BGIOSGA017091

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Revision as of 04:39, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017091| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017091, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017091

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017091, complete gene.

LocusTag

OSJNBA0085I10.15

Ensembl Transcript ID

BGIOSGA017091-TA

Ensembl Protein ID

BGIOSGA017091-PA

Length

5209

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29848278..29853486

Sequence Coding Region

29848278..29848772,29849450..29849754,29850913..29851173,29851258..29851466,29851555..29851848
,29851926..29851966,29852052..29852120,29852229..29852329,29852416..29852500
,29852604..29852702,29852796..29852864,29852974..29853105,29853193..29853287
,29853405..29853486

Genome Context

<gbrowseImage1> name=IndicaChromosome04:29848278..29853486 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:29848278..29853486 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTCACCGACGACGCCTGCTTAACCCGGCGCCGTCACTGCCGCCGCCGCCGGCTGCTGCTCCGGCCGGCTTCCACCACCACCTCCTCGCCGTCGACGACACGCGGCTGCCGCTGCTCGCCGACTACGCGCTGCTGCAGGGCGACGCCGCGGCGGCGCCGGCGTCCGCGGAGTGGAGCGCCGGGAGCGGGTTCACCGGCATCTCCACCGACCCGGCCACCGCCACCACCGCCACGATGGCGTCCACCGCCACGGCGCCGGGATCGGCGTCGAACCTGACGGCGGCGACCGCCGGAGGAGGAGGGAGGGAGACGTGGGTCCGCCGCGCCAGGGAGGGCTACTACCTCCAGCTCTCCCTCGCCATCCGCCTAACCTCCGAGGCCTTCCTCGCCGGCGTCCCGCCCGAGCTCCTCATCGGCTGCGGCGGCGGCGGCGAAGCCGAGAACCACGCCGACGTCGCGGCCGATGCCGCCGCTGTCTCCTACCGGCTCTGGGTGAACGGGTGCTTGTCGTGGGGGGACAAGATCGCGCACGGGTTCTACAACATCCTGGGGGTGGACCCGCACGTGTGGGCGATGTGCAACGCTGCGGCGGAGGACGGCCGGCGGCTGCCGACGCTGGTGGCGCTCCGGGCGGTGGACAGCGGCGAGTCGTCGGTGCTGGAGGTGGTGCTCGTCGACAAGTGCGGCGACCCAGCGCTCGCCGACCTCGAGCGCCGGGCCCTCGACCTCTACCGCGCCGCCGGCGTCTCCCTCGACCTCGTCCGCCACCTCGCCGTCCTCGTCTCCGACCACATGGGGGGCGCGTTGCGGTCGGAGGACGGGGACCTGTTCATGCGGTGGAAGGCGGTGAGCAAGCAGCTGAGGAAGCGGCACAGGTGCGTCGTCGTCCCCATCGGCAGCCTCTCCATCGGCTTCTGCCGCCACCGCGCCATCCTCTTCAAGAGCCTCGCCGACTTCATCGGCCTTCCCTGCCGGATCGCGCAGGGCTGCAAGTACTGCTCCGCGCCGCACCGCTCGTCCTGCCTCGTCAAGATCGACAACGAGAGAAGGTTTGTAAGGGAGTACGTCGTCGACCTCGTCGTTGAGCCGGGAAGACTCAGCAGTCCAGACTCGTCTATCAATGGCCAGTTGCTCTCCTCCGTGCCTTCACCTTTCAAGACCTCATGTACAATGAGTTCTGCAAACTATGCAACACCGGCTGCTTCGTGGAATCGCGCGATATCTGGAGATCGTCGCAACTCGATACTGTCAAATCCTCAGTATTCAGTTGCTAAGTACTGTGTTGCCGAGGAGAAGAGCTCTGTTCAGGTAGCCACCAAAGAAGCCATGCTGCCAAAATGCGGTCAGATCACGCAGAACGGCAACTGCAACAAGAACAGTATGGCAGTGTTCGAAGTGTCGAAGCAGATGAAGGCGATGGAGATCAGTTCTGAGAGTGGCGATAAGGACAACATCTCCAGTGCTACGCCTCTGAAACGGCTGAGCATCGAGCCGTCTTTCTGCGCCGATTGGCTCGAGATTTCATGGGACGAGATCGAGCTAAAGGAACGCGTAGGCGCCGGTTCGTTTGGAACTGTGTATCGTGCTGACTGGCACGGCTCTGATGTTGCAGTGAAGGTGCTTACTGACCAGGATGTCGGCGAAGCTCAACTGAAAGAATTCCTTAGAGAGATTGCAATCATGAAGCGTGTTCGCCATCCGAATGTGGTGTTATTCATGGGTGCAGTGACAAAATGCCCACATTTGTCGATAGTAACAGAGTATCTGCCCAGAGGGAGCCTCTTCCGTCTCATCAACAAGGCATCTGCTGGAGAAATGCTCGATTTAAGGCGTCGTTTGCGCATGGCGTTAGATGTTGCGAAAGGCATCAACTATCTCCATTGCCTGAATCCTCCAATTGTACATTGGGATTTGAAAACGCCAAACATGCTGGTGGACAAGAACTGGTCCGTGAAGGTAGGTGACTTTGGCTTGTCCAGATTTAAGGCGAATACCTTCATATCCTCCAAATCAGTTGCTGGAACACCAGAATGGATGGCACCAGAATTTCTTCGTGGCGAGCCATCAAACGAAAAGTGCGACGTGTACAGCTTTGGAGTGATCTTATGGGAGCTCATGACAATGCAGCAACCATGGAATGGCCTAAGCCCTGCACAAGTAGTAGGAGCAGTTGCATTCCAGAACAGAAGGCTCCCAATTCCACAAGAGACAGTCCCTGAGCTAGCTGCTCTTGTTGAATCCTGCTGGGATGATGATCCAAGGCAGCGACCGTCGTTTTCGAGCATCGTGGACACGCTGAAGAAGTTGCTCAAATCGATGCTTGGTGGCTCATGA</cdnaseq>

