BGIOSGA017145

From RiceWiki
Revision as of 04:40, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017145| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017145, complete gene.| tag = H0714H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017145

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017145, complete gene.

LocusTag

H0714H04.6

Ensembl Transcript ID

BGIOSGA017145-TA

Ensembl Protein ID

BGIOSGA017145-PA

Length

5584

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30537086..30542669

Sequence Coding Region

30537086..30537115,30537913..30538072,30538160..30538822,30539878..30539981,30540776..30540935
,30541023..30541685,30541803..30542247,30542381..30542462,30542610..30542669

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30537086..30542669 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30537086..30542669 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTATGAAAGGATTCACAAGGTTCAGGCTGGTGCACTTTCTCCGACAAAGCTAAGGATGAAGCTTCTGGGAACTCACAATCGTGTGAGGGTCATCAGCAACAGCTCATCACGGACATCACCTTCGAAGAACACTGAACCATCGCAAGCACAGAACAGACTATTAGTTTGTGATGTTCTTGAAGAAGTTTCAGGCAGCTCTGATGGATCCAAATGCTCCTCAGCAATCAACAAAACTGAAGCTTTAGAGAAGGATCCACCATTGGACATCAACAAGGTTGAGGACATGACCAAAAGTTCAGTTCAGCAACCTGCATCAAGCAACTCAAGCATGATACATCCAGTTCGAACCATAGAAGAAGAGAGTAATGACTGTGATAGTGGTATTGACAATGCTAGTACCAGTAGTTTCGAGTTCCATGGAGGAGAGAAAACAGCAGCGCAGAATCCAACATCAGGATATTTCTCGAGACAGACTTCCTCCAAGTGGAATGATGCTGAGAAATGGATTGTTAATAAGCAAAATGTTCAACAAAATATCTCTAAGGGCGCACCACAGAACCAGAGTGCACAGCAGATGAATTCAGCTGCAGGCAGGGGTTTTATTGTGCCCAAAATTTCAAACCGAAACATAATTCCTCGCCCCATGCAGAACATGAAAAGACCGAGTCCAGCTTCTTCCGCTTCTCGAAGCATATTAGAGAGGTTATCTTTTGGTTCACATCAACCAAAGTTGGTTAGGCATGCAGATGTCTGTACAGTTAATAATGCTGGTGTCACCTCAGAGTATCAAACAAAGGCAACCGATAACGGTTCATCAATTGAAATAAGGCCCTACAAAGATCCCAAAGTCCCTCCATCTCACTCTCACCCACCAGAGTACCAGAGAAGCACAGAGACTCAGAGAGGGAGAGAGAGAGGAAGAATGGAGTATGAAAGGATTCACAAGGTTCAGGCTGGTGCACTTTCTCCGACAAAGCTAAGGATGAAGCTTCTGGGAACTCACAATCGTGTGAGGGTCATCAGCAACAGCTCATCACGGACATCACCTTCGAAGAACACTGAACCATCGCAAGCACAGAACAGACTATTAGTTTGTGATGTTCTTGAAGAAGTTTCAGGCAGCTCTGATGGATCCAAATGCTCCTCAGCAATCAACAAAACTGAAGCTTTAGAGAAGGATCCACCATTGGACATCAACAAGGTTGAGGACATGACCAAAAGTTCAGTTCAGCAACCTGCATCAAGCAACTCAAGCATGATACATCCAGTTCGAACCATAGAAGAAGAGAGTAATGACTGTGATAGTGGTATTGACAATGCTAGTACCAGTAGTTTCGAGTTCCATGGAGGAGAGAAAACAGCAGCGCAGAATCCAACATCAGGATATTTCTCGAGACAGACTTCCTCCAAGTGGAATGATGCTGAGAAATGGATTGTTAATAAGCAAAATGTTCAACAAAATATCTCTAAGGGCGCACCACAGAACCAGAGTGCACAGCAGATGAATTCAGCTGCAGGCAGGGGTTTTATTGTGCCCAAAATTTCAAACCGAAACATAATTCCTCGCCCCATGCAGAACATGAAAAGACCGAGTCCAGCTTCTTCCGCTTCTCGAAGCATATTAGAGAGGTTATCTTTTGGTTCACATCAACCAAAGTTGGTTAGGCATGCAGATGTCTGTACAGTTAATAATGCTGGTGTCACCTCAGAGTATCAAACAAAGGCAACCGATAACAGTTCATCAATTGAAATAAGGCCCTACAAAGATCCCAAAGCTATTCCTGCAGTTCATTCGGTGTCCGTGAGAGATGTGGGCACAGAAATGACTCCCATACCGAGTCAGGATCCTTCAAGGACAGGAACTCCACTTGGATCAATGACACCAACTCGTAGCCCAAATTGCTCTATACCATCAACTCCTGTAGGAGGACGGTCAACAGCATCACCAGGAGATGACAACACAGATGATGGACCATATTTCAACAGAAAAGGTGGCACAAATGAAATATCAGACGATGAAATGAGATTGAAGACAAGGAAAGAAATTGCCGCCCTGGGTATACAACTAGGAAAGATGAACATTGCTACATGGGCTAGCAAAGAGGAGCTAGAACTAGTCTCTGCATCCCCAAGCATTGCTGATTTGGAGCGGATGAAGAAAGAATATGCAGCTCGTGCAGCAGCATATGAAGAAGCAGAAAATTTTAAGCATACAGCAAGATTCAAGAAGGAAGAGTTGAAGATTGAAGCATGGGAGAGCCTTCAAAAAGCAAAAATAGAATCTGAAATGAAGAGAATAGAGGAACATGCAGAGAAATTGCGAAGCGAAGCCATGGCGAAGATGGCTGAAAAGCTAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MEYERIHKVQAGALSPTKLRMKLLGTHNRVRVISNSSSRTSPSKNTEPSQAQNRLLVCDVLEEVSGSSDGSKCSSAINKTEALEKDPPLDINKVEDMTKSSVQQPASSNSSMIHPVRTIEEESNDCDSGIDNASTSSFEFHGGEKTAAQNPTSGYFSRQTSSKWNDAEKWIVNKQNVQQNISKGAPQNQSAQQMNSAAGRGFIVPKISNRNIIPRPMQNMKRPSPASSASRSILERLSFGSHQPKLVRHADVCTVNNAGVTSEYQTKATDNGSSIEIRPYKDPKVPPSHSHPPEYQRSTETQRGRERGRMEYERIHKVQAGALSPTKLRMKLLGTHNRVRVISNSSSRTSPSKNTEPSQAQNRLLVCDVLEEVSGSSDGSKCSSAINKTEALEKDPPLDINKVEDMTKSSVQQPASSNSSMIHPVRTIEEESNDCDSGIDNASTSSFEFHGGEKTAAQNPTSGYFSRQTSSKWNDAEKWIVNKQNVQQNISKGAPQNQSAQQMNSAAGRGFIVPKISNRNIIPRPMQNMKRPSPASSASRSILERLSFGSHQPKLVRHADVCTVNNAGVTSEYQTKATDNSSSIEIRPYKDPKAIPAVHSVSVRDVGTEMTPIPSQDPSRTGTPLGSMTPTRSPNCSIPSTPVGGRSTASPGDDNTDDGPYFNRKGGTNEISDDEMRLKTRKEIAALGIQLGKMNIATWASKEELELVSASPSIADLERMKKEYAARAAAYEEAENFKHTARFKKEELKIEAWESLQKAKIESEMKRIEEHAEKLRSEAMAKMAEKLE</aaseq>

