATTGCCTTATGCCCTAGAGACCTTCGTGCGAATCGGTTGGATGGTGCTATCCCCCCTGAGATTGGTAATTTGACGAGCCTCACTGAGCTACAATTGAGCAATAATAGCCTTACAGGGACTATTCCTGGAAGTAATGATTCAAGCATGTAAGTAATACTTTTCAGAGTTCTCCAAATTCAAAGTCAAGTAACTGTTTTCAGCATGCATAAACTGGAAATGCATGGAAGAACCAAATAATGTTTCTTCTATAGGAAGGAATTAAAGTGATTTAGTTAAGAAGTAGACATCAATCAGGATTGACTCCATCCTGCAGTATTTACAGTAAAAGAAAGTATGAGTAGTTATGATTTATCATATACAAGCAAGTCTGATGAGATCAGAACCAATTATAATGCTGACAAACATTTGAATAAGCAATGTCACGCATCTTTCAGGGTATCCACCAACAGAGACGGTCAAATAGGATTGTGCCGATTAACTCAGCTAACTGATATGGACCTCTCTTATAACTATTTGGCTGGAGATGTTCCTACATGCTTCATGCAAATCCGAAGGTACACCTTGCTTTCTGTGGCTTGGATGGTTCAGTTTAGTCTTTCTGAACTTACCTGCTTTGCAGTATTTGAACAGATTAAGCTTGGTAGGAAATTGTTTCGAGAACAATGACACAACGAATCGTCCTGACAATCAATGTATGGCTATATTTCATTTTAACATGTTAATATCATTAATGCAGTTTAGTACTATTTTCAGCACTAAATTCAGCGCAAAGTTTTCTTACCGTTTGCCGCGATGTTCGATGTCATTTTCACAAGAGCGTATAAACATTATATATTTTTAGATTCACCTAACGGTTCATTTTTGCTGTCAAAATGTTACAGAAACGAAATTATTGTATGTATTACTTCTTAATAGGTAATATCCATGGCAACCTTGATAACTAAGGGACTACTGTCTACTTCCACCGGTTAGGCTAGGCTAATATGAAAACTGATGCACATCCATGTTCAAAAAAAAAAAAAGTTACACATCCATTTCTTCATTATTCAAAGTTAATTGAGTAATTTTTGGGTCCCGATAACATAGGTGGTGTATAGACCGTCCCAATTTACTAGCTGTAGCAAAGTAGGCCCTACGTTGTAAATGACATCATTAGTTTTTAATCACTAATGCTACTCATGGTGACTTAGGCATAGTGGAATCTTAGCTATCGTTGATAACATAAATAACTATACTTTGGCACTTTGTTTCCTTCCTTCTTGGACGTTATCTCTCACATTCTTCCTTTTGTCCTCCATGCTCTCTGTATGTCGGTATTTTATTTCTAAGTATTCAATTGTTCTGTTGGATTTTTATAATTCAGCACTGAACTGCCATGAATCAGGATTTAACCTATATTTGTGCATTTTCAAATACGACATGCACATACTTTTATGTTTGATATATGAGACCGCATGAGCCTTCTAAAGTAATTTATGAAACAACCAAACTAGAATGTTTATACTGCTTTAGTCAACTGATCAATGAGCAAGTGCATGTGCTGTAATTACAGGTGAAAACAGCCAGAAAGGAAATGAAAGCAGCCGTGTTGATGGAAACCAGCAGAAAAGCTTTCAACAACCACTTTGGCTTCTTATTCTAGAAGTCATTACAGCAATTTCATTGCTTACTGTGTTAACACTATGTACTATAGCTGGTCTCAGAAGATGCAAAGCTAGATCCTCCAGAAACAGTGGTACATGGACAAGGGCTATAAGCTGGAAGGAAAATACTGTAATTTCGATTGGTAAGTGTTTCTTTTTATTTGTGTGTGTGTGAGTGACTGGCGAAGTAAATATTGCACTTCCTTGGTTACAGAATGTTTGCTTGTGTAGATGATGACTTGCTGGCGAATGTGCCAAAAATAAGTCGGCAAGAGCTTGCAGAAGCCTGTGAAGACTTCAGCAATATCATTGGATCTACTCATGACACGGTGGTGTACAAAGGAACTATGAAGGATGGCAGTGAAATTGCTGTTGTGTCACTATCAGCTTCAGTACATTACTGGACGAGTTACGTTGAGCTGTACTTCCAGAAGGAGGCAAGAAGAACTCTGCATCTTGTGACTCGAAATTTCAAAAGGTGCAGCTATTTGCTTATATCTCATGGTACTTTTGAATTCTTCAGGTGGTAGAAATGGCCAGATTGAGTCATGAAAATGTTGCGAAGATGGTGGGATACAGCAAGGAGTCCGATCCATTTTCGAGAATGCTAGTCTTTCAGTACCCACCAAATGGGACACTCTATGAGCATCTTCATGGTAACCCAATGATCTCTCATCTTGTTGCCTTTCTGTTCAAAAGGTTGATACCACATGACATGGTGATAATAACTTAAATTTTGATGTATGCTATTTCTTGCAGATGGAGAAGGATATCAGCTATCTTGGCCCAGGCGGATGAAAATAGCACTCAGCATTGCTCGCGCCCTCAGATACCTGCACACTGAGATGCAGCCTCCATTTGCAGTTGCTGCACTGACATCAAGTTCAGTTTATCTAACTGAAGATTTCTCCCCAAAGGTCCGTCTCATCTGCTTGTGCCTTGTGACATGGCAATGAACATGGTGTCCTAGATTCGGTGCAGTCACACACAAATTGTCCTGTTCATGTAACAGCTTTTTTTTAGATAATGGATTAGATTAAACCCAGCCTCTACACCTTTGTGGGGTGTACACAGCTAAATGTAACAGCTGAAATGGTTTATGCGTTTGCAGATAATTGATTTTGAGAGATGGAGAGCTCTCCTGACAAAACCAGGGCTCAGCTCTGGCAGCATAGTGAACGGGTCATTCAACAACATCATAGACTCGCGGCACAGGCGTTTCATGGACATCCAGGCCAACACGTTTGCTTTCGGGGTGATTCTGCTGGAGCTGATAAGTGGAAGAGCCCCAGTTTCCAAAGATACAGGAGATCTTGTGGACTGGGTAAGTAACTTGGCCTGAATCATGATTTGACACCAGTAATTCCAGACATTGAATTATCAGATAAATGAAAACCGTGGCACTAGTCTGAAAGTCTGAAACTCTGCAATGTTGGTCCAACTTGGGGTCACAGGCAAGGAAGCACTTGGACCAGACCGAAGAATTCATCAAGCTGGTCGACCCGAAGCTGATGAACGCCAACCATGAGAACCTGGGCATCGTCTGCAACGTGGTGAACCTCTGCATCGACGCCGAGCCGTGCCGGAGACCGTCGATGAACATGATCACCGCCATTCTGGAGGAAGGCATCGACACGTCGCCGGCGACCGTCCTTCGGGACTCCTCCCTGGCATGGGCGGAGGCAGAGATTGCCATCTCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016827

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016827&oldid=65721"