BGIOSGA017194

From RiceWiki
Revision as of 04:41, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017194| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017194, complete gene.| tag = OsI_175...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017194

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017194, complete gene.

LocusTag

OsI_17544

Ensembl Transcript ID

BGIOSGA017194-TA

Ensembl Protein ID

BGIOSGA017194-PA

Length

4734

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31059510..31064243

Sequence Coding Region

31059510..31059920,31060053..31060229,31060358..31060482,31060550..31060682,31060787..31060936
,31061026..31061079,31061358..31061453,31061788..31061847,31061943..31062017
,31062648..31062749,31062828..31063514,31063611..31063742,31063841..31063948
,31064094..31064243

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31059510..31064243 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31059510..31064243 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTCGTCAGCACGCGCCGGCGTTCACGCCGGAGGCGGCGTCGGCGTCGGCCACCGGCGGGGCCGGGGAGCGGCAGAGCCTCCCGGCGCTGCAGGCGAAGATGAAGCGCGACCCGGAGGGGTACGAGGAGGAGCTCCGCCAGCTGCGGCGCCACTTCGAGTCATCGGTGTTCCTCTTCCGGCAGCAGGCGGCACTGGCCTCCACGTCCTCGTCCGGCGGCGGAGGGGAGGTGGCCAAGGAGCTCGGCGACCTCGCGCTGTTCCTCGCCCACGTCGCGCCCTTCTACCCGGACGACCTCGCTGACTTGCCCGACCAGATTGGTGGCCTGCTTGACACCAACGCGCGCGCGCTGGCGTCCGGGCTCCGTGTGCACCTCGTGCAGGCGCTGATACTACTGGTGAATCGGAAGATTGTTGATCTGGAGGACACAATGGAGTTATTTATGGAGCTTCAAGTTATAGGGGACCGGGCTGTCAAAAAACTAGCATTCTCACATATTGTACACAGTATCAGGAGAATGAATCAGACCCACAAGAATGAAGCCAGGAATCGTAAACTGCAAAACATCCTTTTCACATTCCTACAGGGCGAGGAAGAGTCGAGAGCAAAGAGGGCCTTTACTATTCTATGTGATCTTCACCGTCGGAGGGTCTGGTTTGATGACCGCACAGCAAATGCTATATGCAATGCTTGTTTCCATGGTTCTTCTAGAATTATGATAGCCGCTATTTCATTCCTTCTTGGGTATGAAAACGTTGAGCAAGAAGATGATAGTGATGCATCCAGCAGTGAAGATGAAGCTCAAAACCCTCAAATTATTCTTAGTAAAGAGGATATTTACAAGGCAAATCACAAGGGCACTGCTGCTACTAAGAAAAAGAAGAAAGCTAAATTGCAGCGTGTGATTCGTAGTATGAAAAGGCAACAACGTAAATCCACTGAGGACACTGGCTCCAATTATTATTCACCACTGACGTATTTAAAGGATCCTCAGGGTTTTGCTGAGAAGCTCTTCTCTCGGCTCCAGAAATGCAATGAGCGGTTTGAGGTAAGGATGATGATGTTAAAGGTTATAGCGAGGACTATTGGGCTGCATCACTTGGTTTTGTTGAACTTCTATCCATATCTTCAAAGATATGTTCAGCCTCATCAACGAGATGTAACAACTTTACTTGCTGCAGCAGTACAGGCTTGCCATGATATGGTGCCTCCTGATGCAGTTGAACCACTGTTTAAGCAGATAGTAAATCAATTTGTGCATGATCGTTCTCGCCCAGAGTTGATGAATGAAGATCTACTCCAGGACCTTGTTTTATACAAAAAGTCCCATGAAAAAGCTGTTTCCATTGCCGCTCGTTCTCTAATTACTTTATTCCGGGAGATCTGTCCTTCTCTGCTAGTCAAGAAAGATCGTGGGCGTCCTGCTGATCCGAAGGCTCGACCAAAAGCATTCGGCGAAGCAACTATCGCTTCTGATGTGCCTGGAGCTGAGTTGCTAGATGAAGACTTTTCATCAGAAGGGGAAGGCTCAGACGATGAGTCTGATGCTTTTGATTCTAATGATGAGAAAGAGTTGCAATCTGCTCGTGGTACTAAACAAAATTTGGATGGTTCGTCTGAAGCAAACAAGCTTGACACAGATGAAGGTATGAAAGAGGAAGATCAACTATCTGGGGATGAAGATGATACAGAGGAACTAGATGAGGATCAAGACATCTCTGACAATGATAGTGAAGAAAATGATGATGAGCTAGAATGTGACTCTGATATGGATGAGGAGAATGATGTATCTGAATCTGATGATGATGAGGAACTCAGTGAGAAATTGGATGATTCTGATGAAGGCTCTGATCAGGATGATGACAGTGACCAGGATGATAAGTCAAAAAACAGCAGTCGCAAGGCAAATAAGAGAAAGTTGAGTGATTATATAGGGCAACTTAATGCTGCAGATGCAAGCCTTCGAGCTCTGAAGAAGTTGGCAGGAGCCAAGAAGGCTGAAGCTTCGTGCGATGAAGCTGGTAAAATCTTATCTGATGAAGATTTTAAGCGTATTAAGGAGCTAAAGGCAAAAAAAGAAGCAAAACTGGCTCTGGCACAACATGGACTCGGCAAGGGCCATGACACAAAATCAGTAACCTTTAAAATGCCTTCTTCTGATCAGCTTAGTCTGAAACGGGTTGACCCATCCAAGCTTGAGGCTCACATAAAGAGAAAGCTTACGAAAGAGGAGAGATTAGAAATGGTGAAGGCTGGAAGAGAGGATAGAGGAAAATACCAAGCAAGAACAGCTGTGAAACAGAAAAAGACCGGTGGCTTGAGCAATAGGCAGAAACAACACAAGAAGAAAATGCCCCTCGCTGCAAGCAGAGCGAAGGCAGCGCGTTCTCGACAGGAGAAGAAAAAACTGCAAAAGCGCTCGGGAAAGCAATTCAGAGGACGGAAGGCGTGGAAATGA</cdnaseq>

