BGIOSGA016860

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Revision as of 04:36, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016860| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016860, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA016860

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016860, complete gene.

LocusTag

OSJNBB0103I08.18

Ensembl Transcript ID

BGIOSGA016860-TA

Ensembl Protein ID

BGIOSGA016860-PA

Length

3013

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25989045..25992057

Sequence Coding Region

25989045..25989203,25989762..25989851,25989927..25990166,25990253..25990474,25990576..25990885
,25990982..25991301,25991390..25991499,25991575..25991669,25991773..25991849
,25991962..25992057

Genome Context

<gbrowseImage1> name=IndicaChromosome04:25989045..25992057 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:25989045..25992057 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGAGCACTGTTCTGTGCGTGCTGCTGCCCACTGTCCAAACTCCAAAGCACCCACACCCATTCCACGGCCATACACATCCGCCGCCCAGACTTTTGGACGGGGTGGATCTCTTTTGAACAGCACTTTTCCTGGGGAGGCAGCCGGCTGCGGGGAGGTGAGAGGCAAACAATGTGGTGTTGCTCCTAGTCATGACAACGATACTCTTTTTGTGGGCAATATCTGCAAGACATGGACTAAAGAACATCTGAAGGAGAAACTCAAGAGTTACGGTGTTGAGAATTTTGATGATCTACTATTAGTTGAGGACAGCAATAATCCAGGAATGAATCGTGGGTATGCTTTACTTGAGTTTTCTACTCGCCCTGAAGCAATGGATGCTTTTAGGCGATTGCAGAAGAGGGATGTAGTTTTTGGAGTTGATCGTAGTGCAAAGGTTTCCTTTGCTGATTCCTACCCCGAAGTTGACGATGAAATAATGGCACAGGTTAGAACTGTATTTATTGATGGCCTTCCTCCCTCATGGGATGAAGATCGTGTCAAGAAGTACCTTAAAAAATATGGAGCTATTGAGAAAGTTGAACTAGCCCGAAATATGCCAGCAGCCAAGAGAAAGGACTTTGGGTTTGTTACTTTTGATACACATGATAATGCTGTTGCATGTGCTGATGGGATAACTAATTCTGAGATTGGTGAAGGTGACAGCAAGGCAAAAGTGAGAGCCAGATTGTCGAGACCATTGCAGAGACCTCCTAGAATGAAGCATGGATTAAGAGGAAATTTTAGGGTTGGGCAGGGTGCTCCTCGAGGTGGACGTTTTGCATATGATCGTCCTCCTCCACTTCGCCGGCCTCCACCTCGTCTTTTAAGACCCGATGTTAGTCGCTTACCACCACCGGTCAGGAGCCACCCACTGAAGAGGCCAGTAGATATTAGAGATAGGCGCCCTGTTATGTCAATACCAGATAGAGTTAGGCGTTTGCCTCCACCCGAGAGATCATATGACAGAAGGCCCCCAGCTCCTGTGTACCCAAAGAGAAGCCCAAGGAGAGAATATGGAAGGCGTGATGAACTTCCTCCGCCAAGAAGCAGAGCTACCTTTGGTGACTATAGTTCAAGAGTTCCAGTGGATAGACGCCCCTATAGGGATGATTATTCACCCCGGGGGTCAGCCTATTCAGACCTAGGTCCTCGTAGTGCTCCCCGTCTTTCTGATAGGCGAGCATATATTGATGATGGTTATGGAGGGAAGATTGACCGTTCTTTACCAACATATAGGGAGGGCCGTGGTCGTGATTATGATACAATGTCTGGTTCAAAACGCTCATATGCTGAGATGGATGATGTGCCACCTCGATATCATGACATTAGTGTTCGTCAGTCTAAGGCACGCTTAGACTATGATGTTGGTGGCAGCAGTGCCCGGTATGCAGATACATATAGCGAGAGGCTTGGACGATCACATGCGGGATACAGTGGTGGCAGATCTGTCTCTGGTCATGATCCAGTGTACAGTAGTGGTCGGCATGGCATGAATTATGGAGGTTCCGCAAGCAGTAATGATGCTGGTGGAATGTACTCATCAAATTTCAGTGGTAGCTACATGTCTCGTGGGTCTGATGTTGGTGGAAGTTCATATTCATCACTTTACTCAGGGCGTAATGTAGGTAGCAGCAGTGGCTACTATGGCGGTAGTGGTTCTAGTTCATATTACTGA</cdnaseq>

