BGIOSGA016875

From RiceWiki
Revision as of 04:36, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016875| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016875, complete gene.| tag = OSIGBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016875

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016875, complete gene.

LocusTag

OSIGBA0106P14.1

Ensembl Transcript ID

BGIOSGA016875-TA

Ensembl Protein ID

BGIOSGA016875-PA

Length

2084

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26220416..26222499

Sequence Coding Region

26220416..26220524,26220607..26220917,26221102..26221167,26221362..26221502,26221593..26221670
,26221746..26221796,26221887..26221921,26222040..26222148,26222293..26222499

Genome Context

<gbrowseImage1> name=IndicaChromosome04:26220416..26222499 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:26220416..26222499 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGCAGCTTGGTCGACACAGCCGCCGCCACTCTCTGCCTGGCGGCGGCCGTCGGCGGGCGGCGCCGCGCCGGCAGCTTCTTGAACTGCTCGTGCTCCTCCAAAGAGTACAGGGTGAGCGCATCCTACTCCATTGGGCGGATGCTGAGCGGGGTGAGGTCGGCGGCGCGCAAGAAGCTGTTCAGGAGCGAGCCGGCCGACCTGCTGGGGATCAGCTGGTCGCCGGACTCGCCGCCGTCGAACGGCACCGACGGCGGCCACCACCACCATTGGTGGACGGCTCTCGAGAACAACTTCGTCCTCGAGTCCTCCGAGGACGAGTACGGCGGGGTCGTCGTGGACGCCGACAGGCTGCCGTCCGACAAGGCCGCCTTCGCGCGCTCGCTCGCGGCGTCACTCTCCTACTGGAAGTCCGTGGGAAAGAAAGGGGTTTGGCTAAAGTTACCAGTGGATCGCTCAGAGTTTGTTCCTATAGCAGTGAAGGAAGGTTTCAAGTACCACCATGCCGAGGAAGCATATGTGATGCTGACATACTGGATTCCTCATGAAGAGCCATGTATGCTCCCTGCAAATGCATCTCACCAGGTTGGAGTTGGGGGGTTTGTGATCAACGATCAAATGGAGGTCCTAGTGGTGCAAGAAAAGTACTGTGGTTCATCTTTGGATGGTGCTTGGAAACTCCCCACAGGGTTCATTCTTGCGTCGGAGGAAATATTTACAGGAGCTACTAGAGAAGTCAAGGAAGAAACTGGGGTTGACACTGAATTTGTGGACGTTGTTGCTTTTAGGCATGCACACAACGTGGCATTTCAGAAGTCCGACCTGTTCTTCATCTGCATGCTAAGGCCTACATCAAACAATATCAAAATCGACGAAACAGAGATTCAGGCAGCGAAGTGGATGCCGCTGGAGGAGTTCGTCAAGCAGTCGTTCATCCAGGAGGACCACATGTTCCAGAAGATCATGGACATCTGCATCCAGAGGCTCAGGAAGTGCTACTGCGGCCTGACCGCGCACAACGTCATCTCCAGGTTCGACGGCAGGAGGTCGACGCTGTACTACAACGTTTCTGAACCTGAGGATGTGAACTGCAATGCTTCTTGA</cdnaseq>

Protein Sequence

<aaseq>MESSLVDTAAATLCLAAAVGGRRRAGSFLNCSCSSKEYRVSASYSIGRMLSGVRSAARKKLFRSEPADLLGISWSPDSPPSNGTDGGHHHHWWTALENNFVLESSEDEYGGVVVDADRLPSDKAAFARSLAASLSYWKSVGKKGVWLKLPVDRSEFVPIAVKEGFKYHHAEEAYVMLTYWIPHEEPCMLPANASHQVGVGGFVINDQMEVLVVQEKYCGSSLDGAWKLPTGFILASEEIFTGATREVKEETGVDTEFVDVVAFRHAHNVAFQKSDLFFICMLRPTSNNIKIDETEIQAAKWMPLEEFVKQSFIQEDHMFQKIMDICIQRLRKCYCGLTAHNVISRFDGRRSTLYYNVSEPEDVNCNAS</aaseq>

