BGIOSGA017041

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Revision as of 04:38, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017041| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017041, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017041

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017041, complete gene.

LocusTag

OSJNBA0093F12.13

Ensembl Transcript ID

BGIOSGA017041-TA

Ensembl Protein ID

BGIOSGA017041-PA

Length

2667

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29013318..29015984

Sequence Coding Region

29013318..29013431,29013545..29014229,29014346..29014450,29014505..29015850,29015931..29015984

Genome Context

<gbrowseImage1> name=IndicaChromosome04:29013318..29015984 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:29013318..29015984 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTTCCACGCGCTCCCCCGCCGCGACCTGCAGGCGCTGTGCAAGCGCAACGGCGTCCGCGCCAACATGACCAACGCCGCCATGGCCGATGCCCTCGCCAAGCTCGCCACGGTTGATGGGATCGAGGAGTTCGCCAAGCAGGCAGTCGCCCTGCCACCGGCGCCGGCAACCAAGCCGGCGGTTAAGGCGGTGGCGGAGGAGGATCCGCGCGAGAAGAAGGGGAGCCCGCTCCCGCGCGGCCGCCGCGTCACGGTCAGCTCGCCGGAGGTGGTCAACCTGGACGACAGCGACGAGGAGGCTCCGGGGCAGAGTAAGGACGCCCCTCTCCCCCGTGGCCGCCGCGGCACGGTCAGGTCGTCGAAGTTCATCAGGCCGGACGACGGCGAGGAGGAGGGCAAGGAGGACGAAAATCGGGGCGAGAACGCGCCTGTGCATGGCGAGGGGCGGCGCGGTGCCAGCAGGCGCGCCCGGGCCGAGCCCGTGGTCGCTCCAACTACGAGGAGAAGGGCCGCTCCCACTAGTAAGATCGAGACAGGTGATGTGGCTGTGGAAGCGCCACCGGCTCCGACCACTCGCCGGAGGCCGCAGACTAGTACGGAGGCTGCACCGGCACCAACCACTCGCCGGAGGGCCCAGAGTACTGTAGCAGCATCTGCAGAGGAGAAGGTGCCGAGGGGTAGACGGACGACGAGGAGAGCAGCGGCGAAGAAGCCCGATATGCTGGAGGAAGAAACCAGAGAACCTCTTGCGCCTGAGCAAAATAGCGCACACGAGGAGCCAGTGCAGGAAGAGCAAGGAATTGAAGTGGAGGTGCCTGCAGAAACTGTCGAGGCAGTAGCTCAGGAATGCTTGCCTGACCCTGATGCATTAGTTGAAGAGAAGCCGGTGCAGGAAGAGGAAGTTGGGAGGTCTGACTTGAGTGTGCCTGTTCGATTGGTAAATTCAGGGATAGAGGTGGAAGAACCTGCAGAAACTGTCGAGGCAGTAGCTCAGGAATGCTCACCTGATGCAGTTGTAGAAGATGAGCAGGCAGCTGTCGAAGCTGAACAGACTATCAGCCAGGATGATTCGCCCATTTTTGGCATTGTGACTGGGACAATTGTTGGAGCGAGTGAGGAAGCCCCTGTGTGCAACAGTGAGTGTCCCAAGAACATGGCGACTGAAGAGAGTTCCGACACAGTTAGTGAAGAGAAGGAAGCCGTGCCTGCTGATGAGGTGCCGCTGGTTACGGTGACATGCGGCGAAGCAACTAGGGATGCTGAATTGCCCACCAATATTGGCAATGCCAAAGAAGAGGATGATGATGAAATGGAGGCTGCGCATGAGGCTGGTTTTGCGGTTGAAGTGGACGGATCTGAGACTGTTGATGAGCTGATTGGTACACTGACAGAGCATGCTGACAATGCCATTCAGCTTAATTTCTCAGCAGAGCTCAGTTGTGCTGATGAAGAGGCGGGAGTATTTGCCACCGATGATCTGCAGCAGAGCTCAGCGACTGTGAAGACTATGGTGGCAGACAGCGAGGCCAACGAGGAAGAGGATGCACTGGAAGCAGAAAATGAGGTCGGTTTTGCGGTTGAGGAGAAGGAAGTTAGGACAGGCGATGAGCCGCATGAAACAGTGTCAAATGATGCTGACGGTGCCATTCAGCTTGGGGAGGATGCACTGGAAGCAGCAAATGAGGCCGGTTGTGCAGTTGAGGAGAAGGGAGTTGAGACAGTTGACGAGCCACATGATACAGAGACAAATGCTGCTGAAAATGCTCAAGAGGAGGGAGTTGTGGCCAGTGAGGATCTGCTGCAGATTTCAGAGACCGAGCAAGAAGAATTCAACTCGGATATTTGCCATGCCGTTGAACACAATGAAAGGGACAATGTAGAAAGTGTGTCATCAGAGAGGGAGGATGTCAGTATGGAGAATGCGTTCACCGGTGACCTCACAATGAAGTTCGACGGTCCTGGAGACTTGGGTGATCGCAATACCTCTCTTTTGGAAGAGGGAGCTCGGACCTTGCCACTATCTACTGAAACGCCCAACAATGTCACTGATGCGGTGGTCACAGCTGCCGAGGAAATGGTGTCTGAAACCATGGGTGTCAGTAATAAGAAGAGTACTGAACTAGCTGCAATGGAAGACGGCAACGAAGTGAAGGTTGTGGAGAAGCAGAAGGAGGATCCTGTGGAACTAGTTAAACTTAGCCTAAGGACTCTTAGAGCCAAGCTCAAGGAGAAGCTGACTAAGCACAAGCGTAAGGAAGCAAAAAGGGTGGCCTTGGGCAGGTTGGACGAGAATGTTTGTTGA</cdnaseq>

