BGIOSGA016977

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Revision as of 04:37, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016977| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016977, complete gene.| tag = H0404F0...")
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Gene Name

BGIOSGA016977

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016977, complete gene.

LocusTag

H0404F02.16

Ensembl Transcript ID

BGIOSGA016977-TA

Ensembl Protein ID

BGIOSGA016977-PA

Length

4412

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27984324..27988735

Sequence Coding Region

27984324..27985096,27985254..27985513,27985962..27986062,27986824..27986931,27987972..27988199
,27988631..27988735

Genome Context

<gbrowseImage1> name=IndicaChromosome04:27984324..27988735 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:27984324..27988735 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTATGATAGCAGCAACTCTTCGTCGATCGTCTAGAGTAACTGGTAGTCAGAATATCATGGAGATATGTCTTGGACCTTGTGTATCTTCTGGTGCTTCTTCAAGGTGGTTCAGCAGCTGTACTAAGCACTCAAACACTTCCATACTTAACCAGATCAAGGCAGTTGAACGGTATTCTCCAGTTAATGGTATGTCAATGATCAGTAGGGTGCCTCTTTCAGCTCATATGGACACAAACTGGTTGTCTACTTCAAATCCCAGATTTAATGCACTGCCAGGATTCTTAGGTGCTTCAAGCATCTGCCGAGCATACTCCTCAGACACTGGGATTAAGGCAGAAGTTCCACAGAATACTGTCTCAAATGTACCTTCCACAGAAACCGTTGCGCTTGGAACATCTGATGGTGGTAGTTCTTGGATTGATATCTTCGACAATGCTCGCAAGTGTACTCTAGATGCTACCACTGATGCAGGCAAGAAAGTTAAGGAGCTGACTGATGCAATTACACCTCATGTAAAACAGTTCTTTGATGCAAATCCAAACCTAGAAAAGGTTGTGGTTCCACTTGGCGGGACAATCTTTGGTACAATGATGGCTTGGTTTGTCATGCCTATCGTTTTAAGGAGGATTCACAAGTATTCGATACAGAGTCCTATATCAGCACTTTTGGGGAGCTCAACAAAGAATGATGTCTCGTATGAAACTAGCCTCTGGAGTGCATTGGAGGATCCTGCGAAATACCTTATCACATTTATGGCATTTTCAGAAATGGCTGGATTCACCGCACCAAGCATATCAGCTTATCTTCCACAGGCATGGAGGGGTGCAATTGTTCTCTCTTTTGTATGGTTCCTTCATAGGTGGAAAACAAACTTCATCACTAAAGTTGCTGCCTCAAGTATTGATCAAACCAGGTTGTCAGCATTTGATAAGATCTCGTCATTAGGACTGATTGCACTTGGAGTAATGGCTCTTGCAGAGGCTTGTGGTGTAGCTGCTCAGTCAATACTAACTGTTGGTGGTGTGGGAGGTGTTGCTACTGCCTTTGCTGCTCGGGATGTCCTTGGTAACATGCTCAGTGGGTTCTCCTTACAGTTTTCTAGTCCATTCAAAGCTGGAGAATACATAAAGGCTGGGTCAATAGAAGGCAAGGTGATTGAAATAGGACTGACTTCTACGGAATTGATGAATCCAGAACAACTTCCTGTCACTGTACCCAATTCTCTGTTCTCCAGCCAGGTGATAGTGAACAGATCACGAGCTAAATGGCGATCCAATGTGACAAAGATTCCTATTAGAATTGAGGATATTGAAAAGGTTCCTGCCATATCAGAGGAGATAAAAGTTATGTTAAGGTCCAACCCAAAGGTTGTCTTAGACTCAGAAGCACCAGCTCCTTATTGTTATCTTTCAAGATTGGAAAGTTCATATGGAGAGCTCACCATTGGATGCAACCTCACGAAAATGACAAAGGATGAGTGGCTGTCTACAACACAAGGCATTCTTCTGGAGGCTGCTAAGATTATCAAGTTACATGGCGTTGAACTGGGAAGCACCACGCAGTGCTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MSMIAATLRRSSRVTGSQNIMEICLGPCVSSGASSRWFSSCTKHSNTSILNQIKAVERYSPVNGMSMISRVPLSAHMDTNWLSTSNPRFNALPGFLGASSICRAYSSDTGIKAEVPQNTVSNVPSTETVALGTSDGGSSWIDIFDNARKCTLDATTDAGKKVKELTDAITPHVKQFFDANPNLEKVVVPLGGTIFGTMMAWFVMPIVLRRIHKYSIQSPISALLGSSTKNDVSYETSLWSALEDPAKYLITFMAFSEMAGFTAPSISAYLPQAWRGAIVLSFVWFLHRWKTNFITKVAASSIDQTRLSAFDKISSLGLIALGVMALAEACGVAAQSILTVGGVGGVATAFAARDVLGNMLSGFSLQFSSPFKAGEYIKAGSIEGKVIEIGLTSTELMNPEQLPVTVPNSLFSSQVIVNRSRAKWRSNVTKIPIRIEDIEKVPAISEEIKVMLRSNPKVVLDSEAPAPYCYLSRLESSYGELTIGCNLTKMTKDEWLSTTQGILLEAAKIIKLHGVELGSTTQCC</aaseq>