Gene Sequence

<dnaseqindica>1..30#828..987#1075..1737#2793..2896#3691..3850#3938..4600#4718..5162#5296..5377#5525..5584#ATGGAGTATGAAAGGATTCACAAGGTTCAGGTATGAGCTCTACCCAAAGCCATTGCAGTAGTTCGTTTTAGCCGAGCTCTTCATTACTGGTTGCTCGATTCCTCCACACTTCATCTTAGTCACTCACAAGTGACTCTTCTTAAATCCCTTAATTGACATTTCCCATTGATTTCGTGAAAGATTTCGTTTTCTTGATATAGTCACTCTTGACTCATTTCTAATTTACTTTCTATTCTTTGTTTCTTCAGAAATTATATTTCGGCATGCCCATTTCGGCTGCACACCATTTAGGAATGTTGTATTTCGATTCAAACTATTGTCTTAAAGTTCTAAGAAGATAGTGTTGAAATAAGACGGCTTGGGTATAAAACGAGAAAAGTATTGAAGGATAGTACATTTTAGGTCAGGAGGGTAATATATGTTCTCACTGAAAGCGAAGCTAACGAAGTTTGTTTCTACAGAAAAAAAAAAAAAAACAACTCTTCACTTAGGTAGTGCAAAACCTCATTCTGAAGAATTTATCGTTGAACACATGCTAAATGGGACTACTTAATTATTCACTTTTGAAAAAAAAAATATCCTTACAAGTTACAAGTTGTTCCAGACCAGAGTAAAAGTAGCAACAAATTGAACCTTCTACTAACTTCTCAGAAATGATTAAAATCTTGGCAGGATACAGGTGTTTTCTGTTAGCGGTTCTAACTTCTAAAGAATTCTACAAGTTCTTTCTGCAATCACCAATTTTAAGTTTAATTTGAGATACAGTACTTTGAATTAATAGAACTTCCATGGAGAAAGACTTACTGGCTGCTTTGTTGTTCCTGTAGGCTGGTGCACTTTCTCCGACAAAGCTAAGGATGAAGCTTCTGGGAACTCACAATCGTGTGAGGGTCATCAGCAACAGCTCATCACGGACATCACCTTCGAAGAACACTGAACCATCGCAAGCACAGAACAGACTATTAGTTTGTGATGTTCTTGAAGAAGGTACAGACATACACATACTCCTAGTTGTTCAGGAACTTACATTTTCCTGATCAAGTCAATCACACAGCTATCTTGCTCTTCTAGCAGTTTCAGGCAGCTCTGATGGATCCAAATGCTCCTCAGCAATCAACAAAACTGAAGCTTTAGAGAAGGATCCACCATTGGACATCAACAAGGTTGAGGACATGACCAAAAGTTCAGTTCAGCAACCTGCATCAAGCAACTCAAGCATGATACATCCAGTTCGAACCATAGAAGAAGAGAGTAATGACTGTGATAGTGGTATTGACAATGCTAGTACCAGTAGTTTCGAGTTCCATGGAGGAGAGAAAACAGCAGCGCAGAATCCAACATCAGGATATTTCTCGAGACAGACTTCCTCCAAGTGGAATGATGCTGAGAAATGGATTGTTAATAAGCAAAATGTTCAACAAAATATCTCTAAGGGCGCACCACAGAACCAGAGTGCACAGCAGATGAATTCAGCTGCAGGCAGGGGTTTTATTGTGCCCAAAATTTCAAACCGAAACATAATTCCTCGCCCCATGCAGAACATGAAAAGACCGAGTCCAGCTTCTTCCGCTTCTCGAAGCATATTAGAGAGGTTATCTTTTGGTTCACATCAACCAAAGTTGGTTAGGCATGCAGATGTCTGTACAGTTAATAATGCTGGTGTCACCTCAGAGTATCAAACAAAGGCAACCGATAACGGTTCATCAATTGAAATAAGGCCCTACAAAGATCCCAAAGGTAACCTTTTCACTTTATAAGTCAGAAATTATCAAAGTATAATGCACTGTGAGCAAATGAACTTTAACTGTTAAATTTGTTTACCTTCAAAACTCTTATAAGAATTATTGCATGCAGCTATTCCTGCAGTTCATTCGGTGTCCGTGAGAGATGTGGGCACAGAAATGACTCCCATACCGAGTCAGGATCCTTCAAGGACAGGAACTCCACTTGGATCAATGACACCAACTCGTAGCCCAAATTGCTCTATACCATCAACTCCTGTAGGAGGACGGTCAACAGCATCACCAGGAGATGACAACACAGATGATGGACCATATTTCAACAGAAAAGGTGGCACAAATGAAATATCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTAGTGAAGAGTGGTGGGTCTGAATGCTTGGATAGGGTTCCAGTCCAGCCTGGGACCTCTGTTTGACCACCCCCAGTTTATACAACCAAAAGGGGAGTGGTAGCATTAGTTTGGAACTTTGGAGTTTGGGGTGTTTAGGGTGCACACATCTCGAGAAATAGCTAGGTTTATTTTACTGTTGTGTTTACTATACTGCCTGTCGTAAAAGGGAACTTTGTGTAATAAAAGGGTCATGTGATTTAACAAAGAGAGATCTGTAAAGACTAAAAAAGAGGATGGGACTATTTTTCTGTCTAGAACAAAAGGTCGTCTATGGTATGTTGGTGCAAGCCCTATTTGTGACTGGGTGAATTTCTACTGTAGTACTTGCAACCTGCTTTGTGTTTACCCATTGATGAATAGGCAAAGCATACTACTATAAATACTTTCTAACAAAGGGTTTTGGAAAGAAAATGCGACTGGCCAGAGAAACTGGCTTGTGGACGACTCATGAGTCATGTCTAAAGAACTTACCTAAATGACACGACCTGACAGCGTGCTAACAGATCTCTCTTCTTATTAGCTAGTATGCCAGTCCAAATGCTCTAGTGTTCAGTGTTCTCTTCTCCCCCTCACTCTCTCCTGTCTCACTCCCCCCTCCTTCCCCAGTCCCTCCATCTCACTCTCACCCACCAGAGTACCAGAGAAGCACAGAGACTCAGAGAGGGAGAGAGAGAGGAAGAATGGAGTATGAAAGGATTCACAAGGTTCAGGTATGAGCTCTACCCAAAGCCATTGCAGTAGTTCGTTTTAGCCGAGCTCTTCATTACTGGTTGCTCGATTCCTCCACACTTCATTTTAGTCACTCACAAGTGACTCTTCTTAAATCCCTTAATTGACATTTCCCATTGATTTCGTGAAAGATTTCGTTTTCTTGATATAGTCACTCTTGACTCATTTCTAATTTACTTTCTATTCTTTGTTTCTTCAGAAATTATATTTCGGCATGCCCATTTCGGCTGCACACCATTTAGGAATGTTGTATTTCGATTCAAACTATTGTCTTAAAGTTCTAAGAAGATAGTGTTGAAATAAGACGGCTTGGGTATAAAATGAGAAAAGTATTGAAGGATAGTACATTTTAGGTCAGGAGGGTAATATATGTTCTCACTGAAAGCGAAGCTAACGAAGTTTGTTTCTACAGAAAAAAAAAAAACAACTCTTCACTTAGGTAGTGCAAAACCTCATTCTGAAGAATTTATCGTTGAATACATGCTAAATGGGACTACTTAATTATTCACTTTTGAAAAAAAAAATATCCTTACAAGTTACAAGTTGTTCCAGACCAGAGTAAAAGTAGCAACAAATTGAACCTTCTACTAACTTCTCAGAAATGATTAAAATCTTGGCAGGATACAGGTGTTTTCTGTTAGCGGTTCTAACTTCTAAAGAATTCTACAAGTTCTTTCTGCAATCACCAATTTTAAGTTTAATTTGAGATACAGTACTTTGAATTAATAGAACTTCCATGGAGAAAGACTTACTGGCTGCTTTGTTGTTCCTGTAGGCTGGTGCACTTTCTCCGACAAAGCTAAGGATGAAGCTTCTGGGAACTCACAATCGTGTGAGGGTCATCAGCAACAGCTCATCACGGACATCACCTTCGAAGAACACTGAACCATCGCAAGCACAGAACAGACTATTAGTTTGTGATGTTCTTGAAGAAGGTACAGACATACACATACTCCTAGTTGTTCAGGAACTTACATTTTCCTGATCAAGTCAATCACACAGCTATCTTGCTCTTCTAGCAGTTTCAGGCAGCTCTGATGGATCCAAATGCTCCTCAGCAATCAACAAAACTGAAGCTTTAGAGAAGGATCCACCATTGGACATCAACAAGGTTGAGGACATGACCAAAAGTTCAGTTCAGCAACCTGCATCAAGCAACTCAAGCATGATACATCCAGTTCGAACCATAGAAGAAGAGAGTAATGACTGTGATAGTGGTATTGACAATGCTAGTACCAGTAGTTTCGAGTTCCATGGAGGAGAGAAAACAGCAGCGCAGAATCCAACATCAGGATATTTCTCGAGACAGACTTCCTCCAAGTGGAATGATGCTGAGAAATGGATTGTTAATAAGCAAAATGTTCAACAAAATATCTCTAAGGGCGCACCACAGAACCAGAGTGCACAGCAGATGAATTCAGCTGCAGGCAGGGGTTTTATTGTGCCCAAAATTTCAAACCGAAACATAATTCCTCGCCCCATGCAGAACATGAAAAGACCGAGTCCAGCTTCTTCCGCTTCTCGAAGCATATTAGAGAGGTTATCTTTTGGTTCACATCAACCAAAGTTGGTTAGGCATGCAGATGTCTGTACAGTTAATAATGCTGGTGTCACCTCAGAGTATCAAACAAAGGCAACCGATAACAGTTCATCAATTGAAATAAGGCCCTACAAAGATCCCAAAGGTAACCTTTTCACTTTATAAGTCAGAAATTATCAAAGTATAATGCACTGTGAGCAAATGAACTTTAACTGTTAAATTTGTTTACCTTCAAAACTCTTATAAGAATTATTGCATGCAGCTATTCCTGCAGTTCATTCGGTGTCCGTGAGAGATGTGGGCACAGAAATGACTCCCATACCGAGTCAGGATCCTTCAAGGACAGGAACTCCACTTGGATCAATGACACCAACTCGTAGCCCAAATTGCTCTATACCATCAACTCCTGTAGGAGGACGGTCAACAGCATCACCAGGAGATGACAACACAGATGATGGACCATATTTCAACAGAAAAGGTGGCACAAATGAAATATCAGACGATGAAATGAGATTGAAGACAAGGAAAGAAATTGCCGCCCTGGGTATACAACTAGGAAAGATGAACATTGCTACATGGGCTAGCAAAGAGGAGCTAGAACTAGTCTCTGCATCCCCAAGCATTGCTGATTTGGAGCGGATGAAGAAAGAATATGCAGCTCGTGCAGCAGCATATGAAGAAGCAGAAAATTTTAAGCATACAGCAAGGTATTATTCAACCAGAAAATTACATATATTTCCTATTAGTTTCTTGCACTAATGACTTGCAAAGGGAAATAGATAGAATTGAATATTTTTCACATCGGCTTTGTTCCATTTTATCGAAAACTGTATTTCTCAGATTCAAGAAGGAAGAGTTGAAGATTGAAGCATGGGAGAGCCTTCAAAAAGCAAAAATAGAATCTGAAATGAAGAGAATAGAGGTGCATCCATGCTTTGTATTTTCCTCCTTCGTGTACCTAAATTATTCACACCAACACAATACATTTCTCAAATGTTCAATAATCTTACACGGGTTTTTTACTCTTACAATGCTAGTTGTTTTATTAAAACCCAAGTCATTGTGGCAGGAACATGCAGAGAAATTGCGAAGCGAAGCCATGGCGAAGATGGCTGAAAAGCTAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017145