BGIOSGA016945

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Revision as of 04:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016945| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016945, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA016945

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016945, complete gene.

LocusTag

OSIGBA0111L12.9

Ensembl Transcript ID

BGIOSGA016945-TA

Ensembl Protein ID

BGIOSGA016945-PA

Length

4031

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27545889..27549919

Sequence Coding Region

27545889..27546014,27547333..27547482,27548003..27548234,27548334..27548443,27548764..27548888
,27549173..27549281,27549875..27549919

Genome Context

<gbrowseImage1> name=IndicaChromosome04:27545889..27549919 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:27545889..27549919 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGGAGAAGACGTTAGCGATGGTTTCGGGCTTGCCTAGCGCGAGGATGATGCGGCAAAGTAGGGCTTCGTGGGTGTACCAGCTGTCACCAATGACGTGTGCTGTTGCCGGCACTAGCACGCTGGTGAGCATGGAGGTGATGCATGATACCACTGGGAAGAAGGAAGTGGTTGTCTGTTATATGAACGCCCCTCTACCGTACATGATTGAAGAGAATTACGGGGGATGCTTCTTTGAAGACGACGTTGATCTTGCACAGGTTCTCCAGGACCAGGAAATAGTCTATCAATTAATACAAGGAAATTATGGTACTGGTTCGTCCAAAACTCATTCAAATCCTAGTTCTAGTTATAGCCATGGATGTGAATTGGGTGAATGGAAACCATCAGGAGTTGCAAGTTATGAAGCGCAACTAGTTGTTGATGAAGCTTTAGCTCGAGAGCTGCAACAGATGGAGGACCAACTAGCAAGTGCATCAATTGATGACCATAACATAATAGAACATGGAAGAAAGCCAATAGCTTCTTCAACATCTAGCGGTGGTAATGCTTCTGCAAGCAGACCTCCTCAGGTAGTGATGGAGGATGGCATTGATCCAGATAACATGACTTACGAGGAACTGCAACAATTAGGGGAAGCTATAGGTACTGAAAGCAAAGGGTTGCCGGAAGATGTGATAGCGCTCTTGCCTACTTCAACATACAAAATTAGGATATTCTCAAGAAAGGAAAAGCATGACGAATGTGTGATATGCTGTATGACTTACAAGAACCGAGATAGGCTGACTAAATTGCCCTGTGAGCATCAGTACCATCAAACTTGTGTCACCAAATGGTTGAAGATCAACAAGGTATGCCCTGTTTGCAACAAGGAGGTTTATGGGTCGGGCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MKEKTLAMVSGLPSARMMRQSRASWVYQLSPMTCAVAGTSTLVSMEVMHDTTGKKEVVVCYMNAPLPYMIEENYGGCFFEDDVDLAQVLQDQEIVYQLIQGNYGTGSSKTHSNPSSSYSHGCELGEWKPSGVASYEAQLVVDEALARELQQMEDQLASASIDDHNIIEHGRKPIASSTSSGGNASASRPPQVVMEDGIDPDNMTYEELQQLGEAIGTESKGLPEDVIALLPTSTYKIRIFSRKEKHDECVICCMTYKNRDRLTKLPCEHQYHQTCVTKWLKINKVCPVCNKEVYGSGK</aaseq>