Protein Sequence

<aaseq>MPRQHAPAFTPEAASASATGGAGERQSLPALQAKMKRDPEGYEEELRQLRRHFESSVFLFRQQAALASTSSSGGGGEVAKELGDLALFLAHVAPFYPDDLADLPDQIGGLLDTNARALASGLRVHLVQALILLVNRKIVDLEDTMELFMELQVIGDRAVKKLAFSHIVHSIRRMNQTHKNEARNRKLQNILFTFLQGEEESRAKRAFTILCDLHRRRVWFDDRTANAICNACFHGSSRIMIAAISFLLGYENVEQEDDSDASSSEDEAQNPQIILSKEDIYKANHKGTAATKKKKKAKLQRVIRSMKRQQRKSTEDTGSNYYSPLTYLKDPQGFAEKLFSRLQKCNERFEVRMMMLKVIARTIGLHHLVLLNFYPYLQRYVQPHQRDVTTLLAAAVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPELMNEDLLQDLVLYKKSHEKAVSIAARSLITLFREICPSLLVKKDRGRPADPKARPKAFGEATIASDVPGAELLDEDFSSEGEGSDDESDAFDSNDEKELQSARGTKQNLDGSSEANKLDTDEGMKEEDQLSGDEDDTEELDEDQDISDNDSEENDDELECDSDMDEENDVSESDDDEELSEKLDDSDEGSDQDDDSDQDDKSKNSSRKANKRKLSDYIGQLNAADASLRALKKLAGAKKAEASCDEAGKILSDEDFKRIKELKAKKEAKLALAQHGLGKGHDTKSVTFKMPSSDQLSLKRVDPSKLEAHIKRKLTKEERLEMVKAGREDRGKYQARTAVKQKKTGGLSNRQKQHKKKMPLAASRAKAARSRQEKKKLQKRSGKQFRGRKAWK</aaseq>