Gene Sequence

<dnaseqindica>1..773#931..1190#1639..1739#2501..2608#3649..3876#4308..4412#ATGTCTATGATAGCAGCAACTCTTCGTCGATCGTCTAGAGTAACTGGTAGTCAGAATATCATGGAGATATGTCTTGGACCTTGTGTATCTTCTGGTGCTTCTTCAAGGTGGTTCAGCAGCTGTACTAAGCACTCAAACACTTCCATACTTAACCAGATCAAGGCAGTTGAACGGTATTCTCCAGTTAATGGTATGTCAATGATCAGTAGGGTGCCTCTTTCAGCTCATATGGACACAAACTGGTTGTCTACTTCAAATCCCAGATTTAATGCACTGCCAGGATTCTTAGGTGCTTCAAGCATCTGCCGAGCATACTCCTCAGACACTGGGATTAAGGCAGAAGTTCCACAGAATACTGTCTCAAATGTACCTTCCACAGAAACCGTTGCGCTTGGAACATCTGATGGTGGTAGTTCTTGGATTGATATCTTCGACAATGCTCGCAAGTGTACTCTAGATGCTACCACTGATGCAGGCAAGAAAGTTAAGGAGCTGACTGATGCAATTACACCTCATGTAAAACAGTTCTTTGATGCAAATCCAAACCTAGAAAAGGTTGTGGTTCCACTTGGCGGGACAATCTTTGGTACAATGATGGCTTGGTTTGTCATGCCTATCGTTTTAAGGAGGATTCACAAGTATTCGATACAGAGTCCTATATCAGCACTTTTGGGGAGCTCAACAAAGAATGATGTCTCGTATGAAACTAGCCTCTGGAGTGCATTGGAGGATCCTGCGAAATACCTTATCACATTTATGGCATTTTCAGAAATGTAAGGCTTCTTTTTACTTTTTCTGGCAGATTTTATCGTTGTTGTGGATGGGGTGCAACACACTCTAGATTGATGATATTTCTTCAATATTTGCAAGAGATATATCCATCTTCGTATTGTTGAAATGTTCATTGTTCTGATGTTTTCTCTTCCTCAGGGCTGGATTCACCGCACCAAGCATATCAGCTTATCTTCCACAGGCATGGAGGGGTGCAATTGTTCTCTCTTTTGTATGGTTCCTTCATAGGTGGAAAACAAACTTCATCACTAAAGTTGCTGCCTCAAGTATTGATCAAACCAGGTTGTCAGCATTTGATAAGATCTCGTCATTAGGACTGATTGCACTTGGAGTAATGGCTCTTGCAGAGGCTTGTGGTGTAGCTGCTCAGTCAATACTAACTGTTGGTGGTGTGGGAGGTAATGTTATATTCCCTTCAGTCATAAATATTTGACGTTTAGATCAATATTACATTAATTTAAAATTTAATAAGTTTATGATATCAGGATAGTACTTTTCAACTTTCAAGGAAAATTTTATCATTACATTCCTTTTGTCTTTGAACTAATCATATGATTTTTTATGGTCAAAATTTAAAAAATTAGACCAAATTTCATCCTAAACGTCTAATATTTATGATCAGAGGGAGTAACTGTTTTGAGTAATAACATGCTATACCACATTTAAATAAAAAATGTAACTATGGTTTCTTCCAGGGCTTATCACCTCGGAATACATGAACTGAAAAAGCTCAATACAGTAATACTATAATTATTTAGGGGGATAATTTGTAGCTCTTGAGTCTTGACTGCAGTAGATGAGACTTCTAACTAAACTGGAATTCTGGATTGTTCCTCCATAATGCAGGTGTTGCTACTGCCTTTGCTGCTCGGGATGTCCTTGGTAACATGCTCAGTGGGTTCTCCTTACAGTTTTCTAGTCCATTCAAAGCTGGAGAATACATAAAGGTGCCTTCTTATATATGTGGTCACTTTTTCTGTATATTCAGGGGGCTGTATGTATAAACTGTTCATTTGCTATTCATAGTATATGTTGATATGCAGGTGTTTGGCTTAGTTACTGCCTTTAGATTCTCAAGCAATTTTCCTAGTATTGCTTCAACCTACAAGGGATACATACTGTTGTTAGAGCTTGATGTAAAGAAAAAAATATCGGTTTTTACAGAGCTGAAGGATAGCAAATATTGAAGTGTCTAAACTGTGTGTTAGGAACAAGTTTCCAGGAAAGGGTTAAGTATTGTTTTAGAGGCTGTAAGAGGGTATAAAAAAATTAGATGGACATGGGCGACAGTTTTGAGCATCACATGTATACTACATGCTTCCTAAGTTGCTATGATTATCACTAGAAATGTTTCTCGCGGTACTTGTGCTTTCAGCACTTGATAACACTAATGCTATAAACATTTTCCCCCACCTTAATAAACTCTGGCCGACTTTCTGTTGCCAGCCCGGCGAAAAATAACACTAATGCAATGCATTTCTCCAAGGAATAAGCATGCGGTCCATTTTCAGTAATAAGGTGGGAGAATTTAGGAAGAATGACAGGTTCTGTTTTAAGTGACTGGGATCTTACCTTGTTTCTCTAAAAGAATATTGCATTTCAAATTGACAACTGTGGCTGGCCAAATACTGTTTTAATCTTTTGTAATTGTTGATTTTCTATAAATTATACTTGTGGACTCCCAGCAACTGAAGGATTTTTGTTGTAGGCTGGGTCAATAGAAGGCAAGGTGATTGAAATAGGACTGACTTCTACGGAATTGATGAATCCAGAACAACTTCCTGTCACTGTACCCAATTCTCTGTTCTCCAGCCAGGTATCCTATGGCTTGCATTACTGGAAACCTTTTGAATCACATATTTGCATGTACATAGGAGTGACATGTAATATGCTTTTCTGAACCACCTTGACATTTCATTTTGTTTGTCCTATCCTTACTGTTTTGGTGTGCGCGCGCGCACGCACACACACAAAATGAATGTTTTCCAGGCAGTAACTATAGTAATGTCCTGTAATTTTATTGGAGATTGATTCTTCAAGGAACCTAGGCACTTTTGATATTTAGAAGTTTTATCATAGTATGATGCAATTTAACCTGAAAGCAGATTTCACTACTCTGGAGTAAATGATAAGCAAAATACCTAGGAGGCTAGGACAAGTGAAAACGAGATGAAATCTACTACTTCCTCCGTCCCAAAATATAACAACTTTTAGCCCTCAAGATTTGTCCCAAAATATAACAACTTCTCCACCAACATTCTCTTCCTAACCAATCACAACTTTCCACCATTCACTTTTCCCACCTACCACCACTACTTAACCAATCACAACCCTCCACCATTTACTTCTACCTACTTTCTTAATAACTGTGTCCAACTATAGAAATGCTTATATTCTGGGACGGAGGGAGTAACATTTTCAATGGTTTGCACTATGCACCGTGAACCATGGTTCACAAATCACAATTTGTAGATTCGTTAGCTGATACAGGGGTCTTTTACTGCCAAAGATCATCATCATTCGTTTTATCACTAAAATATGAAACTTATACCTTGTTCAAATTTTAAATTTTAGTCTCAGTTGGGATGGATTAAAATAAATAATCTTTGGAGCATTTAAATCACTTGAAACTTGGAATGATGTTTTTCTATTTAAATTTTGGAGGACAGAAAGCCCTCAATGCTTTGTTGCGTTAATTAACTAAAATATTACTAAAAAGATGCTGATTGTTCTGTATTTCAAGAATAAGCCTGTGAGGATTTATTCAGCGAGTTTCCCTGCATTTCTGTTTTCTGGCCTTCTCGGTAGGGTTAGCAGAAGCGTACCCTGTATCCTGATATTACTAATAACTTGCAGGTGATAGTGAACAGATCACGAGCTAAATGGCGATCCAATGTGACAAAGATTCCTATTAGAATTGAGGATATTGAAAAGGTTCCTGCCATATCAGAGGAGATAAAAGTTATGTTAAGGTCCAACCCAAAGGTTGTCTTAGACTCAGAAGCACCAGCTCCTTATTGTTATCTTTCAAGATTGGAAAGTTCATATGGAGAGCTCACCATTGGATGCAACCTCACGAAAATGGTACATTAGCTCTGTTTGTTTTACAGTTATGATATGTCATGTATTTTGATAATCCATTTGTAGCTATATGTTACACATTTTGTTGCTTTTTGGCATGTTTTGGATAACAATGTGTCTTCAGCATAACTTTTGGTCTGTACTTACCAACATCACAGCGTCATGTCTGGTCCATCCAAATTGGTAGTCGTCTGTTGCTGTTCTAGAGATAGGGCTGCAATAAAATTGAGGTTACCTAAATGTGATAATTCCATCGGAATCAACACCTTTAGCATACCATAAATTGATGGTGTTCTTATTCTTACAGGATTTACGTCCATTGTGTAATGTTGAGTCCGTTCAACTTATGAGAACTTGTTTACTAAGTAGGAGAGCAGCCAAAATTACCTATCGCTGACTCTCTATGATTCGTCATAATTCTTTGTGTATTACAGACAAAGGATGAGTGGCTGTCTACAACACAAGGCATTCTTCTGGAGGCTGCTAAGATTATCAAGTTACATGGCGTTGAACTGGGAAGCACCACGCAGTGCTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016977