BGIOSGA017012

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Revision as of 04:38, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017012| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017012, complete gene.| tag = OsI_171...")
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Gene Name

BGIOSGA017012

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017012, complete gene.

LocusTag

OsI_17172

Ensembl Transcript ID

BGIOSGA017012-TA

Ensembl Protein ID

BGIOSGA017012-PA

Length

6418

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28602328..28608745

Sequence Coding Region

28602328..28602524,28603043..28603120,28603701..28603873,28604036..28604082,28604171..28604390
,28604460..28604617,28605144..28605286,28605554..28605616,28606294..28606645
,28606789..28607041,28607455..28607654,28607786..28607906,28608299..28608336
,28608392..28608745

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28602328..28608745 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28602328..28608745 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGGGCGGAGACCGGATCGGCGCGGAGGGGAGGCGCGGCGACGTGACGGGGAGGCGCGGCGATGCGGAGGAGGCGGAGGGCGGAGACCGGATCGGCGCGGAGGGGAGACGCGGCGATGTGACGGGGAGGCGCGGCGATTTCTGCGGAGGAGGCGCGGCGATTTCGGCGATCGAAAGAGAGAGAGAGGGGGGAGATCCATATCGCCATCTTTGGGAGTTAACTACTGCTCGAAGGGCCGTAATAAGTCTTCAATGGTTGAAGGATGCAAGAGGTATTGTCATATCATTGGAAGATGGCACGTTAAAGTTCGTTAGCTTGTCGAGAATCGCAAATGATGTTCCTGTTACTGGAAGGCCATTTGTTGGAATGAAAACTCAGGGTGTTTCTACCTATCAATTGTCTGAATATTTGATCTGGAGTGTCCATGCCTCAGAAATTGCAGGCTATGCGGCTTATTGTGTGGCTGATGGAACTGCTGTTTGCTTTGAGCTTACTCCGAGATTGTGGGAAAAGGAACCTGGGAGGAACCGTGTACCATATTTTCTTTGTGGTTCATTATCAGAGGAGGGAACAACCATTAAAATTGGTATTGCATTACCAAACTCTCCTTTGTCAAATGTTCCTCTGGGGACCAAACGGGCTACTAAAACTTGCAAAGATGTAGCTCAATTGCATGTTATAGAAGAAGGGGAACTTCTTACCAACTCAGAATACAATTGTGCTATAAATCCAAGCATCAGAGATGGTCAACAAGATGAACCTGATGAAGGACAAGAAACTGGTGCCATAGTTTTAGCTGCTCCTTCAATGCAAGAGAATTTTGGCACAAGCACCAGCAGGGGTAGCGAATCCCCTGAAAAATTTGAGGGATGGTTATGCCTTATATTTTGGAATGGAGGGAGTAACAGATTATCTTTGGAACTCCCGACAGAGATGTATAAGCCTTATGGACTGAAGCTTTACCTGAGCAGCGAGGTTCTCTGTGTTTTGGGACCAGCAATTCATTACAGTGTAGGCTGCGTGTTCACGGTGGTATCATTTGCAGGGGTCCCTTGGTTCTTTGAGTTCATCCGGTCTGGAAATGTAACAAGATCAGTCTCAAAACCTCATGGGCGGAACTTGTTTCTGCAAAGCTTAGTTGAAGAAGGGCAGAATCCAAGCACTAGCAATGGTGCCAGCAACTCCCAGAAAAGTGTTGAAGATAAGGACCTGATCGACTGTCTAGAGAATGGCGTCAACTTTTGGACGGATTATTCAAAAGTTCAGTATCATCCTCAGAGTTTATATGAGTTACATGGGTCATGGACAGACTTTGACAAGTTTGATAACTATGGCAGTGCACAAGAGGTTGTTTCAGACTGGTCGCAAATAGAGGAAATGAATGAGAGGCTAAGGTTCTTTGTTGAAGAATGCGACCATATTCAGGGCATCCAGTTTATTGTGGGTGATTCAGGAAGTTTTTCCAGTGTAGCTGCACAGTTTTTGGAGAACATTGCTGATGATTACACAAATACACCTGTATTGCTTTACTGTGTGAGGGATCCAATGACCCTTGGATCATCCAGGATGAATCAAAGGGAGTCCATTATGAGAGCTCTTCATGATGCTGTTTCATTTTCAAAACTTTCGTCCTTTTGCAACCTGATGGTCCCCATAGGACCGCCTTCATTAAGTAGAAGTTACATGTCACCGTATCTTTATATACAAGACGAGAAACCATTCCATGCTAGTGCTGTTTGTGCTGCAGCAATACATTCAATTACTGCTCCATTTAGATTGCAACGAACGGGCCCGAGTTCAGACTTAGCACATTCATCTGGTAATCTTGACATTGGTGAACTTCTGCACATTTTATCTGATCAAGGTCGGCAGAATATGATAGAGATGCTATTGGGGAACATAGAGATGAAGCTGCACTCTTTGACCCCTGAAATCAGCGACGAGGACGAAGATCCTTATTCAGTTGAATCGCTGGTGGTTCATGGAGCTCTTGATAGAGGTGGGCAAAGGACTTCCATATCACGAGTGAAAGACTCGCATCTCTTTGCTCCCTCCCTGTCCCCCTTCCGTTCCCGTCAATCTTCAGGCAACATTGGCCGGCACGGGGAGATCCTTAGCGACCATGCAGAAGAATCCCAGCCAAAGGGCTCACTCGATATTGAATCGATACCGATGGCGGCACGATTACGATCAAGCAGCACCGTCCTGCCTTTCATAGAGAGGCGATCGGGGAGCCTCCAGAAGCACGGTGTCGCAAGAGGTGCCATCGGGTCTCTGGTCCTCCGTGACTGGGGCTTCGGGAGGGAGGAGGTGGATGACATGGGGGAGCACCTAGCAAAGTTACTCCGCCCGTTTCACCCTGAAATGGATCTTACTTCGGATTCTGATTAG</cdnaseq>