Protein Sequence

<aaseq>MPHRRRLLNPAPSLPPPPAAAPAGFHHHLLAVDDTRLPLLADYALLQGDAAAAPASAEWSAGSGFTGISTDPATATTATMASTATAPGSASNLTAATAGGGGRETWVRRAREGYYLQLSLAIRLTSEAFLAGVPPELLIGCGGGGEAENHADVAADAAAVSYRLWVNGCLSWGDKIAHGFYNILGVDPHVWAMCNAAAEDGRRLPTLVALRAVDSGESSVLEVVLVDKCGDPALADLERRALDLYRAAGVSLDLVRHLAVLVSDHMGGALRSEDGDLFMRWKAVSKQLRKRHRCVVVPIGSLSIGFCRHRAILFKSLADFIGLPCRIAQGCKYCSAPHRSSCLVKIDNERRFVREYVVDLVVEPGRLSSPDSSINGQLLSSVPSPFKTSCTMSSANYATPAASWNRAISGDRRNSILSNPQYSVAKYCVAEEKSSVQVATKEAMLPKCGQITQNGNCNKNSMAVFEVSKQMKAMEISSESGDKDNISSATPLKRLSIEPSFCADWLEISWDEIELKERVGAGSFGTVYRADWHGSDVAVKVLTDQDVGEAQLKEFLREIAIMKRVRHPNVVLFMGAVTKCPHLSIVTEYLPRGSLFRLINKASAGEMLDLRRRLRMALDVAKGINYLHCLNPPIVHWDLKTPNMLVDKNWSVKVGDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKCDVYSFGVILWELMTMQQPWNGLSPAQVVGAVAFQNRRLPIPQETVPELAALVESCWDDDPRQRPSFSSIVDTLKKLLKSMLGGS</aaseq>