Gene Sequence

<dnaseqindica>1..109#192..502#687..752#947..1087#1178..1255#1331..1381#1472..1506#1625..1733#1878..2084#ATGGAGAGCAGCTTGGTCGACACAGCCGCCGCCACTCTCTGCCTGGCGGCGGCCGTCGGCGGGCGGCGCCGCGCCGGCAGCTTCTTGAACTGCTCGTGCTCCTCCAAAGGTATGTACATCTACCGTTTCCATCGTGCATTCGTCGGGCGATCTGGATATCTGATGGAGTTTGTGGTTTTTCGGTTGAGCAGAGTACAGGGTGAGCGCATCCTACTCCATTGGGCGGATGCTGAGCGGGGTGAGGTCGGCGGCGCGCAAGAAGCTGTTCAGGAGCGAGCCGGCCGACCTGCTGGGGATCAGCTGGTCGCCGGACTCGCCGCCGTCGAACGGCACCGACGGCGGCCACCACCACCATTGGTGGACGGCTCTCGAGAACAACTTCGTCCTCGAGTCCTCCGAGGACGAGTACGGCGGGGTCGTCGTGGACGCCGACAGGCTGCCGTCCGACAAGGCCGCCTTCGCGCGCTCGCTCGCGGCGTCACTCTCCTACTGGAAGTCCGTGGTACGTACGGGCGGCCAACATCTTGATCTCTCGGATCGAATAGAACAGATGTTGAGTTCAGTTCCTCATCAGTTCATTTCAATGTGGATACATGATGGTGGAAAGTGTTTTACAGCGGCAGAGCATACATCACCGATCACCCTCTTACTGTAGTTCACCCGTCTTATGATTTTTGATGTTTCAGGGAAAGAAAGGGGTTTGGCTAAAGTTACCAGTGGATCGCTCAGAGTTTGTTCCTATAGCAGTGAAGGTATTGTTCCTTTTCCCGTTGTGAATTCAGAATACCTGAAGCTCACCTGTAGCGTTGAATCTGAAAGATAAAATAAAAAATAAAAGAAAAAGAAAGGTGGGGGTTTTAGTCAGATATGCAATGGTGATTTTGACATTGGAATTTGGAAAGTAACTCAGGAGATTGCTGATGGTGTTGCTTAACTCTGTCTGCAGGAAGGTTTCAAGTACCACCATGCCGAGGAAGCATATGTGATGCTGACATACTGGATTCCTCATGAAGAGCCATGTATGCTCCCTGCAAATGCATCTCACCAGGTTGGAGTTGGGGGGTTTGTGATCAACGATCAAATGGAGGTCGGTTTCATCTGGTTTGCTGTTGTTTTCATTGGAACAGTTTAACTGAAAGAGTTTGTGCGTCTGACTGTATTCTCAACAATTGAATAGGTCCTAGTGGTGCAAGAAAAGTACTGTGGTTCATCTTTGGATGGTGCTTGGAAACTCCCCACAGGGTTCATTCTTGCGGTAAGAACATATGTAATGGTACTAATATATACATATGATGTGTGTCGCTGTTACTAACGCGACGCTTGCTTGCAGTCGGAGGAAATATTTACAGGAGCTACTAGAGAAGTCAAGGAAGAAACTGGGGTAAGAAATGGAACGCTTTGCTATTCAGTTCTCTCCTCATTACGATCAATTCTCAGTTCTTAAAGTACTGTGGTGTTATCAACTATGCAGGTTGACACTGAATTTGTGGACGTTGTTGCTTTTAGGTAATTATCTTCCTCATGGCAGCATGTAATCCTATTGATTAGCTCTGTTGAAACTGTTCCCCCCTTAATCTGAAACTCTGAATTTTCTCTCACCAATTTTCATCTTTTACAATGATAGGCATGCACACAACGTGGCATTTCAGAAGTCCGACCTGTTCTTCATCTGCATGCTAAGGCCTACATCAAACAATATCAAAATCGACGAAACAGAGATTCAGGCAGCGAAGGTACAACATCTTTTGAACTTGCTGAAACGTTTTCACGAATCACGACATGATGTTCAGAGTGCACATGCTGGAAGCCTGGAACAACAAATCTTTCTGGAAAAAAAAGTCTGAAACATCCCTTGTGCCCTTGGTCTCTTTTTTCAGTGGATGCCGCTGGAGGAGTTCGTCAAGCAGTCGTTCATCCAGGAGGACCACATGTTCCAGAAGATCATGGACATCTGCATCCAGAGGCTCAGGAAGTGCTACTGCGGCCTGACCGCGCACAACGTCATCTCCAGGTTCGACGGCAGGAGGTCGACGCTGTACTACAACGTTTCTGAACCTGAGGATGTGAACTGCAATGCTTCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016875