Protein Sequence

<aaseq>MAEGGDRIGAEGRRGDVTGRRGDAEEAEGGDRIGAEGRRGDVTGRRGDFCGGGAAISAIEREREGGDPYRHLWELTTARRAVISLQWLKDARGIVISLEDGTLKFVSLSRIANDVPVTGRPFVGMKTQGVSTYQLSEYLIWSVHASEIAGYAAYCVADGTAVCFELTPRLWEKEPGRNRVPYFLCGSLSEEGTTIKIGIALPNSPLSNVPLGTKRATKTCKDVAQLHVIEEGELLTNSEYNCAINPSIRDGQQDEPDEGQETGAIVLAAPSMQENFGTSTSRGSESPEKFEGWLCLIFWNGGSNRLSLELPTEMYKPYGLKLYLSSEVLCVLGPAIHYSVGCVFTVVSFAGVPWFFEFIRSGNVTRSVSKPHGRNLFLQSLVEEGQNPSTSNGASNSQKSVEDKDLIDCLENGVNFWTDYSKVQYHPQSLYELHGSWTDFDKFDNYGSAQEVVSDWSQIEEMNERLRFFVEECDHIQGIQFIVGDSGSFSSVAAQFLENIADDYTNTPVLLYCVRDPMTLGSSRMNQRESIMRALHDAVSFSKLSSFCNLMVPIGPPSLSRSYMSPYLYIQDEKPFHASAVCAAAIHSITAPFRLQRTGPSSDLAHSSGNLDIGELLHILSDQGRQNMIEMLLGNIEMKLHSLTPEISDEDEDPYSVESLVVHGALDRGGQRTSISRVKDSHLFAPSLSPFRSRQSSGNIGRHGEILSDHAEESQPKGSLDIESIPMAARLRSSSTVLPFIERRSGSLQKHGVARGAIGSLVLRDWGFGREEVDDMGEHLAKLLRPFHPEMDLTSDSD</aaseq>

