BGIOSGA017178

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Revision as of 04:41, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017178| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017178, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA017178

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017178, complete gene.

LocusTag

OSJNBB0060E08.6

Ensembl Transcript ID

BGIOSGA017178-TA

Ensembl Protein ID

BGIOSGA017178-PA

Length

3591

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30850388..30853978

Sequence Coding Region

30850388..30850735,30851262..30851721,30853052..30853101,30853184..30853314,30853420..30853516
,30853609..30853800,30853976..30853978

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30850388..30853978 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30850388..30853978 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGCAGCAGCCGCCGTCGCAGCCGCAGCCCGGCATGGGCGGCCCGCCTCCGCCGCCGCAGGGCGCGGCGGGGCAGCCGCCGCAGTGGGGCGCGATCCCGCCGCCGATGCCGCCGCACCAGTACGGCGCGCCGCCGCCCCAGCAGCCGCCGGCGATGTGGGGCCAGCCCCCGCCGCAGGCGCACTACGGGCAGGTGCCCCAGCCCCAGCCGTACTACGCCGCGCCACCGCCGCAGGCGATGCCCGCCCCCGCGGCCGCGGACGAGGTGAAGACGCTCTGGATCGGCGACCTGCAGCCCTGGATGGACGAGAGCTACATCTACAACTGCTTCGCGGCCACCGGGGAGGTTCAATCTGTGAAGCTTATCCGGGACAAACAAAGTGGACAGCTTCAGGGTTATGGCTTTGTTGAGTTTACAAGTCGTGCAGCTGCTGATCGAATTCTTCAGACTTATAATGGACAGATGATGCCGAATGTTGAGATGGTCTTCCGATTGAATTGGGCCAGTGCTGGCGAGAAGCGTGATGATACCCCTGACTACACCATTTTTGTTGGGGATTTGGCTGCAGATGTTACAGACTACCTACTACAAGAGACATTCCGGGTCCATTACCCTTCGGTTAAGGGTGCAAAAGTTGTAACTGACAAAATGACAATGCGTTCAAAGGGTTATGGGTTTGTGAAATTTGGTGATCCTACAGAGCAAGCTCGTGCGATGACTGAAATGAATGGAATGCTTTGTTCTTCCAGACCGATGCGTATTGGTCCAGCGGCAAATAAGAAAACAACAGGGGTTCAGGAGAGAGTACCAAATGCTCAAGGAGCTCAGTCTGAGAATGATCCTAACAATACCACCATATTCGTTGGTGGCCTTGACCCCAACGTCACTGAAGATGTCTTGAAACAAGTTTTCGCTCCTTATGGAGAAGTTGTCCATGTTAAGATTCCTGTTGGGAAAAGATGTGGTTTTGTTCAATATGTTAACAGGCCTTCTGCTGAGCAAGCACTGGCAGTGCTACAAGGGACCTTGATTGGTGGGCAGAATGTTAGACTTTCGTGGGGTCGAAGCCTTTCAAACAAACAGCCTCAGCATGACTCGAATCAGTGGGGTGCTGGTGCTGGTGCTGGTGGTTACTATGGTGGCTATGGACAAGGTTATGAGGCTTATGGTGGGTATGCACAACCTCAGGATCCTAACATGTATGGTTATGGAGCCTATGCTGGTTATCCCAATTACCAACAGCAACAAGTAGCACAGCAGCAGCCGCCGCAGCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MMQQPPSQPQPGMGGPPPPPQGAAGQPPQWGAIPPPMPPHQYGAPPPQQPPAMWGQPPPQAHYGQVPQPQPYYAAPPPQAMPAPAAADEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQTYNGQMMPNVEMVFRLNWASAGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQERVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYYGGYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNYQQQQVAQQQPPQQ</aaseq>