Gene Sequence

<dnaseqindica>1..411#544..720#849..973#1041..1173#1278..1427#1517..1570#1849..1944#2279..2338#2434..2508#3139..3240#3319..4005#4102..4233#4332..4439#4585..4734#ATGCCTCGTCAGCACGCGCCGGCGTTCACGCCGGAGGCGGCGTCGGCGTCGGCCACCGGCGGGGCCGGGGAGCGGCAGAGCCTCCCGGCGCTGCAGGCGAAGATGAAGCGCGACCCGGAGGGGTACGAGGAGGAGCTCCGCCAGCTGCGGCGCCACTTCGAGTCATCGGTGTTCCTCTTCCGGCAGCAGGCGGCACTGGCCTCCACGTCCTCGTCCGGCGGCGGAGGGGAGGTGGCCAAGGAGCTCGGCGACCTCGCGCTGTTCCTCGCCCACGTCGCGCCCTTCTACCCGGACGACCTCGCTGACTTGCCCGACCAGATTGGTGGCCTGCTTGACACCAACGCGCGCGCGCTGGCGTCCGGGCTCCGTGTGCACCTCGTGCAGGCGCTGATACTACTGGTGAATCGGAAGGTGACGCCTGTTTAGTTCATCTGTTCATTTCACATTAAGTTATATTTTGTTCAAATCGTGTGGATTGGAACCGGGATTATCGTATGACTGTAGAGTAAATTCTCCTCGTATACATTGCTTTTTGATGTTTAGATTGTTGATCTGGAGGACACAATGGAGTTATTTATGGAGCTTCAAGTTATAGGGGACCGGGCTGTCAAAAAACTAGCATTCTCACATATTGTACACAGTATCAGGAGAATGAATCAGACCCACAAGAATGAAGCCAGGAATCGTAAACTGCAAAACATCCTTTTCACATTCCTACAGGTTTGTGACATACCACTATACCACACTTGCACTGATTAGTATTATCGGGTTTAACATAGTGGCAAGAATACATTCATGATTCTCTTCCTACCTCGTTTAGTTATGCATCTTGCTTCGCTGTTTCCCAGGGCGAGGAAGAGTCGAGAGCAAAGAGGGCCTTTACTATTCTATGTGATCTTCACCGTCGGAGGGTCTGGTTTGATGACCGCACAGCAAATGCTATATGCAATGCTTGTTTCCATGGTTCTTCTAGGTACATACTGCCAGCATCTTTGTGTTTATTAATAGGTGTTGATCTAAAATATATCTTTTACATGAAGAATTATGATAGCCGCTATTTCATTCCTTCTTGGGTATGAAAACGTTGAGCAAGAAGATGATAGTGATGCATCCAGCAGTGAAGATGAAGCTCAAAACCCTCAAATTATTCTTAGTAAAGAGGATATTTACAAGGTTATTTGAATTTTTACCATTATTTCGATTTATAGTGTTTTACATCTTTTTTCTGTTACGTGCCTTCTGATATAATGTATTTTATTGTCATATTACTTTCTCAGGCAAATCACAAGGGCACTGCTGCTACTAAGAAAAAGAAGAAAGCTAAATTGCAGCGTGTGATTCGTAGTATGAAAAGGCAACAACGTAAATCCACTGAGGACACTGGCTCCAATTATTATTCACCACTGACGTATTTAAAGGATCCTCAGGTGGGAAATGGTGTAATCCCATAATTGTTCAGAGTGTTATCATTTACATATTGACTGTTATATTGAAGCTTTCGTTTTTTGGCTGACAGGGTTTTGCTGAGAAGCTCTTCTCTCGGCTCCAGAAATGCAATGAGCGGTTTGAGGTTGGCCCCATTCCTTGTTCTGAAGATTCCTTGTTCTGTAAAGATTTAAAAAGTTATATATAATTGTCAGAACTATCATTACTTAGTACTTTTAGCTTTCTGCTGAAGTTTTATACATGAGTGTATATAGTTGGAACCAGCATTCAAGTAGGAGAATTGGAACCCAGATGTGCAATAGTTTATTTTTTAAACACAATGTCTGTTGTGAGTTCCATCCGATGGTTAAACGAAAATAAACGTTAATTCAAATTTAGAGAATGTTGGTTGGGTGCTTGCAGGTAAGGATGATGATGTTAAAGGTTATAGCGAGGACTATTGGGCTGCATCACTTGGTTTTGTTGAACTTCTATCCATATCTTCAAAGATATGTTCAGGTATGTTCTTAACTTGGCATGTGTTCTTCTTGTAGCAACCTTATGGTAGATATAATGTTTATCTATACTCTATACTAATATAAAAGATGGTAGTGGTGGTGGACCCACGGACTGTGAGTTGCGTATCTCTTAGCCCCCACATGCCATAGATCCCGTCGAAAGGAAAATATGACAATAGAATATTATGAAAATTTTCATCTTTACGAAATGACAGCAAAATTAGCATAATGATAATATAATAGACAATTAGAAAAAAAAAACCGTTGCACCTCACGTGCATTATACTAGTTCATACTAGTTTTGATAATAAGTTTTCTACCTTTCTGTGATGCAGCCTCATCAACGAGATGTAACAACTTTACTTGCTGCAGCAGTACAGGCTTGCCATGATATGGTTGAAACACTTTTGCTCTTCTCCTATATTTCACTACTTATATCATTTCTTTTGCTTTGTCCAAATTCAGCTAAATTAATATGCTTCAATTTTAGGTGCCTCCTGATGCAGTTGAACCACTGTTTAAGCAGATAGTAAATCAATTTGTGCATGATCGTTCTCGCCCAGAGGTTTGCATAACACTCATCACATATCTAATATATTTAAGTATTTTCCAACTAACATGGCATATTTCTAACCAATCTCATTTTAGGCTATTGCTGTTGGCTTGAATGTTGTGCGAGAGATCTGCATGAGAATACCTTTGGTACTTACCTTGCTCAAATCTGTACTCTTGCTTTCTAGTGCTACTGACCTCTGACCAGACACCCCTTAAATTTGTGTGATGGATTCATTAAATTTTTATGGTGGTCATGTTTTGTTGTACCTAATTCCTGTGCCCTGGACATGCTCTAGTAGAAATTGTGATTTCATTTTTTTACTAGTCTTAAATGACTGGTTGCGTAGTCCAAACTCCAAAAGGATGTGATAGTCGATTGCTACAGGTTTTAAGCATATAAGTGTAACTTAATGAAGAATTGAAAAGGTATAAACATGGTTTTACCAGGCCACATTTAGTCTTGTGTAGCCTGACACGTTAGTCACTTATGCATGAGAAGTTGAGAACACACATGCAGGTTTGTATACTACATTACCACCTGAGGTACTGTGCGGGTTGTAAGATATTTAGGAAGATATTCTTGGTCTATTTATTTTATTCATCTAGCAGGCCTCTGTTAATCCTTCTGTTATACCTGCAGTTGATGAATGAAGATCTACTCCAGGACCTTGTTTTATACAAAAAGTCCCATGAAAAAGCTGTTTCCATTGCCGCTCGTTCTCTAATTACTTTATTCCGGGAGGTCAGTTCTTATCCTTTTGCATATTCTGTGATTTCTTTTTGTTCACTTCAGCTAAACCTTCTTTTGGTTTGGGTTCAGATCTGTCCTTCTCTGCTAGTCAAGAAAGATCGTGGGCGTCCTGCTGATCCGAAGGCTCGACCAAAAGCATTCGGCGAAGCAACTATCGCTTCTGATGTGCCTGGAGCTGAGTTGCTAGATGAAGACTTTTCATCAGAAGGGGAAGGCTCAGACGATGAGTCTGATGCTTTTGATTCTAATGATGAGAAAGAGTTGCAATCTGCTCGTGGTACTAAACAAAATTTGGATGGTTCGTCTGAAGCAAACAAGCTTGACACAGATGAAGGTATGAAAGAGGAAGATCAACTATCTGGGGATGAAGATGATACAGAGGAACTAGATGAGGATCAAGACATCTCTGACAATGATAGTGAAGAAAATGATGATGAGCTAGAATGTGACTCTGATATGGATGAGGAGAATGATGTATCTGAATCTGATGATGATGAGGAACTCAGTGAGAAATTGGATGATTCTGATGAAGGCTCTGATCAGGATGATGACAGTGACCAGGATGATAAGTCAAAAAACAGCAGTCGCAAGGCAAATAAGAGAAAGTTGAGTGATTATATAGGGCAACTTAATGCTGCAGATGCAAGCCTTCGAGCTCTGAAGAAGTTGGCAGGAGCCAAGAAGGCTGAAGCTTCGTGCGATGAAGCTGGTAAAATCTTATCTGATGAAGATTTTAAGCGTATTAAGGAGCTAAAGGTATGGGAGTTTTTTCCAGCTGTAGTTCATGCTGTGGAGCATTCTTTTGGGAAAGAAAGTGAAGTTGTGTATATCTGACATTGTTATGAGTTTCAGGCAAAAAAAGAAGCAAAACTGGCTCTGGCACAACATGGACTCGGCAAGGGCCATGACACAAAATCAGTAACCTTTAAAATGCCTTCTTCTGATCAGCTTAGTCTGAAACGGGTTGACCCATCCAAGCTTGAGGTGCATTTTCTCTCTTCCCCTCCCGCATTGCACTCGTGCCAGCGCGCTCATGCACACACATCCACACTTTGCTTATATGAACATCTTCCTTTATGTAGGCTCACATAAAGAGAAAGCTTACGAAAGAGGAGAGATTAGAAATGGTGAAGGCTGGAAGAGAGGATAGAGGAAAATACCAAGCAAGAACAGCTGTGAAACAGAAAAAGGTATTCGTTTATATGATCCTCCTTTTTGGTGCTTATTTTGACCTATGTTGGCTATATGGCACACCTTGTGAAATCTGATCATGAATTGTTCTTTCGTAGTTGCTTTTATTCCTTCTCTACTTATATGCTTCTCATTGCGTTTTAGACCGGTGGCTTGAGCAATAGGCAGAAACAACACAAGAAGAAAATGCCCCTCGCTGCAAGCAGAGCGAAGGCAGCGCGTTCTCGACAGGAGAAGAAAAAACTGCAAAAGCGCTCGGGAAAGCAATTCAGAGGACGGAAGGCGTGGAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017194

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017194&oldid=66088"