BGIOSGA017090

From RiceWiki
Revision as of 04:39, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017090| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017090, complete gene.| tag = OSIGBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017090

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017090, complete gene.

LocusTag

OSIGBA0152L12.9

Ensembl Transcript ID

BGIOSGA017090-TA

Ensembl Protein ID

BGIOSGA017090-PA

Length

3406

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29835709..29839114

Sequence Coding Region

29835709..29836266,29837095..29837170,29837534..29837628,29837770..29837853,29838135..29838222
,29838526..29838650,29838728..29838826,29839040..29839114

Genome Context

<gbrowseImage1> name=IndicaChromosome04:29835709..29839114 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:29835709..29839114 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCCTCTCTCCTCACCACCCCGTCCCAGGCCCTGGCCCTCGCCCCCGGCGCCGCCGCCAGCCGCGTCGGCGGCGGCGGCGGCGGGTCGGCGCGGGTGAGCTTCCCGTCCGGCCGCGTCCAGCGCCGAGGCGCGCTGGGGATGCGGGTGCGGGCGTCGGTGGCGATCGAGAAGGAGACGCCCGAGAGCGAGCCGCCGCCGACGTTCCTGCGGGAGGACGGGTCCGGGGCGGGGTCCGGGTCGGTGCGGGAGCGGTTCGAGGCCATGATCCGCCGCGTGCAGGGGGAGGTGTGCGCGGCGCTGGAGGAGGCCGACGGGAGCGGCGCCCGGTTCGTGGAGGACGTGTGGTCGCGCCCCGGCGGCGGCGGGGGCATCAGCCGGGTGCTCCAGGACGGCCGCGTGTTCGAGAAGGCCGGGGTCAACGTCTCCGTCGTGTACGGCGTCATGCCCCCCGACGCGTACCGCGCCGCCAAGGGGGAGGCCGGCAAGAACGGCGCGGCGGCAGATGGCCCCAAGGCTGGGCCCGTGCCCTTCTTTGCCGCTGGCATTAGCTCGGTTCTTCACCCCAAGAACCCATTTGCTCCAACATTGCATTTTAACTACCGCTATTTTGAGACAGATGCACCGAAAGATGCTCCTGGTGCACCAAGGCAATGGTGGTTTGGAGGTGGTACTGATTTGACTCCTTCATATATCATTGAAGAGGATGTGAAGCATTTCCATTCTGTTCAAAAACAAGCGTGTGATAAGTTTGACCCAAGTTTTTACCCGAGATTCAAAAAATGGTGTGATGATTATTTCTATATTAAGCACCGTAATGAGCGTCGGGGGCTTGGTGGAATATTTTTTGATGATCTTAATGACTATGATCAAGAAATGCTTCTCAACTTTGCTACAGAATGTGCGGATTCTGTTGTTCCTGCATACATACCAATCATTGAACGCCGGAAGGACACTCCATTTACTGAGGAACACAAGGCATGGCAACAACTGAGGAGAGGTCGCTATGTGGAGTTCAACCTTGTATATGATCGCGGTACCACATTTGGCCTCAAGACTGGGGGGAGGATTGAGAGTATTCTGGTTTCTCTTCCACTGACTGCACGATGGCAGTATGATCATACACCTGAAGAGGGAACTGAAGAACGGAAACTTCTTGACGCGTGCATAAACCCAAAGGAATGGCTCGATCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAPSLLTTPSQALALAPGAAASRVGGGGGGSARVSFPSGRVQRRGALGMRVRASVAIEKETPESEPPPTFLREDGSGAGSGSVRERFEAMIRRVQGEVCAALEEADGSGARFVEDVWSRPGGGGGISRVLQDGRVFEKAGVNVSVVYGVMPPDAYRAAKGEAGKNGAAADGPKAGPVPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPSYIIEEDVKHFHSVQKQACDKFDPSFYPRFKKWCDDYFYIKHRNERRGLGGIFFDDLNDYDQEMLLNFATECADSVVPAYIPIIERRKDTPFTEEHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWQYDHTPEEGTEERKLLDACINPKEWLDL</aaseq>