Gene Sequence

<dnaseqindica>1..495#1173..1477#2636..2896#2981..3189#3278..3571#3649..3689#3775..3843#3952..4052#4139..4223#4327..4425#4519..4587#4697..4828#4916..5010#5128..5209#ATGCCTCACCGACGACGCCTGCTTAACCCGGCGCCGTCACTGCCGCCGCCGCCGGCTGCTGCTCCGGCCGGCTTCCACCACCACCTCCTCGCCGTCGACGACACGCGGCTGCCGCTGCTCGCCGACTACGCGCTGCTGCAGGGCGACGCCGCGGCGGCGCCGGCGTCCGCGGAGTGGAGCGCCGGGAGCGGGTTCACCGGCATCTCCACCGACCCGGCCACCGCCACCACCGCCACGATGGCGTCCACCGCCACGGCGCCGGGATCGGCGTCGAACCTGACGGCGGCGACCGCCGGAGGAGGAGGGAGGGAGACGTGGGTCCGCCGCGCCAGGGAGGGCTACTACCTCCAGCTCTCCCTCGCCATCCGCCTAACCTCCGAGGCCTTCCTCGCCGGCGTCCCGCCCGAGCTCCTCATCGGCTGCGGCGGCGGCGGCGAAGCCGAGAACCACGCCGACGTCGCGGCCGATGCCGCCGCTGTCTCCTACCGGCTCTGGGTGGGTAGTGTACACAGCTCGCCTTTGGTCTTACCGACCTGACACGACATGCCATGCCATAGCTTAGCTCGAGAAAGAGAGACACAAATCCATTTTGAACTTTCTCTTTTTTATGCAAATTTCAAATTTCAAACTTCTTTCTCTCCCTGCCAAAGAAAACAGTTTTTTTCAGCTTCAAGTTTTGCTGGAGATTTCGTCTAAATTCTTTTTAGTCTTCAATTCATTTTGCAGTTAGTTTGTAGCCTCTAGATTGATGTTTTTTTTACTAGTGGGTTGCTTAATTAATCAAAGATTTCCCACTAATTGCGAACTGTGTAGTATGTTGACTCTAATCTATTCCCATTGAAGTCTCCATTCTGATGCATGCTCAGTGGCTGCACATTGTACATATATTATACAATTCAATAAGGGCTTGTATATTGCAAGTTGCAGGGAGTCGTGTAACCTTCTAGCACCTCCCTAATCATGCCCCCTAACCACACTAGTAGTATTTCTGTTTAATTAATCAATCTCTTACTTAGCTTTAACCAATCCATCCTGCAGCAATTAACTACCACTCTCTGTAGCTAACTGCACTGCACTGATAGCTATAAACAGCTTGCTAATTAAACTGTTGCTGAATTGATAGGTGATCCAATGATCTTGTTGATCTTGTGTTGTTGTGTGTGTATGTTCAGGTGAACGGGTGCTTGTCGTGGGGGGACAAGATCGCGCACGGGTTCTACAACATCCTGGGGGTGGACCCGCACGTGTGGGCGATGTGCAACGCTGCGGCGGAGGACGGCCGGCGGCTGCCGACGCTGGTGGCGCTCCGGGCGGTGGACAGCGGCGAGTCGTCGGTGCTGGAGGTGGTGCTCGTCGACAAGTGCGGCGACCCAGCGCTCGCCGACCTCGAGCGCCGGGCCCTCGACCTCTACCGCGCCGCCGGCGTCTCCCTCGACCTCGTCCGCCACCTCGCCGTCCTCGTCTCCGACCACATGGGGTAATCACACACTAACCAATGCAATGTACCCCTTACTGTTGTCTTGGTTTATTTTCTCCGTCCTAAAAGAAACCTGGATTATTTTCTCCGTCCTAAAAGAAACCCACCGACCTATAAGCGAGTTTGTTTTGGGATGGAGGGAGCATTTTACAAGAAATGTTGACCGGATTATCGACGAGAGTTCGTTAGTTTGCGTTTTAGCTTATCAGCCGTAGCTAAAATTTAATTTTAGAGTTGATTTTGATTTTTTTTGTTGTGTTATTTTTCATTATTGGTTTTTAAATTAAAAACATACTGTATATAAAAATTTTCCTCACAAATTATCTTTTAAGTTGTGTTGTTCACCTGTACAACAAACGATGAGTCTGTTCGTTGATAAAAATTAGCGGCGTACTAGCCGCCGTGCTGTGGATGCAACTGCGAATGTGATTCACAGGACTGGGCAAGTCAACAAGCTCGATCGTCCCCGTGAACATGAGCACCGACGAACACGTGAACACAGCTTCATTTTTCAGAAAAATAAGTAAGCTAGATAATCTAGGTACTGTACGGCTGTATAAACGGAGTAGTACGCCCAGGCTTAATTCGCTGCACGTACCTCTGTACTTGTCTGTACCTGTGCAAGTTGCATCTACTATCTGTTTCTTTGCTTAATTGGTCTTTGAAATGTACAGTGTCACCATGCATCTGTACTCTATGGACCACAAGAACTATTAAGGACTATACTTAACAGTCAAGTCTAGTTGCTCTTAGATTTTGTAGACATATGCTTTCTCCGTTTCATATTGTAGCAAGTAGTTTTAGGTTTGTTCCAAGTCAAACCTTGTCTTGAGTTTTACTGAGTTTATTGAAAAAATACTCCAACAACTGAAACATCAAATTAGTTTTATTAAACCCACCGTGAAATGTCTTGGTAGTGTATTTATTTGTTACCGGGTGTATTTTTCTATAAACTCAGTCAAAATTAGAGAAGTTTAACTTAAGATAAAACTAAAATGTCTTACAATATGAAAGAGAAAAACTAAGTTGTGCTTTGCTCGTCAGAACTTGCAGACATGTAGACTCAGATTTCAGTTGCAGGTTCACTTTCAGGCATAGTTGCACCGAACATTCAGCATTGGTCTCTGACGACTTTCAATGGAGTTTGTGTTTGTGCAGGGGCGCGTTGCGGTCGGAGGACGGGGACCTGTTCATGCGGTGGAAGGCGGTGAGCAAGCAGCTGAGGAAGCGGCACAGGTGCGTCGTCGTCCCCATCGGCAGCCTCTCCATCGGCTTCTGCCGCCACCGCGCCATCCTCTTCAAGAGCCTCGCCGACTTCATCGGCCTTCCCTGCCGGATCGCGCAGGGCTGCAAGTACTGCTCCGCGCCGCACCGCTCGTCCTGCCTCGTCAAGATCGACAACGAGAGAAGGTTTGTAAGGTCAGTCTGTCGATCTCCCTCTGAAATGTAGCAGATGTGCTGTTGCATATGACTTGACTGAACTTTGCTGGTTGGTTGGTTCAGGGAGTACGTCGTCGACCTCGTCGTTGAGCCGGGAAGACTCAGCAGTCCAGACTCGTCTATCAATGGCCAGTTGCTCTCCTCCGTGCCTTCACCTTTCAAGACCTCATGTACAATGAGTTCTGCAAACTATGCAACACCGGCTGCTTCGTGGAATCGCGCGATATCTGGAGATCGTCGCAACTCGATACTGTCAAATCCTCAGTATTCAGGTACAGATATACCATTCTTTCTCCACAGCAAATATGTTATTGGAGTATTCTGATTAGCCATTTACAATCTTTCTTGTGCTGCGTACAGTTGCTAAGTACTGTGTTGCCGAGGAGAAGAGCTCTGTTCAGGTAGCCACCAAAGAAGCCATGCTGCCAAAATGCGGTCAGATCACGCAGAACGGCAACTGCAACAAGAACAGTATGGCAGTGTTCGAAGTGTCGAAGCAGATGAAGGCGATGGAGATCAGTTCTGAGAGTGGCGATAAGGACAACATCTCCAGTGCTACGCCTCTGAAACGGCTGAGCATCGAGCCGTCTTTCTGCGCCGATTGGCTCGAGATTTCATGGGACGAGATCGAGCTAAAGGAACGCGTAGGCGCCGGTACTTCTTTACCTTCATGTTTGTTACTGATTTACCTGTATGATGTGAAATCTGATCGCTGCTGAAATGCAATGCAGGTTCGTTTGGAACTGTGTATCGTGCTGACTGGCACGGCTCTGTAAGTATATTGAACTTTTGGCTCATTGTGTAAGCTTGATTCCCTTTGGAGATCATAAACTTGAGGTTGTAGATTTGAAATGTAGGATGTTGCAGTGAAGGTGCTTACTGACCAGGATGTCGGCGAAGCTCAACTGAAAGAATTCCTTAGAGAGGTCTCTGCCCCATTATGCTTTGATTCTTTATAACTTGAACTAACTGTTCCTTTGGATCACAAACCAGTTCCATCTTTCTAACTTGGAAATTGTTTTTAACCACTACAGATTGCAATCATGAAGCGTGTTCGCCATCCGAATGTGGTGTTATTCATGGGTGCAGTGACAAAATGCCCACATTTGTCGATAGTAACAGAGTATCTGCCCAGGTGAACCTCTCCCTCAGTTTCAGTTGACAAAACCTATCAATGATAGTTTGTCCTTCACCAAATAATCTTTCTGATGATGCAAATAGAGGGAGCCTCTTCCGTCTCATCAACAAGGCATCTGCTGGAGAAATGCTCGATTTAAGGCGTCGTTTGCGCATGGCGTTAGATGTTGTATGTATCACAGCTTTTTTCTTCTCTTCTGCATACTGTATGCATCTGAACCGTTACTGGTTTCTCTGAACAATGTATCACCCATGCTTTGTTTGTAATGCAGGCGAAAGGCATCAACTATCTCCATTGCCTGAATCCTCCAATTGTACATTGGGATTTGAAAACGCCAAACATGCTGGTGGACAAGAACTGGTCCGTGAAGGTTGGTTCAAAATTCAACTCCCAAATAGTAACAGCGAGATCGAAAACTTGTTCTACCTTTTTGTTTCTTTACTGTCGTTGATACGAACTTCAGGTAGGTGACTTTGGCTTGTCCAGATTTAAGGCGAATACCTTCATATCCTCCAAATCAGTTGCTGGAACAGTAAGTTTCATATTACCGTCCAAGCTCAAGTAGCAATCTGCCCAGCTCAAGTAGCAATCTGCCATTGAAATTATTGGCTCTGATCATCCATTGTTCCTGAAAACTGCAGCCAGAATGGATGGCACCAGAATTTCTTCGTGGCGAGCCATCAAACGAAAAGTGCGACGTGTACAGCTTTGGAGTGATCTTATGGGAGCTCATGACAATGCAGCAACCATGGAATGGCCTAAGCCCTGCACAAGTATTTATCTCAATCTTCTCTTTATTCTGATCCTGCATTTGTGTACACGGGACTGTGGTTTGTGATTCAGCAGAGCAACCTGTGCAGGTAGTAGGAGCAGTTGCATTCCAGAACAGAAGGCTCCCAATTCCACAAGAGACAGTCCCTGAGCTAGCTGCTCTTGTTGAATCCTGCTGGGATGAGTAAGCACTGTTTGTTTTGAAGAAATTTTTCCATGATTTAGACAAATTTTTGCTTGATTTCATGCTATGTTCAGAACACCAACTTGTCAGCGAGTGATTTTGCTCTCCTTTTTTCAGTGATCCAAGGCAGCGACCGTCGTTTTCGAGCATCGTGGACACGCTGAAGAAGTTGCTCAAATCGATGCTTGGTGGCTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017091