BGIOSGA016947

From RiceWiki
Revision as of 04:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016947| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016947, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016947

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016947, complete gene.

LocusTag

OSJNBA0088I22.5

Ensembl Transcript ID

BGIOSGA016947-TA

Ensembl Protein ID

BGIOSGA016947-PA

Length

1683

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27580068..27581750

Sequence Coding Region

27580068..27581750

Genome Context

<gbrowseImage1> name=IndicaChromosome04:27580068..27581750 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:27580068..27581750 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGACCTGCGCGGATGACCAGACGGGCTGCGCCTTCTTCGCCCCCTTGCTGTCCTCCAAGGGGGCGGAGGTCGTCATCTTGGTGGCCGGCGATGAGGCGGAGGAGCAGCAGCCGGCGCCGGTGCTGACGAGCAAGCCGCCGGGTCGGCTCGCCAAGGCGGTGAACGAAGCCTGGTCCGTTTCTTTGGGCGTCGCGTTCCCGGTGACGCCGTCCATGTTCACCTGCTCGGCACGGGGCGAGGCGCGGTCCATTCTTGGCCTCGCATTCCCGATGATACTGACGGGTTTGCTGCTCTATCTCCGGTCGATGATCTCGATGCTATTCCTTGGTCACCTCGGCGGGCTGGCCCTCGCCGGCGGGTCCCTCGCCATCGGATTCGCCAATATTACCGGCTACTCTGTCCTCTCCGGCCTCGCCATGGGCATGGAGCCGATATGCGGTCAGGCCTTCGGCGCGGGCAATTACGCGCTCCTGGGCGTCACCATGCAGCGGACGGTGCTCCTCCTCATCGCGGCCGCCATCCCCATAGGTGGCCTGTGGGTGCAGATGCGGCCTCTCCTCCTCTTCTGTGGCCAGGACGCCGCCATCGCGGCGGTCGCCGAGACCTACATTTTCGCGTCTCTCCCTGACCTCGTGCTCCAGGCATTCCTCCACCCGGTGAGGATATACCTCAGGACGCAATCCATCAACCTGCCCCTCACCGTGTGCGCCGGCCTGGCCATTGCCATCCACCTCCCCATCAACTACGTTCTCGTAGTCGTCCTCGGCCTCGGCGTAAAGGGGGTCGCATTGGCGTCCGTGCTGGCCAACTTGAACCTCGTGCTCTTCCTCCTCGCCTACATCTTCTTGAAAGGCGTCCACAAGCGCACCGGCGGTTTCCTTCTGTCCGCCGAGAGCTTCCGTGGCTGGGGCGAGCTCATCAGCCTCGCGCTGCCGAGCTGCGTGAGCGTCTGCCTCGAGTGGTGGTGGTACGAGATCATGATCCTGCTGTGCGGCCTGCTGCTGAACCCGCAGGCGACGGTGGCGTCCATGGGCATACTGATCCAGACCACGTCGCTCATATACATCTTCCCTTCGTCGCTCAGCTTCGGCGTGTCCACCCGCGTGAGCAACGAGCTAGGCGCGGGGCAGCCCGAGGAGGCGAGCCGCGCAGCCACGGTGGGGCTCGTGCTCGGCTTCGGGTTCGGCGCCTTCGCCTCCGCGTTCGCGTTCCTCGTGCGCAACGTGTGGGCGAGCATGTTCACGGCCGACCCGGCCATCGTCGCGCTCACCGCGTCCGTGCTGCCCATCCTGGGCTTGTGCGAGCTCGGCAACTGCCCGCAGACGACGGGGTGCGGGGTGCTGCGCGGCAGCGCGCGGCCCAAGGACGCCGCGAGCATCAACCTCCGCTCCTTCTACCTCGTCGGGACGCCCGTGGCGCTCGTCATGGCATTCTGGTTCCACTTGGACTTCAGGGGCCTCTGGTTCGGTCTGCTCGCTGCGCAGGCCACCTGCACGGTGCGCATGCTGCTGGTCATCGGCCGGACGGATTGGGCGGCCGAGGCCAAGCGGTCCAAGCAGCTCACCGGAGCGGGCGCCGCCAACATGGAGAGTGACGACAGAGTTGCCGCGGACGAGAAGTCGCGCTTACCCGTCGATACGGACGTGGAGCGATCGAGCGATCACACTGATCGGTGTTGA</cdnaseq>