Gene Sequence

<dnaseqindica>1..197#716..793#1374..1546#1709..1755#1844..2063#2133..2290#2817..2959#3227..3289#3967..4318#4462..4714#5128..5327#5459..5579#5972..6009#6065..6418#ATGGCGGAGGGCGGAGACCGGATCGGCGCGGAGGGGAGGCGCGGCGACGTGACGGGGAGGCGCGGCGATGCGGAGGAGGCGGAGGGCGGAGACCGGATCGGCGCGGAGGGGAGACGCGGCGATGTGACGGGGAGGCGCGGCGATTTCTGCGGAGGAGGCGCGGCGATTTCGGCGATCGAAAGAGAGAGAGAGGGGGGGTGCGGGAGGGGATGAGGAGCGACACGCGCGATGATTGCGGCGAGCTGCGAGCGCGAGAGAGAGAAGGGGGTGCGGGCGCATCTGGGACGTTGGATCCTCATTCTTCAGAAGGTTTTGGACCGTTAGATGTGTGATATGATGAATGATGAATGAGTAAATTATTTGTTTAACTATAGGCTAGATTTGTTTCTGTTTGTTTCCTAATGGTAAAAATTCCGAGTTAACAAACAAAAGATAGGCACGATATGCAGAATATGTTATTATCATATGGACCAATGATGTCAGCAGGAGTTTCTTTATGAATCCAGTGCGATATACGGTTTTTTTTCTTTAGCTTTTCAATGGGCACTAAGAAACTTGTTCTAGAAGCTGCAGTGTGTTTGGCTATGGATATACTGATTGTTATGGTTAAATCACTACCTGTCACAGCCCCCTTGGATTTGCTGTTGTTTTCTACCGTTTTTGTTTTGTAATATTTGGGAATTTTAGTGCATCTCATAAGATATCTTTGCTGCAGAGATCCATATCGCCATCTTTGGGAGTTAACTACTGCTCGAAGGGCCGTAATAAGTCTTCAATGGTTGAAGGATGCAAGGTAATATTTGTTAAGCACTAAATGTACTTGTTTTTTTTTTCACTACAGAAGATTTTTCATCACTAACACGGTGTTTACGTTGTTTTCCTTGTCTTTGAAACACTGCACTAATTTTAAATGGAGATGTATGTTTTCATTAATGTTGGAACACATACTAGAAACCAAATTTGCTAGAATGTTGACAATTGTTTTAGTCATGTAATTTATGTTCATAGGGCCTGTACTTCTCTGTTAGTGTGTGCTAAGGTGGATATTGTCTTTGTTTATATAATTTGTTCCATTAAAGCATCAGCGTATTTTTTTAAGTAATTCTATTTGCACTTTTTTTTTTGCAAACGCTCTATTTGCACTTGTTTACGTAATTATTAATATAAATGTTTGTATTTGCCCACGTACCTTCTAAATATGCAAGCTTCCTTCACTGGACATGGTCTTGATGTGTTACTGGATCAAAGTAGACGTGATTAAATAGACCACATTGTTTCATTCATGGTGATATTGTGTGTATATATGCCAGACATACCCTTTTGTTTACAAGAATGGTAATGTTAACTGTTATATTTTTTATCTTTGTGTTCAGAGGTATTGTCATATCATTGGAAGATGGCACGTTAAAGTTCGTTAGCTTGTCGAGAATCGCAAATGATGTTCCTGTTACTGGAAGGCCATTTGTTGGAATGAAAACTCAGGGTGTTTCTACCTATCAATTGTCTGAATATTTGATCTGGAGTGTCCATGCCTCAGAAATTGCAGGTGCATTTCACCTCATGTCCAACCATAGTATATCTATGTCAAGTATCGGAATATCGGTTATAGCCTTATATCAATATTTAGTTCCACACATGTGAGCAGAGTAAAAATGTCAAATATTCATGATAATTCATGAATTTGTAATTTTGTTTTGCTGATATCCAGGCTATGCGGCTTATTGTGTGGCTGATGGAACTGCTGTTTGCTTTGAGGTAAACTAAACAGCACATATACTATTGATTTATGCATGCTATTGTGATTCTCTATAACATTGCTAAAGAAATATTCAACTTACTGTAGCTTACTCCGAGATTGTGGGAAAAGGAACCTGGGAGGAACCGTGTACCATATTTTCTTTGTGGTTCATTATCAGAGGAGGGAACAACCATTAAAATTGGTATTGCATTACCAAACTCTCCTTTGTCAAATGTTCCTCTGGGGACCAAACGGGCTACTAAAACTTGCAAAGATGTAGCTCAATTGCATGTTATAGAAGAAGGGGAACTTCTTACCAACTCAGGTAATCTCTGTCACCTGCAACTTGTATCATTTTGCTTGTACCTGACATGCCTGCTTAACCACCATACAGAATACAATTGTGCTATAAATCCAAGCATCAGAGATGGTCAACAAGATGAACCTGATGAAGGACAAGAAACTGGTGCCATAGTTTTAGCTGCTCCTTCAATGCAAGAGAATTTTGGCACAAGCACCAGCAGGGGTAGCGAATCCCCTGAAAAATTTGAGGTCTTTCCTCCTAAAGCTGTAGCATTGCATCGGTTGAGATGGAACATGAATAAAGGTAGCGAGAAATGGTTGTGCTATGGAGGTGCTGCAGGCATTATCCGGTGTCAGAGGATCTAAGGAACAAGAGCACACTTGAGGAATCTCCTTGCATATCAGGAAAATCTGCATGTGTCCATCTACACAATAAACTGTTGCATGCTGTGGTATGTTTCATCCGTTTCTTTCCTCTACTGTTATTTTGATCACCGTGTCCATTTTGGGTTATATGTATTAACTTCTTGCACTGTGCTTGCAATATACTCCCTCCATTCCATAATATAAGGCACAACCACTTTTTTTAGATGTTCCATAATATAAGGCATCCATGCATGTAGGCCATTAACTATGACCATTTCTCCATTAAATTATTACTTTTTTAAATCCTCCATTATCATGTTCTATAATTCTATTGGATGCATGCATTGTATTTATTATAATGATCCAAACTACAAGATGATAATAATTATTTTCTTGGTCTTTGGATTAGGGATGGTTATGCCTTATATTTTGGAATGGAGGGAGTAACAGATTATCTTTGGAACTCCCGACAGAGATGTATAAGCCTTATGGACTGAAGCTTTACCTGAGCAGCGAGGTTCTCTGTGTTTTGGGACCAGCAATTCATTACAGGTTGGTTTGAAAATAGAAAATACTGTCACTCCATGCGATTCTTCCTCGACATTAGTCTGAAATAAGTGTAATAAGTGCCTTTGGTGATCCAGATTCGCAAAATCTGTTGTAATTGTAATTGATAGCTACTAGCATACAATGCTTGATTTCACCAGGGTGTACCCACATACTGCCCTCGTCTGGTATCGGTTGGTTCTCGAGGTAATCTGACTGTGAATTTGATCCAATTATTGTAGTGTGTAACAACTGTTATTTTGTTACTGATAGTGTAGGCTGCGTGTTCACGGTGGTATCATTTGCAGGGGTCCCTTGGTTCTTTGAGTTCATCCGGTAATCTCTGTCAGACCAGTGCTTCTGCAGATCAGCTCAATGTTGCTACATGGCAAGTGGTGCTCTAACTTCTCCAGAATATGCTTCCATGTTTGGTTTTGCTTATTGTGCCCACCATGCATAAATGATCGTTGTAATTTGGCATGTACAAGCTACGCAGAAGAATACTGTTGTTTCAGTTTAGTATCGGATTGCTTGTGCAAATGGGTTACAGAGTTAAATAAGCTTTTTTAGGTATCTACAGCTGGGGGATAATTCTGACAAATGGAGGAAGCATGTCTGCATTGTCAAAGAAAGCAGATAGCAAATATAGCAGCTTTGCTCTAGCAATGTTTGATTGATACAGTTCTAGGAAATTTCTGCAGCCTGAGAAAGCAATGAGCTGCTCTTAGGCTGATAATAAGGGAGCGATGGACTGGTAGTAACGATGCATATACCCATCCAGCTTCTGTGGAAGTGATGCATTGCATTTGCCTATTATTTTCGTAGAGTTGCATTCATCTTTTGGCCTGCTGTTGCTTGTTATGTGCTGCTGTCATTCATGCTATCAGTAACTATATGCTAATATCATCGACGAGAATAGGGCTAACTCTTGTATTCCTGTTAGGGGCACCTATATGTTGAATAATGTGTTGGGCTCATATATTACCATGATGATTTTTTCCTGGTTTATATAGGTCTGGAAATGTAACAAGATCAGTCTCAAAACCTCATGGGCGGAACTTGTTTCTGCAAAGCTTAGTTGAAGAAGGGCAGAATCCAAGCACTAGCAATGGTGCCAGCAACTCCCAGAAAAGTGTTGAAGATAAGGACCTGATCGACTGTCTAGAGAATGGCGTCAACTTTTGGACGGATTATTCAAAAGTTCAGTATCATCCTCAGAGTTTATATGAGTTACATGGGTCATGGACAGACTTTGACAAGTTTGATAACTATGGCAGTGCACAAGAGGTTGTTTCAGACTGGTCGCAAATAGAGGAAATGAATGAGAGGCTAAGGTTCTTTGTTGAAGAATGCGACCATATTCAGGTCCAACTTTTCCCCAGTAAATTATCAGCAAACTCTACTATAGTTTTGCAACAAGCTAATGTTCACTTATGCACATCATTTTCGATATCATGCATATTTTGAGACCATTATTTTTAGCTTAATTGATTCATAATTTACCACAGGGCATCCAGTTTATTGTGGGTGATTCAGGAAGTTTTTCCAGTGTAGCTGCACAGTTTTTGGAGAACATTGCTGATGATTACACAAATACACCTGTATTGCTTTACTGTGTGAGGGATCCAATGACCCTTGGATCATCCAGGATGAATCAAAGGGAGTCCATTATGAGAGCTCTTCATGATGCTGTTTCATTTTCAAAACTTTCGTCCTTTTGCAACCTGATGGTCCCCATAGGACCGCCTTCATTAAGTAGAAGTATGCCCTCTGCCTGAACTCCACGATTTTAGTTTATTTTTTTATTCTTTTTTGAAAACTTTCCATTCGAACACTTTTAGGTCTGAGGAGTTCTCGTAAGTTGGCTAAATACACAGGAGGATACTAAATTGCGATGCTATTGTTATTCTGTGATTTTATAGGACTTCTTTCCGGTGGCCTAGTTTTGCCTTTGATTGCTTTCATGTATACTGATCTTGTGCCTTAAGATACTGCACTTGATTGCGTTTCCATTAAGAGAGAATCAACTCCTTTTGTTCATGCTGTATATTCACATTTGATTTCCATACAAAATTACTTTCATGAATTCCCTTAAAAAATACTTTCGTGAATGTACAGAAAGCTTATTCCGAATGAGATTTTCTCACAAATTTCCTTTCACTCTGTTTCATCAGGTTACATGTCACCGTATCTTTATATACAAGACGAGAAACCATTCCATGCTAGTGCTGTTTGTGCTGCAGCAATACATTCAATTACTGCTCCATTTAGATTGCAACGAACGGGCCCGAGTTCAGACTTAGCACATTCATCTGGTAATCTTGACATTGGTGAACTTCTGCACATTTTATCTGATCAAGGTCGGCAGAATATGGTTATTGCTCTGGATGTAGCGATGCCTGCCCCTTCTTTGACAGGTACACAACATAACATATGCCCTACTGTTATACCAACATTGGATGGAAATTTAATCTTGCTTGCTAATTGCACACATCTAATTTGCAGATAGAGATGCTATTGGGGAACATAGAGATGAAGCTGCACTCTTTGACCCCTGAAATCAGCGACGAGGACGAAGATCCTTATTCAGTTGAATCGCTGGTGGTTCATGGAGCTCTTGATAGAGGTCTGCACATCTTATCTTTTGCCGTAGGGTCTGATTAAGGCTGTGTTCGGTACTGGAGGATGGGAACCTATCTCCTCCGCATGGAAAACGGAGTGGTCCATTAGCGCGTGATTAATTAAGTATTAGCTATTTTTTTTTTCAAAAATGAATCAATATGATTTTTTAAGCAACTTTCGTATAGAAACTTTTTGCAAAAAACGAACCGTTTAGCAGTTTGAAAAGCATGCGCGCGGAAAACTAGATGGGGAAGTTTTGTCATGCCAACAGAACTTATTTTTCTACTGTTATATTGTACAATATTGAACATTTCACAACATTATAGGCATGGTGGCTAAATTTTGGTTATACATGTAGAAATACAAAGAATTAACAATTGAAATTTGTTTGCACAGGTGGGCAAAGGACTTCCATATCACGAGTGAAAGACTCGGTATGTTCAGTCTACGAAGCCAGAGAGACAAAGCCAAAATTTTCCCATCTCTCAGCATCTCTTTGCTCCCTCCCTGTCCCCCTTCCGTTCCCGTCAATCTTCAGGCAACATTGGCCGGCACGGGGAGATCCTTAGCGACCATGCAGAAGAATCCCAGCCAAAGGGCTCACTCGATATTGAATCGATACCGATGGCGGCACGATTACGATCAAGCAGCACCGTCCTGCCTTTCATAGAGAGGCGATCGGGGAGCCTCCAGAAGCACGGTGTCGCAAGAGGTGCCATCGGGTCTCTGGTCCTCCGTGACTGGGGCTTCGGGAGGGAGGAGGTGGATGACATGGGGGAGCACCTAGCAAAGTTACTCCGCCCGTTTCACCCTGAAATGGATCTTACTTCGGATTCTGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017012