Gene Sequence

<dnaseqindica>1..558#1387..1462#1826..1920#2062..2145#2427..2514#2818..2942#3020..3118#3332..3406#ATGGCGCCCTCTCTCCTCACCACCCCGTCCCAGGCCCTGGCCCTCGCCCCCGGCGCCGCCGCCAGCCGCGTCGGCGGCGGCGGCGGCGGGTCGGCGCGGGTGAGCTTCCCGTCCGGCCGCGTCCAGCGCCGAGGCGCGCTGGGGATGCGGGTGCGGGCGTCGGTGGCGATCGAGAAGGAGACGCCCGAGAGCGAGCCGCCGCCGACGTTCCTGCGGGAGGACGGGTCCGGGGCGGGGTCCGGGTCGGTGCGGGAGCGGTTCGAGGCCATGATCCGCCGCGTGCAGGGGGAGGTGTGCGCGGCGCTGGAGGAGGCCGACGGGAGCGGCGCCCGGTTCGTGGAGGACGTGTGGTCGCGCCCCGGCGGCGGCGGGGGCATCAGCCGGGTGCTCCAGGACGGCCGCGTGTTCGAGAAGGCCGGGGTCAACGTCTCCGTCGTGTACGGCGTCATGCCCCCCGACGCGTACCGCGCCGCCAAGGGGGAGGCCGGCAAGAACGGCGCGGCGGCAGATGGCCCCAAGGCTGGGCCCGTGCCCTTCTTTGCCGCTGGCATTAGCTCGGTAAGGCACAATTACTGGTTCATTTTGAGTGAGAATTTTAGGTGATTTTGCAGTTCTAGTCATTGCATTGCCGTCAGAGATTTGGATTTCTTAGCATCAGGGGTAGTACACTACACTACGATTCCATTCTTCAGCTTTGTTGGCATCCGAGATTCCGAGTGCAAGTGAACTGTTTAGGTGGTCAGTAAAATTTGGGAGTCTTTACATCGCAGTTGTGTGAATGATTTGGCTATTGTGGGTGTTTACTGTTCACAATGTCCATTTTTAAACTTCCATGTGCTGTTTGACAATAACAAACGGTTGTTGAGAAGGAAGTGTTTGCTAGATTAGTGTTTGCTTTTCTGTTTGAAATGTAGTGATGTCATTGCTATCTTATTGTGAGAACTTGAAATGCATAACTTTGAATTTGGATATGTAGTTAAGCATTTGAATGATGAATTTAGATGAGCCCGATATTCTATCGTCTTCCTGTATATTCTCATAAGAGACTAGGAATTCTCATATATCGGAAAATTATGTTTTTAAGAAATTTGGAACATGCTGCATTTTGTTAGATGCTTCAGCTTCAGCCATCATTTGAAGAACTGCGGTGACCATGTTTGCCATGCCTGTGCAATATTTCCTACTGTCTCTTGTATCCCAAGCACTGGTGACTGGTCCACTGTCTTGTGCTACTGTTTATGTGCTACTAATTGGACCAGTAGAGTTATAAAGAGCTAGATCTTTAGCCAAACTTTGTATTTTTGTTCCACGATTAAACACACTCACTTACTCTTGTTTCAACATATCATACCTTTCCAGTAATGGAATTATTCCTTTTATCTGCAGGTTCTTCACCCCAAGAACCCATTTGCTCCAACATTGCATTTTAACTACCGCTATTTTGAGACAGATGCACCGAAAGGTATTTGTGCGAACAATATACACTGCATAATTTTAGTTTCATCAAGTGTAGGTCAATCTTAGCAATTTTTATGATTACTTTCTTTTTCCGCCTGCAGTTGATATGTTCTCTGTTCTATCCTCTTTAAATCTTTTGTTTAGATATACATGTGAATGAAGCTAGATTTTTTTTTTGAAAAAAAAACTGGATATCTGTATGAGACATAGAGCAATTCTATTTACAGTAATGAGTAAATATAAAACTCTTAACATTCTCCTATATATTACGATTAATTTACATTTGGTTGGCCATTTAAACCACCTTTATTATCAGGAACTGCGAATCTCATCATGCAGATTATTAATTCATAATGCTCTACTGCAGATGCTCCTGGTGCACCAAGGCAATGGTGGTTTGGAGGTGGTACTGATTTGACTCCTTCATATATCATTGAAGAGGATGTGAAGCATTTCCATTCTGTATGTAACAGTTCCTGCACATTTCAAAGCCATATGTCCTAGACTCCTAGGATCAAGAGTTTTATTTCCCTCACGTAGCCAAAACACTGTTATTTGCTACTTCGTATACATGGAACTCATTTAATTTTTATGCCTTTTCAGGTTCAAAAACAAGCGTGTGATAAGTTTGACCCAAGTTTTTACCCGAGATTCAAAAAATGGTGTGATGATTATTTCTATATTAAGGTACATTCAGTTTCTTATTGCGTGCTATAGCAATTAAGAAAGGTTCTTTAATCTCTGCATATGCTGCCTTTATTTGGACACTTCAATTCTACTATTTTTTTACATCATTTTCTTTGATAATTTATCATTGATCTTGTGCCTTCATGGTTTTCACTGTAAATTAGTATTTCTGAAGACAGTTGTTACCTTGTTTGAATAATTGGAACTTTGGATGAAGCAACCATTTTTTCCCTACATTTTGTTCCCTGTGTTGAATATTCATGGTTTGTCCTTCAATGCAGCACCGTAATGAGCGTCGGGGGCTTGGTGGAATATTTTTTGATGATCTTAATGACTATGATCAAGAAATGCTTCTCAACTTTGCTACAGGTAAAAGTCCTTACTAGAATGACCACACAAACTTAATTTTATGAATTAGCTTGTAGAGATGTGCCGGAACCGGTCTTTCATAAGACAGGGATTTCTGTCAGTTTGTTTCAGGAATTAGTTCAGATAGCAGGGATATATACATGCTCTTCCTCTTTTAGTATCTAATTGTTTGAGCCTTTTTTCAAACCCAAGTGGCACTACTATATTGATGTTGGATGACCCAGTGAACACTGGTTAAAATGGACCCAATGTTTAAGTTTTCGTTCTCTATGTTGACAAACAGATTGTTTTGTCTATCTACAGAATGTGCGGATTCTGTTGTTCCTGCATACATACCAATCATTGAACGCCGGAAGGACACTCCATTTACTGAGGAACACAAGGCATGGCAACAACTGAGGAGAGGTCGCTATGTGGAGTTCAACCTTGTAAGTGATCTTAGATGAACACAGCTAGAGTCTCACTGCAGTATCTGTTTCTGATTCCAGTGTTGCTTCTTGTGAAGGTATATGATCGCGGTACCACATTTGGCCTCAAGACTGGGGGGAGGATTGAGAGTATTCTGGTTTCTCTTCCACTGACTGCACGATGGCAGTATGATCATGTAAGCTAAAATGCTCCTTTGCCTTGCCAATTCAATAAACATCAAAGTATTTCATGCTTTCAGCTTTAAAACAATACAAAATTTAATATCAAATAGTGAGCATATACTGTTGAATATGATATATTCTCGGCAAAGATCATGTTACATGACACATTTTCATCCTCGGGGAGTCAGTCAGGCAGGCAGGTTTCCTAATGTGCCATTTACTTGCAGACACCTGAAGAGGGAACTGAAGAACGGAAACTTCTTGACGCGTGCATAAACCCAAAGGAATGGCTCGATCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017090