Gene Sequence

<dnaseqindica>1..348#875..1334#2665..2714#2797..2927#3033..3129#3222..3413#3589..3591#ATGATGCAGCAGCCGCCGTCGCAGCCGCAGCCCGGCATGGGCGGCCCGCCTCCGCCGCCGCAGGGCGCGGCGGGGCAGCCGCCGCAGTGGGGCGCGATCCCGCCGCCGATGCCGCCGCACCAGTACGGCGCGCCGCCGCCCCAGCAGCCGCCGGCGATGTGGGGCCAGCCCCCGCCGCAGGCGCACTACGGGCAGGTGCCCCAGCCCCAGCCGTACTACGCCGCGCCACCGCCGCAGGCGATGCCCGCCCCCGCGGCCGCGGACGAGGTGAAGACGCTCTGGATCGGCGACCTGCAGCCCTGGATGGACGAGAGCTACATCTACAACTGCTTCGCGGCCACCGGGGAGGTACGGGTCCTGATCTGTTGCGAGATTTGGTTGCCCGTGATTTTTTTGTTTGTGTGGCTTGTTGCTGATGGAGCTGTACTGTGGTGTATTGCGACTAATTTAGTTCCTGATGCTGTATGTTGTGACTTGTGACTGACTTAGTTCTGACTTCTCAAAAGCTCTAGGCTATGAGTTGTGGGTCTACAATAAAAATAAAATTTCATGCTTCGTCTGATTTATCAGTGATTGTTGAATGTATCTTTTTGGTTTATTAAGATTTTACGAACATGCTACTTTCTTTAGTGAATCGATTACAGAAGGTTTTGTTTGATTTTTTACTTACTGTTTTCACATGGATGCTAAGTTTGCAGACTATATAACATTTGCGTACATTCTAAATGCTATTTATGTGATTCGGTTTTGCTATCAATATACATAAGCCATTGCTCAGATGATAATGGATGAAATGCAACATCTAATATACCCAGATTGTGTCCGCCCATTCATGATTTACCTACCGTATCTAACGTTTTGCATTTACTTGCAGGTTCAATCTGTGAAGCTTATCCGGGACAAACAAAGTGGACAGCTTCAGGGTTATGGCTTTGTTGAGTTTACAAGTCGTGCAGCTGCTGATCGAATTCTTCAGACTTATAATGGACAGATGATGCCGAATGTTGAGATGGTCTTCCGATTGAATTGGGCCAGTGCTGGCGAGAAGCGTGATGATACCCCTGACTACACCATTTTTGTTGGGGATTTGGCTGCAGATGTTACAGACTACCTACTACAAGAGACATTCCGGGTCCATTACCCTTCGGTTAAGGGTGCAAAAGTTGTAACTGACAAAATGACAATGCGTTCAAAGGGTTATGGGTTTGTGAAATTTGGTGATCCTACAGAGCAAGCTCGTGCGATGACTGAAATGAATGGAATGCTTTGTTCTTCCAGACCGATGCGTATTGGTCCAGCGGCAAATAAGAAAACAACAGGGGTTCAGGAGAGAGGTAAATGCTGCTGATCGTATTTCCCATTGACACCTTTTACTTATTAGCTTTTCTTTATTTCTATCTATATGTATGGCTGGCTACTCTGCTTGATGATACCTTTTCCTTTTGATGTTCCGCTTTTACCTTTTCCGGTTTTACTTACTTTTACGGAATAAACCAAAGCTTGTGTGACCCTTTTTCTTCAAGAAGTCATTATTCCTTTGTACAACATTCCCTGTGAATTTGGATCATTTCATGCACTAGAACTAGAAAAATAGTAGACTCATGAAACTCGTGTTATCTGGAAGCAGGAGGTCAACAGGCTCTCTCCGTATTGGAGCCTTGGAACTGATTTGAGCTGTGATGCATTTCTTGTGTAATGCATGGCCTCATTTAGGTCAGTGTAAAACATTTATGTTCTAAATTTGAAGTCTGTTTCTTTTGATTTCTGCCCTCCGAATACTTAAGTCATTTATTCTTCTTGCTATTTCAGATTCTACTTCATTTGTGCACGCATACGTTTACTATACATTTTCTTTCTTTAAAAAGTTTCATGACTCATGCCTGATGTGATATGCACATAGTTAAATTAGCATGTTGGCTCAAGCTTGCTTTTATTTGCTAGGCTTGACTATTGAGGGTCATATCCCTGCTTCATGTATTGAGGCTTGACATTTTAAACATTTTCTATTTCCTTCTTTTTGAAAAAGAGATTTTTGAATGAAAAAAAATGTTAGTACCTTCTGTGAATAAATTATTGTCTTTTTCACGCCTTCTAGTTTTTGTTTTTGTGATATTTTACACTTCGAGTTGCCACACTGTTTATCTGTTCTTTTAAGCATCTGGAGAATATTCTGCTTCTTTTCTCAACATACATTATGATAGGCTTGCAATGTATGTCTCATTTTTTTCTGCCTCTAACTTGACATGGAATCGATTGTTGGGGCTGTATTGCATTCTGTATTGTGTTGTGTATTCAGCTTGTTTGAGATTCTATGTATACAATACTTAAAAAACAGTGTTCTGCTTGCCCTTTGCCTTGATTTGGTAGTCTTATTAGCATTTTTGGCCACTTAACTCCATTATAAGTCTGTTAAGTGAAATCTTGTCTACATGGTTTTGATGAACATGTTCCTGAATTGCTGAGCTATCTTAGTTACTCTATTCTAAATTGTCTTCAGTGGTGCTTGATATTCTGCTTAATGCATATGGCTTGACATGGCTGGATCTATATGAATATCACTGCTTATGCTTGTGAACGAGACATTTGCATGATAAGCATTCATGTTTACCAGCATTTGACAAATCTTACATTGTATTTTCTTCACTTTTTTGCTTTCATTTACAGTACCAAATGCTCAAGGAGCTCAGTCTGAGAATGATCCTAACAATACCACCGTGCGTTCTTAGTTCTATTTTTCCTGTACAACAGTAATTTCTTTTCAGTTCATTTAGTGACTATGTTTGTTGTTGAGCTCAGATATTCGTTGGTGGCCTTGACCCCAACGTCACTGAAGATGTCTTGAAACAAGTTTTCGCTCCTTATGGAGAAGTTGTCCATGTTAAGATTCCTGTTGGGAAAAGATGTGGTTTTGTTCAATATGTTAACAGGTTGACTCTTTGTTCGTTTGTTCTATTTCCACAGATGTCTTACTGCCTTGTAATTTTTTTTTTTGATGAGGTACTTGTAAATTACTCTTGTCATTGCATATTCAGGCCTTCTGCTGAGCAAGCACTGGCAGTGCTACAAGGGACCTTGATTGGTGGGCAGAATGTTAGACTTTCGTGGGGTCGAAGCCTTTCAAACAAACAGGTCCAGATCAAACGCAACATAGTAATTTTCTTATCTATTAAGCTGCATAATGGAGCAAAGTTGATAACATTGTGGTATTTGAATGTCTTCAGCCTCAGCATGACTCGAATCAGTGGGGTGCTGGTGCTGGTGCTGGTGGTTACTATGGTGGCTATGGACAAGGTTATGAGGCTTATGGTGGGTATGCACAACCTCAGGATCCTAACATGTATGGTTATGGAGCCTATGCTGGTTATCCCAATTACCAACAGCAACAAGTAGCACAGCAGCAGCCGCCGCAGCAGGTGAGACTCCCCCTACTTGTTTCCGATATGATCTAACATTGGATTTTTATTTACACTTGTTTACAAATATTGTAACTTTCTTGAAAGTTATCATGAATTCTGCCATGTCAATCTGCGTTTGAATAGCTATAACCTCTAGCGATTAATTCGAAGCATTATTTTTTCTTTCTTCCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017178

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017178&oldid=66072"