Protein Sequence

<aaseq>MGEHCSVRAAAHCPNSKAPTPIPRPYTSAAQTFGRGGSLLNSTFPGEAAGCGEVRGKQCGVAPSHDNDTLFVGNICKTWTKEHLKEKLKSYGVENFDDLLLVEDSNNPGMNRGYALLEFSTRPEAMDAFRRLQKRDVVFGVDRSAKVSFADSYPEVDDEIMAQVRTVFIDGLPPSWDEDRVKKYLKKYGAIEKVELARNMPAAKRKDFGFVTFDTHDNAVACADGITNSEIGEGDSKAKVRARLSRPLQRPPRMKHGLRGNFRVGQGAPRGGRFAYDRPPPLRRPPPRLLRPDVSRLPPPVRSHPLKRPVDIRDRRPVMSIPDRVRRLPPPERSYDRRPPAPVYPKRSPRREYGRRDELPPPRSRATFGDYSSRVPVDRRPYRDDYSPRGSAYSDLGPRSAPRLSDRRAYIDDGYGGKIDRSLPTYREGRGRDYDTMSGSKRSYAEMDDVPPRYHDISVRQSKARLDYDVGGSSARYADTYSERLGRSHAGYSGGRSVSGHDPVYSSGRHGMNYGGSASSNDAGGMYSSNFSGSYMSRGSDVGGSSYSSLYSGRNVGSSSGYYGGSGSSSYY</aaseq>

