BGIOSGA017048

From RiceWiki
Revision as of 04:38, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017048| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017048, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017048

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017048, complete gene.

LocusTag

OSJNBA0083N12.6

Ensembl Transcript ID

BGIOSGA017048-TA

Ensembl Protein ID

BGIOSGA017048-PA

Length

2831

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29135610..29138440

Sequence Coding Region

29135610..29135861,29136266..29136331,29136514..29136694,29136802..29136998,29137157..29137207
,29137289..29137380,29137491..29137558,29137824..29137909,29138029..29138133
,29138303..29138440

Genome Context

<gbrowseImage1> name=IndicaChromosome04:29135610..29138440 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:29135610..29138440 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCTGCGGCGGCGCGGCTGTTGGAGAGGGCGACGAGAACCGCGGCATCCTGCTCCTCCGCTCTTCTCCGCAGTCCTCTGGATTCTTTCTCCGGACGCTTCCCAAGCTTCCGGTCGCCCCTCCTACGGCCGGCTCCGGCGCCGTCGACCGTCTTCCCCCGGGGCCTCTCCGACACGGCCTTCGACGCGCAGGCACTGGACACCCGCGTACCCGCCACCGTCATCACCGGCTTCCTCGGCTCCGGCAAGACAACCCTCCTGAATCACATTTTAACTTCACAGCATGGGAAGAGAATCGCTGTAATTGAGAACGAGTTTGGTGAGGTGGACATTGATAGCTCACTCGTTGCAAGTCATTCATCAGTTGCCGAGGACATTGTAATGGTGAACAATGGTTGCTTGTGTTGTACTGTCCGAGGGGATCTTGTAAAGATGCTTCTGAAGTTGGTAAAGCAAAAGGGGGACAAGTTTGATCATATTGTTATTGAAACAACAGGTCTTGCAAAGCCTGGTCCTGTCATTGAGACATTCTGTTCTGATGAACTGGTCTCTAGATATGTGAAGCTTGATGGTGTGGTTACTATGGTTGATTGTAAGCATGCCATGAAACATTTGAATGAAGTAAAGGCCAGGTGGGTTGTAAATGAGGCTGTAGAGCAAGTTGCTTATGCAGACAGGATTATATTGAACAAGACTGATTTGGTTGATAATGCAGAACTGGAGGTGTTAATTAACAAAATTAAGCTCATAAATGGGATGGCACAGATGAGAAAAACAAAGTTTGGTGATGTTGACATGGATTTTGTGCTAGGAATTGGGGGCTATGATCTTGATAGGATTGAGTCTGAAGTCCAGTTGCATGAAAGAAAAGAGACAGGTCATTGCCATGCTGGAGAAGAACATGGGCATCAGCACCATCATGGACATGTCCATGATTCAGCTGTCTCAAGTGTTAGCATTGTTTCGGAGGGAGTACTTGATCTTGATGAGGTGAATGACTGGCTTGAGAGACTCGTTGAAGAGAAAGGGGAGGATCTTTATAGATTGAAGGGTGTAATCTCCGTAAATGAGTCAACTGGACGTTTCGTATTCCAGGGTGTGCACTCTATGTTGGAGGGATGCCCAGCTAAACCATGGGAGCCGGATGAGAAAAGATTCAACAAATTAGTATTTATTGGAAGGAATTTGGATGAAGCTGCACTGCGAAAAGCCTTCAAAGGCTGCTTACTGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAAARLLERATRTAASCSSALLRSPLDSFSGRFPSFRSPLLRPAPAPSTVFPRGLSDTAFDAQALDTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDSSLVASHSSVAEDIVMVNNGCLCCTVRGDLVKMLLKLVKQKGDKFDHIVIETTGLAKPGPVIETFCSDELVSRYVKLDGVVTMVDCKHAMKHLNEVKARWVVNEAVEQVAYADRIILNKTDLVDNAELEVLINKIKLINGMAQMRKTKFGDVDMDFVLGIGGYDLDRIESEVQLHERKETGHCHAGEEHGHQHHHGHVHDSAVSSVSIVSEGVLDLDEVNDWLERLVEEKGEDLYRLKGVISVNESTGRFVFQGVHSMLEGCPAKPWEPDEKRFNKLVFIGRNLDEAALRKAFKGCLL</aaseq>