Protein Sequence

<aaseq>MDFHALPRRDLQALCKRNGVRANMTNAAMADALAKLATVDGIEEFAKQAVALPPAPATKPAVKAVAEEDPREKKGSPLPRGRRVTVSSPEVVNLDDSDEEAPGQSKDAPLPRGRRGTVRSSKFIRPDDGEEEGKEDENRGENAPVHGEGRRGASRRARAEPVVAPTTRRRAAPTSKIETGDVAVEAPPAPTTRRRPQTSTEAAPAPTTRRRAQSTVAASAEEKVPRGRRTTRRAAAKKPDMLEEETREPLAPEQNSAHEEPVQEEQGIEVEVPAETVEAVAQECLPDPDALVEEKPVQEEEVGRSDLSVPVRLVNSGIEVEEPAETVEAVAQECSPDAVVEDEQAAVEAEQTISQDDSPIFGIVTGTIVGASEEAPVCNSECPKNMATEESSDTVSEEKEAVPADEVPLVTVTCGEATRDAELPTNIGNAKEEDDDEMEAAHEAGFAVEVDGSETVDELIGTLTEHADNAIQLNFSAELSCADEEAGVFATDDLQQSSATVKTMVADSEANEEEDALEAENEVGFAVEEKEVRTGDEPHETVSNDADGAIQLGEDALEAANEAGCAVEEKGVETVDEPHDTETNAAENAQEEGVVASEDLLQISETEQEEFNSDICHAVEHNERDNVESVSSEREDVSMENAFTGDLTMKFDGPGDLGDRNTSLLEEGARTLPLSTETPNNVTDAVVTAAEEMVSETMGVSNKKSTELAAMEDGNEVKVVEKQKEDPVELVKLSLRTLRAKLKEKLTKHKRKEAKRVALGRLDENVC</aaseq>