Gene Sequence

<dnaseqindica>1..126#1445..1594#2115..2346#2446..2555#2876..3000#3285..3393#3987..4031#ATGAAGGAGAAGACGTTAGCGATGGTTTCGGGCTTGCCTAGCGCGAGGATGATGCGGCAAAGTAGGGCTTCGTGGGTGTACCAGCTGTCACCAATGACGTGTGCTGTTGCCGGCACTAGCACGCTGGTGAGAAAAACAGACTCCCGTCGAGGTGGTCGAGCCTGAGCTCCAACACATCCCCAAGCCTTGTTGTCTGCATGGAGCCATCACAATCACCGTCTCCTACGACCTCGGGTCTTTTAAGGAGAAAGGGATAAGATGGCAATAATGTTTTTTTTTACTGATATACGAGTCTCTTTTAATTTTGTTATGGCTAAATTACTTGGCAGATGAATCGAATCAACGTGGCACGTCAAACAAAACTATGGACTATGATTTGACGTAAGCATCATGTAGCACATAACATCTTCAAAATCACTTGTGGTAAAATGAGATGATTTTGGTAGCTGAAAGGCTATATACATAGTTTTGTCAGCCCATAGTTAAGGGAGGTAAAATGGACTTTTCTTCATATCCGTTTTATTGCTGCGGCAGTGCGGGATTACGGAATGGGGTTTGATGGGAGTTGCGTCATAATCATGAACTTATCAATGGCTTAAACCGATTTAAAATTGTCGTAAAACATGGGAGCACCGAGCACATCCTTCTCTCCTGCTTTCCATGATATTTGACCGCCACAAACAAATTACAGGCGATCTAAACCGTCCGTTCAACCTCCAATACGGATGGCCCGACGCGACCGACGCCCCACGGCCCACGGCACCTTCTCGACCCTGACGCGTGGACCCTCTAGGCTACTACTACTCATCACCGCGGGCCCCGCGAACCAGCCCCACACGACGGACGCCACCACGCTCGCGGTGGACTCGGTCCACCAAGACCGCAGGCACAGGCGCCGGCGGCGCACACAACACCGGACCGGAGCACCGGAGGCGGGATCAAGGTGAAAGGCCACTTGTTTGTGTGGACTGTGGACTGTGGTCTGTACCTCCACGGCTCCACCTCACTCGTCGCAGCTCGAGAGTTCGCCCAAGTCTCCCCCCGATCCGTGCAGAGATCCTCGTGCGTCCGAGGTAAGCACACCCCCCCCCACCCCCCCACTCCCAGTTCCTAAGCCCTCGTAGATTCGCCATTCCAACTCAGTTTTCGCGCACGAAATGTTCGTCTTCTTTCTTCGTCCTAGGTGAGCTTTATTGCAGATTCGCCGGTTCAGTTTCGTTTGCGGCTAGAAATGTTCGTGTTCGGGGGCAGTAGGATGGGTGTCGGGTGCTTGATCCGTGGTTCATGAGGAGGGTTTTGGAGTGTGAGATGATCCGAGACACCGCACTGAATTACTGATCCCGTTCTGTGCGTGTGAGCGAGGGAGAGGGAGGGAGGGAGGGAGACTGGGAGAGGAGGGGTTAGTTTTAATGTAGCCGTTGAATGATTGTGCCTGATTTGTTAGGTGAGCATGGAGGTGATGCATGATACCACTGGGAAGAAGGAAGTGGTTGTCTGTTATATGAACGCCCCTCTACCGTACATGATTGAAGAGAATTACGGGGGATGCTTCTTTGAAGACGACGTTGATCTTGCACAGGTTCTCCAGGACCAGGTTGGGTGCGACCGCCTGCTACCTTATTGTTTGATTGTTCCTATGCTACTGATTTGTTTCTTGTTTTGTTCCTGTTCTCCTTGTTGCATAGAAATCTTAACATCATGTGTTCCACCCCATGGAAAATTGTGTGTTTGGACAACACAATGTACAATGTTATGGAAATGCAGCCAAACACTTCATGGATTAGGTTGTTAATTTGTCTTTTGTTTTGTTGTAGTATTATTGAAAGTAGACCTGAAAGGTGAAACATCTTTGGCTCTCGTGGTGCCATAATAATGTGTAAAGAATAGCCTCTTGATGACATTTACATTGTAAAACTTCTAGTTCATCCCTCATTGTTACATGGTGCTAATTACCATTATCACAAAATATTTTGTACAGTACTAGTTATTTGTCGAAGGTTTTTCAGTAGGATTGTGATGTTTCTCTTTTATAGTACAACTGCACAAGTCAACAGTGCATGATACATATGAAAAATATGATCCTCATTTGCTTGATATGCTTGCACCTTGTTCAGGAAATAGTCTATCAATTAATACAAGGAAATTATGGTACTGGTTCGTCCAAAACTCATTCAAATCCTAGTTCTAGTTATAGCCATGGATGTGAATTGGGTGAATGGAAACCATCAGGAGTTGCAAGTTATGAAGCGCAACTAGTTGTTGATGAAGCTTTAGCTCGAGAGCTGCAACAGATGGAGGACCAACTAGCAAGTGCATCAATTGATGACCATAACATAATAGAACATGGTTAGTTGTTTACTGGTACTCTTCTATATAGTACAGGACAACTGGTGAGTGTCTTTCCTCTCGTAAATGCTAATACGTGGTTCAAAAATATCTGTTCAGGAAGAAAGCCAATAGCTTCTTCAACATCTAGCGGTGGTAATGCTTCTGCAAGCAGACCTCCTCAGGTAGTGATGGAGGATGGCATTGATCCAGATAACATGACTTACGAGGTGAATTCCTTCAAACCATTGTTTTGCCAGTATTTTCTCTACTGTTTCGTAAGGGGACGTGCCATTGTCAACTGGTCTTCTACTCCATGAACTTTCATTTCAAAGTACCTGTATAGTCTATGGTAACTACTGTTGTGTCATAGAAAATTCAAGTATACAAAAATTGGACGTCTCCATTTTACACACATTGCTCTAACCATGTTTACTATATAAAAATTGTAAAGTTGTTCTTTAACAGCTTATTGCTTTTAACAAATGCAAATAAATGGGATAATTGAAGCTATTTTCTTTTATTTTGTTGAATTTTGTTTGTATTTCAGGAACTGCAACAATTAGGGGAAGCTATAGGTACTGAAAGCAAAGGGTTGCCGGAAGATGTGATAGCGCTCTTGCCTACTTCAACATACAAAATTAGGATATTCTCAAGAAAGGAAAAGCATGACGAGTATGTCCCTGTCCTGATTAGATATTTCAGTGAAAATGTGATGTGCAGTTATCAACAGGTTGTTAATAAACATTTTCTATGCAACACTCTCATTTACTTATTATTATTGTAGAAGGATATTTGGTTAGTACTTTTCTGATCTTAAGTTGCATCCTTCATCATTGTGCTAGCAAAGGAAGCTCCTAGAGTACTCGTTATCTATGGCTGCATGTTCATGTTGAGTTATATTGCTTGAGTATGAAAGTATTTTTAATACCCACTTCTTTGAATGTTTACAAAAACAGATGTGTGATATGCTGTATGACTTACAAGAACCGAGATAGGCTGACTAAATTGCCCTGTGAGCATCAGTACCATCAAACTTGTGTCACCAAATGGTTGAAGATCAACAAGGTAGGCCAACCATGCTTTTCAATCTTTCCAATGTTTAGTAGTGATAAGTGTATATGTGTATTTATTGTAGTTACCGTGAATATGACCTTGATTACTTTGCTCACCGTAAAATTGTTCTGCTTTTCGAAATTCCATCTTATTACCTGGTCAGGCTAGATTTAGGCTGAGTTCAAATCTACGGGTTTGTCACCCGTCCTCCCTAGCATGCAAAATGGAGCGGCGGATTAGTGCATGATCAATTAAGTATTAGCCAAAAAAACTTGAAAAATGGATTATGAATTTTAAGCAACTTTCCTATAGTTCTTTTTTTTTGCAAAGAACACACCGTTAAGTAGTTCGGGAAGCATGCGCGTGGAAAATGAGGGAGTATAGAAGTTGCGAGAAGGGAGTATAGAACACACCCTTAGATAGAATGACAATAGTAATGTACTGACAAGAAGACTTAAATAGGTAATGAGATGGGTAAGTTATGAGGAAAGCTACCCAAGAAAAGAGCTTGTAATCTCGTGTGTTCATAGATTTACAAAATTTTTGAGACCATGTTCGCATCCAGAATGTATTGATACTGATCAGCCTTGTGACACATTTGTCAGGTATGCCCTGTTTGCAACAAGGAGGTTTATGGGTCGGGCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016945