Gene Sequence

<dnaseqindica>1..252#657..722#905..1085#1193..1389#1548..1598#1680..1771#1882..1949#2215..2300#2420..2524#2694..2831#ATGGCGGCTGCGGCGGCGCGGCTGTTGGAGAGGGCGACGAGAACCGCGGCATCCTGCTCCTCCGCTCTTCTCCGCAGTCCTCTGGATTCTTTCTCCGGACGCTTCCCAAGCTTCCGGTCGCCCCTCCTACGGCCGGCTCCGGCGCCGTCGACCGTCTTCCCCCGGGGCCTCTCCGACACGGCCTTCGACGCGCAGGCACTGGACACCCGCGTACCCGCCACCGTCATCACCGGCTTCCTCGGCTCCGGCAAGGTGACCGCTGCTGTCCTTCCCCTTGTGCAGTCTTGCTAGCTTTTTTTAGATAATGGAAGCTTTATTTAGACTCAGTTAATTACATCAAGATGATACAATCAAACTGAGTCACCCCCGGCCTCTGCATAAAATGCACACAGCCAAAAAGCGCTGGAGCCATATAGACAGTGTACTTGAGAGGCGCTTGCGGCGATCCAAACTTGACGGGGTAATTTGAACTAGAATCCAAGAACTTGATATATCTGTAAAAATCAAATTAAAACCAGTCTGGATTTTTGCACTATATGGGGCTTGCTTCCATGGTTCCGGAGTGTTAAATAGTAACATACATGATGATACAGTTTATAGGAAACTTATGCTTGTGTGGTATAGTTGGCTAATTGTTTCGAATTTACCTTTTACAGACAACCCTCCTGAATCACATTTTAACTTCACAGCATGGGAAGAGAATCGCTGTAATTGAGAACGAGGTAATTCTAAGCAGCCATATATCTTGCGGACTTGTCAAAATTGCATTGTTCAGTTATGTGCAACAGAATCTTCAGATCAGGCTGACCATTGTTTACTTGATATTCTGTTTTCCAATATATCCATATTTACATTCAATTAGCTTGGTGACTAGTGACCACATACTGACTCAGTTATTTCTTAGTTTGGTGAGGTGGACATTGATAGCTCACTCGTTGCAAGTCATTCATCAGTTGCCGAGGACATTGTAATGGTGAACAATGGTTGCTTGTGTTGTACTGTCCGAGGGGATCTTGTAAAGATGCTTCTGAAGTTGGTAAAGCAAAAGGGGGACAAGTTTGATCATATTGTTATTGAAACAACAGGTGGGCCTCACTGGATTGTATTGCTAAAGTATGGAATTGGAAATGCCTCCTTTTCTTGAAGGTCCATGATTTTTCAATGCCTGACAGAGTCAATGCCATTAACCCAGGTCTTGCAAAGCCTGGTCCTGTCATTGAGACATTCTGTTCTGATGAACTGGTCTCTAGATATGTGAAGCTTGATGGTGTGGTTACTATGGTTGATTGTAAGCATGCCATGAAACATTTGAATGAAGTAAAGGCCAGGTGGGTTGTAAATGAGGCTGTAGAGCAAGTTGCTTATGCAGACAGGATTATATTGAACAAGGTATTTACTGCCTACTAATACATGACTCAGTAGTCAGTACTATAAGTTCTTAAAAAAAGGAATACAATTTTATCTTTTCTGCATTCTTCCGGCTTAAAAAAAAAACTTCTCAAAAAGTTTCTTGTTTTACTAATGTTCCGTAACATACATTTCTGCAGACTGATTTGGTTGATAATGCAGAACTGGAGGTGTTAATTAACAAAATTAAGGTAAATTGATAGAGCGGATTCCTTAAGAAACAAAAATATAAGCTGATGGATTTTTGTACAAGCTGATTCCTTTTTGTGCAGCTCATAAATGGGATGGCACAGATGAGAAAAACAAAGTTTGGTGATGTTGACATGGATTTTGTGCTAGGAATTGGGGGCTATGATCTTGATAGGTTGGTTATGCATGGGAACATTTTTTGGAGGGTATTGAAGAAAAAAATTGGTTTTGACCCTGAGTTAGATATATATCTTGCTTCTCTAATTTGAGATAGGTAATGTACAGGATTGAGTCTGAAGTCCAGTTGCATGAAAGAAAAGAGACAGGTCATTGCCATGCTGGAGAAGAACATGGTAAAGTTTGCTTTCATATCCTTGATCACCATGCCATGGTTCCCAATCATATTAGAATCATGTGAATTATACCTAGGAGTCTAGGACACCATGCAAGAGTTAATGGCAATAAAACATTCTTATTAAGAAATGACGGTAATACCTGAAAAAATGAGATAGCAGCCAGATCCTTACCACAGATAGTCTGTGTCCATGTTTTCTTTTACCTGCTTCTACTGTCAATTCAGTCAGATTACTATTTAGTTTGTACTCTACTGATTTGTAGGGCATCAGCACCATCATGGACATGTCCATGATTCAGCTGTCTCAAGTGTTAGCATTGTTTCGGAGGGAGTACTTGATCTTGATGAGGTAAACCAAAGCACTTGGAACATCTGTTTAAAATATGATTATTCAGCAGGGATTTTTGTTCTTTGCTGCTAGAAGTATACTCAGCAAATCAACTGATCTATCACTACTGTCTTTATCAGGTGAATGACTGGCTTGAGAGACTCGTTGAAGAGAAAGGGGAGGATCTTTATAGATTGAAGGGTGTAATCTCCGTAAATGAGTCAACTGGACGTTTCGTATTCCAGGTTAGCTGATCTAATAGCTTTTGTATTCCAACATTGGTGTGATCTATCACTACCTTTGTTTATCCATTGTTGGTACAGAGAGCTCTTGTTTTAATGCTTTTGCAATTCAATCTACTCTAATTCTGTCTTCTTCCATTACTAACCCTTTCTTAAAATCTAAAACTTACAGGGTGTGCACTCTATGTTGGAGGGATGCCCAGCTAAACCATGGGAGCCGGATGAGAAAAGATTCAACAAATTAGTATTTATTGGAAGGAATTTGGATGAAGCTGCACTGCGAAAAGCCTTCAAAGGCTGCTTACTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017048