Gene Sequence

<dnaseqindica>1..114#228..912#1029..1133#1188..2533#2614..2667#ATGGACTTCCACGCGCTCCCCCGCCGCGACCTGCAGGCGCTGTGCAAGCGCAACGGCGTCCGCGCCAACATGACCAACGCCGCCATGGCCGATGCCCTCGCCAAGCTCGCCACGGTAAGCCCCGTCAACTGTTCGACCGGCCGTCGCTTCAGTCGCCCATTGCCGTCCTGGATTTTGTTTGGTGCGGGATGCTCATGTGCTACCTCGCCGGGCCCTTCGCGTTCCAGGTTGATGGGATCGAGGAGTTCGCCAAGCAGGCAGTCGCCCTGCCACCGGCGCCGGCAACCAAGCCGGCGGTTAAGGCGGTGGCGGAGGAGGATCCGCGCGAGAAGAAGGGGAGCCCGCTCCCGCGCGGCCGCCGCGTCACGGTCAGCTCGCCGGAGGTGGTCAACCTGGACGACAGCGACGAGGAGGCTCCGGGGCAGAGTAAGGACGCCCCTCTCCCCCGTGGCCGCCGCGGCACGGTCAGGTCGTCGAAGTTCATCAGGCCGGACGACGGCGAGGAGGAGGGCAAGGAGGACGAAAATCGGGGCGAGAACGCGCCTGTGCATGGCGAGGGGCGGCGCGGTGCCAGCAGGCGCGCCCGGGCCGAGCCCGTGGTCGCTCCAACTACGAGGAGAAGGGCCGCTCCCACTAGTAAGATCGAGACAGGTGATGTGGCTGTGGAAGCGCCACCGGCTCCGACCACTCGCCGGAGGCCGCAGACTAGTACGGAGGCTGCACCGGCACCAACCACTCGCCGGAGGGCCCAGAGTACTGTAGCAGCATCTGCAGAGGAGAAGGTGCCGAGGGGTAGACGGACGACGAGGAGAGCAGCGGCGAAGAAGCCCGATATGCTGGAGGAAGAAACCAGAGAACCTCTTGCGCCTGAGCAAAATAGCGCACACGAGGAGCCAGTGCAGGAAGAGCAAGGTGAAATCTCAATTCTATCAACCATTTCGCTCGAAACTTGTAATAGATCCATTTCATTATTATGTAGTTTTGAGGTCTGAATTTAGTGTGCATGTTGTTCAATTGGGGAAATTCAGGAATTGAAGTGGAGGTGCCTGCAGAAACTGTCGAGGCAGTAGCTCAGGAATGCTTGCCTGACCCTGATGCATTAGTTGAAGAGAAGCCGGTGCAGGAAGAGGAAGGTGAGATCTCCGTTCTGTTAACGATTTCACTAGCTCCATTTCATTCTTCTTTAGTTGGGAGGTCTGACTTGAGTGTGCCTGTTCGATTGGTAAATTCAGGGATAGAGGTGGAAGAACCTGCAGAAACTGTCGAGGCAGTAGCTCAGGAATGCTCACCTGATGCAGTTGTAGAAGATGAGCAGGCAGCTGTCGAAGCTGAACAGACTATCAGCCAGGATGATTCGCCCATTTTTGGCATTGTGACTGGGACAATTGTTGGAGCGAGTGAGGAAGCCCCTGTGTGCAACAGTGAGTGTCCCAAGAACATGGCGACTGAAGAGAGTTCCGACACAGTTAGTGAAGAGAAGGAAGCCGTGCCTGCTGATGAGGTGCCGCTGGTTACGGTGACATGCGGCGAAGCAACTAGGGATGCTGAATTGCCCACCAATATTGGCAATGCCAAAGAAGAGGATGATGATGAAATGGAGGCTGCGCATGAGGCTGGTTTTGCGGTTGAAGTGGACGGATCTGAGACTGTTGATGAGCTGATTGGTACACTGACAGAGCATGCTGACAATGCCATTCAGCTTAATTTCTCAGCAGAGCTCAGTTGTGCTGATGAAGAGGCGGGAGTATTTGCCACCGATGATCTGCAGCAGAGCTCAGCGACTGTGAAGACTATGGTGGCAGACAGCGAGGCCAACGAGGAAGAGGATGCACTGGAAGCAGAAAATGAGGTCGGTTTTGCGGTTGAGGAGAAGGAAGTTAGGACAGGCGATGAGCCGCATGAAACAGTGTCAAATGATGCTGACGGTGCCATTCAGCTTGGGGAGGATGCACTGGAAGCAGCAAATGAGGCCGGTTGTGCAGTTGAGGAGAAGGGAGTTGAGACAGTTGACGAGCCACATGATACAGAGACAAATGCTGCTGAAAATGCTCAAGAGGAGGGAGTTGTGGCCAGTGAGGATCTGCTGCAGATTTCAGAGACCGAGCAAGAAGAATTCAACTCGGATATTTGCCATGCCGTTGAACACAATGAAAGGGACAATGTAGAAAGTGTGTCATCAGAGAGGGAGGATGTCAGTATGGAGAATGCGTTCACCGGTGACCTCACAATGAAGTTCGACGGTCCTGGAGACTTGGGTGATCGCAATACCTCTCTTTTGGAAGAGGGAGCTCGGACCTTGCCACTATCTACTGAAACGCCCAACAATGTCACTGATGCGGTGGTCACAGCTGCCGAGGAAATGGTGTCTGAAACCATGGGTGTCAGTAATAAGAAGAGTACTGAACTAGCTGCAATGGAAGACGGCAACGAAGTGAAGGTTGTGGAGAAGCAGAAGGAGGATCCTGTGGAACTAGTTAAACTTAGCCTAAGGACTCTTAGAGCCAAGCTCAAGGAGAAGCTGACTAAGCACAAGGTAATGACACCTGACCTTATTTATGCACTGTAGACTATTTATCATATAATGCTGAGTACTAAGACGGCTCTGTAATGCAGCGTAAGGAAGCAAAAAGGGTGGCCTTGGGCAGGTTGGACGAGAATGTTTGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017041