Gene Sequence

<dnaseqindica>1..159#718..807#883..1122#1209..1430#1532..1841#1938..2257#2346..2455#2531..2625#2729..2805#2918..3013#ATGGGCGAGCACTGTTCTGTGCGTGCTGCTGCCCACTGTCCAAACTCCAAAGCACCCACACCCATTCCACGGCCATACACATCCGCCGCCCAGACTTTTGGACGGGGTGGATCTCTTTTGAACAGCACTTTTCCTGGGGAGGCAGCCGGCTGCGGGGAGGTCTCTAGTCCACGAGTGTTCGCGAGCGAGATTATCTCACGAATCTCAAGTTCTCAACTGAGCTAGATGCTGACTGGGTCAGGCGCTACCCCATGCTAGCCTCTTCGGGTCTGCTCTTGACTAAAGGATCGGCTTGATTATTTTCTCAATTTTTGCTAGTATGTTTTTAAAATTGATAAATGGTGTTTTTATATAAAATATACGTAGAAGTTACTTTTTAAAACAAATATTTTTTAAATAATCCACCCTCAATTAATCACATGCTTATTTGTGTGTGTATTTAACGACTTAAAAACAAATATTAGAAGGAAGCTAAATTAAAAAAATTCTAAAATAATCTTCAAAATTGAGTTTTGTCTAGAAAATATGCTTGTGCGTTGCAACAGATAAATGCTATTTTAACCTAATTATTGTTATACGGTTTGGCTAGGGTGAATTTCACTATGGGAATTCGCTTGATTATTTTTTCTAGAAAATCATGAGCTGCATTAGGAGTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCTGTAGGTGAGAGGCAAACAATGTGGTGTTGCTCCTAGTCATGACAACGATACTCTTTTTGTGGGCAATATCTGCAAGACATGGACTAAAGAACATGTAAGATGCTGAAACAGTTTTTCTTTTTTCCTATTCTGTTGTTACCTGAATAATAACTTATTTGGGCATGTACAGCTGAAGGAGAAACTCAAGAGTTACGGTGTTGAGAATTTTGATGATCTACTATTAGTTGAGGACAGCAATAATCCAGGAATGAATCGTGGGTATGCTTTACTTGAGTTTTCTACTCGCCCTGAAGCAATGGATGCTTTTAGGCGATTGCAGAAGAGGGATGTAGTTTTTGGAGTTGATCGTAGTGCAAAGGTTTCCTTTGCTGATTCCTACCCCGAAGTTGACGATGAAATAATGGCACAGGTAACCACTTATTTTGGTGCTTTTGTTTGTTGATGTTGCAAATTTGATTAAATCTGTTGAATCCTTATTCTGGTTCTTTGGTTCAGGTTAGAACTGTATTTATTGATGGCCTTCCTCCCTCATGGGATGAAGATCGTGTCAAGAAGTACCTTAAAAAATATGGAGCTATTGAGAAAGTTGAACTAGCCCGAAATATGCCAGCAGCCAAGAGAAAGGACTTTGGGTTTGTTACTTTTGATACACATGATAATGCTGTTGCATGTGCTGATGGGATAACTAATTCTGAGATTGGTGAAGGTGACAGCAAGGTCTGTTTCCCCAACTGAGTTTGATGGGTCTTTTTTACTGTCTACTCATTCTTTTGGACATGAACTAATATTACACAACACCTTGCTACTTGATGGTTCAGGCAAAAGTGAGAGCCAGATTGTCGAGACCATTGCAGAGACCTCCTAGAATGAAGCATGGATTAAGAGGAAATTTTAGGGTTGGGCAGGGTGCTCCTCGAGGTGGACGTTTTGCATATGATCGTCCTCCTCCACTTCGCCGGCCTCCACCTCGTCTTTTAAGACCCGATGTTAGTCGCTTACCACCACCGGTCAGGAGCCACCCACTGAAGAGGCCAGTAGATATTAGAGATAGGCGCCCTGTTATGTCAATACCAGATAGAGTTAGGCGTTTGCCTCCACCCGAGAGATCATATGACAGAAGGCCCCCAGGTGTGCAGATGTTATGTGCAATCTATTCTCTCTCTCTCTCTTCTTTTGCTGTGCAAACCACTGTAGGTCACTTTCTCATACTTCATCTGTTTACAGCTCCTGTGTACCCAAAGAGAAGCCCAAGGAGAGAATATGGAAGGCGTGATGAACTTCCTCCGCCAAGAAGCAGAGCTACCTTTGGTGACTATAGTTCAAGAGTTCCAGTGGATAGACGCCCCTATAGGGATGATTATTCACCCCGGGGGTCAGCCTATTCAGACCTAGGTCCTCGTAGTGCTCCCCGTCTTTCTGATAGGCGAGCATATATTGATGATGGTTATGGAGGGAAGATTGACCGTTCTTTACCAACATATAGGGAGGGCCGTGGTCGTGATTATGATACAATGTCTGGTTCAAAACGCTCATATGCTGAGATGGTGAGGGCAGTTAATTATTGTTCTCTTGTGTTTCATGCTTTCTCCTCATATTCCTCAGCCAACTAAGACATTGCTATTGTTATGTCAGGATGATGTGCCACCTCGATATCATGACATTAGTGTTCGTCAGTCTAAGGCACGCTTAGACTATGATGTTGGTGGCAGCAGTGCCCGGTATGCAGATACATATAGCGAGAGGTTGGTGTACATTTTGAAATGTTCCTTCTCTTTGCTTACATTTTGATCTTACCTGTACATTGCTTGTTTTTGAAGGCTTGGACGATCACATGCGGGATACAGTGGTGGCAGATCTGTCTCTGGTCATGATCCAGTGTACAGTAGTGGTCGGCATGGCATGAATTATGGAGGTATATGCTCTTGAACGCTCTGTTGTGTCAGGGTACCTGTGCTCACGTGCTCAATATATATTAGATATCTATTCTCACACCATTTGGTGTTTCACCTTTTCAGGTTCCGCAAGCAGTAATGATGCTGGTGGAATGTACTCATCAAATTTCAGTGGTAGCTACATGTCTCGTGGGTCTGATGTGAGTCTTCATCAAAATGTTATCTCCAGCTCATTATCTATATCAATTTTTGTTGGCCCAAGCTTTCTATCATGTTGGTTTCCCCAATTTATTCATATTTCTCTTTGTGCAGGTTGGTGGAAGTTCATATTCATCACTTTACTCAGGGCGTAATGTAGGTAGCAGCAGTGGCTACTATGGCGGTAGTGGTTCTAGTTCATATTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016860