Protein Sequence

<aaseq>MTTCADDQTGCAFFAPLLSSKGAEVVILVAGDEAEEQQPAPVLTSKPPGRLAKAVNEAWSVSLGVAFPVTPSMFTCSARGEARSILGLAFPMILTGLLLYLRSMISMLFLGHLGGLALAGGSLAIGFANITGYSVLSGLAMGMEPICGQAFGAGNYALLGVTMQRTVLLLIAAAIPIGGLWVQMRPLLLFCGQDAAIAAVAETYIFASLPDLVLQAFLHPVRIYLRTQSINLPLTVCAGLAIAIHLPINYVLVVVLGLGVKGVALASVLANLNLVLFLLAYIFLKGVHKRTGGFLLSAESFRGWGELISLALPSCVSVCLEWWWYEIMILLCGLLLNPQATVASMGILIQTTSLIYIFPSSLSFGVSTRVSNELGAGQPEEASRAATVGLVLGFGFGAFASAFAFLVRNVWASMFTADPAIVALTASVLPILGLCELGNCPQTTGCGVLRGSARPKDAASINLRSFYLVGTPVALVMAFWFHLDFRGLWFGLLAAQATCTVRMLLVIGRTDWAAEAKRSKQLTGAGAANMESDDRVAADEKSRLPVDTDVERSSDHTDRC</aaseq>

Gene Sequence

<dnaseqindica>1..1683#ATGACGACCTGCGCGGATGACCAGACGGGCTGCGCCTTCTTCGCCCCCTTGCTGTCCTCCAAGGGGGCGGAGGTCGTCATCTTGGTGGCCGGCGATGAGGCGGAGGAGCAGCAGCCGGCGCCGGTGCTGACGAGCAAGCCGCCGGGTCGGCTCGCCAAGGCGGTGAACGAAGCCTGGTCCGTTTCTTTGGGCGTCGCGTTCCCGGTGACGCCGTCCATGTTCACCTGCTCGGCACGGGGCGAGGCGCGGTCCATTCTTGGCCTCGCATTCCCGATGATACTGACGGGTTTGCTGCTCTATCTCCGGTCGATGATCTCGATGCTATTCCTTGGTCACCTCGGCGGGCTGGCCCTCGCCGGCGGGTCCCTCGCCATCGGATTCGCCAATATTACCGGCTACTCTGTCCTCTCCGGCCTCGCCATGGGCATGGAGCCGATATGCGGTCAGGCCTTCGGCGCGGGCAATTACGCGCTCCTGGGCGTCACCATGCAGCGGACGGTGCTCCTCCTCATCGCGGCCGCCATCCCCATAGGTGGCCTGTGGGTGCAGATGCGGCCTCTCCTCCTCTTCTGTGGCCAGGACGCCGCCATCGCGGCGGTCGCCGAGACCTACATTTTCGCGTCTCTCCCTGACCTCGTGCTCCAGGCATTCCTCCACCCGGTGAGGATATACCTCAGGACGCAATCCATCAACCTGCCCCTCACCGTGTGCGCCGGCCTGGCCATTGCCATCCACCTCCCCATCAACTACGTTCTCGTAGTCGTCCTCGGCCTCGGCGTAAAGGGGGTCGCATTGGCGTCCGTGCTGGCCAACTTGAACCTCGTGCTCTTCCTCCTCGCCTACATCTTCTTGAAAGGCGTCCACAAGCGCACCGGCGGTTTCCTTCTGTCCGCCGAGAGCTTCCGTGGCTGGGGCGAGCTCATCAGCCTCGCGCTGCCGAGCTGCGTGAGCGTCTGCCTCGAGTGGTGGTGGTACGAGATCATGATCCTGCTGTGCGGCCTGCTGCTGAACCCGCAGGCGACGGTGGCGTCCATGGGCATACTGATCCAGACCACGTCGCTCATATACATCTTCCCTTCGTCGCTCAGCTTCGGCGTGTCCACCCGCGTGAGCAACGAGCTAGGCGCGGGGCAGCCCGAGGAGGCGAGCCGCGCAGCCACGGTGGGGCTCGTGCTCGGCTTCGGGTTCGGCGCCTTCGCCTCCGCGTTCGCGTTCCTCGTGCGCAACGTGTGGGCGAGCATGTTCACGGCCGACCCGGCCATCGTCGCGCTCACCGCGTCCGTGCTGCCCATCCTGGGCTTGTGCGAGCTCGGCAACTGCCCGCAGACGACGGGGTGCGGGGTGCTGCGCGGCAGCGCGCGGCCCAAGGACGCCGCGAGCATCAACCTCCGCTCCTTCTACCTCGTCGGGACGCCCGTGGCGCTCGTCATGGCATTCTGGTTCCACTTGGACTTCAGGGGCCTCTGGTTCGGTCTGCTCGCTGCGCAGGCCACCTGCACGGTGCGCATGCTGCTGGTCATCGGCCGGACGGATTGGGCGGCCGAGGCCAAGCGGTCCAAGCAGCTCACCGGAGCGGGCGCCGCCAACATGGAGAGTGACGACAGAGTTGCCGCGGACGAGAAGTCGCGCTTACCCGTCGATACGGACGTGGAGCGATCGAGCGATCACACTGATCGGTGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016947