BGIOSGA017200

From RiceWiki
Revision as of 04:41, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017200| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017200, complete gene.| tag = H0105C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017200

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017200, complete gene.

LocusTag

H0105C05.9

Ensembl Transcript ID

BGIOSGA017200-TA

Ensembl Protein ID

BGIOSGA017200-PA

Length

2225

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31126111..31128335

Sequence Coding Region

31126111..31126484,31126605..31127112,31127221..31127325,31127516..31127581,31127765..31127830
,31127992..31128045,31128189..31128335

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31126111..31128335 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31126111..31128335 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGATCATCAGATGATGCACGCAGCTCCGGCGGCGATGTACAACGGCGGCGGGGGCGGTGGTACGACGAGCTCTCATGGCGTGTGGTGGAGCAACGCGGTGGGGGTACCGGCGGCGGCGACGTGCTCGACGACGACGGAGCTCGCCGGGTACACCGCCTGGTCGTCGGCTCTGGCCGCTGGATACGATGGCATGGTAGCTGACAACGGCGGCAAGCAGGCGAAGAGCACCACCACGGCGTCGTCGGAGTCGCCCGGCAACAACAGCTCGGTGACCTTCCAAGAGCCGGCGAGCATCCCCGACCCGGCCGCCGTCGCCGCCGTGCCGCAGCCGGGGCTCGCCGGCTTCACCGACTGGACCCAGCCTTTCATGAACAACGGTGCTGGTCTGCATGAGTTTCTGCAAGATGGCCACCATGACATGAGCGCGTCGAGCTTGATGAATCACTCATCAAATAACCTAGCACTGCAGCAAGCAGGTCACCACCACGAGCTGCTGTCCAGCTTCGGCTCAGACCTGCTCTTGTCGCCGACGTCGCCGTACGGCGGATTCCAGTCCTCGCTGCTGAGGAGCCTCATGGAGCCGACGGCGAAGCAGCAGCAGCAGCAGCCGGCTTTGGCTGGACTCCAGCAGTATCATCAGTACCAGCAGCAGATGGGACACACACCAGCAGCTGCTGCCAAGTTCGCGCAGGCAGTTGGGGCCAGGGATTCACTCCAGTTCACCAACGACGCGCCGTTCTGGAACCCTTCTGCCGGATTCGGCATGCCGGCGGCTGTGGCGGTGGCGGCGGCGGCGGCGCAAGATCAAGCTAGCGTTCGCTCTGCCAAACGCTCGTCGCCGGCGCCGCCGCGTGCGGCAGCAACCCTTGCATTAAAGACTGCTATGGAAGGAGTAGGGGACTCTAGCTCAGTGATCACCAAGAAGGAGACAGCGTTCAAGAAACCGAGACTCGAGACACCGTCGCCATTGCCGACCTTCAAGGTTAGGAAGGAGAAGCTAGGGGACAGGATCACAGCGCTCCAACAACTAGTCTCTCCTTTTGGAAAGACGGATACCGCATCGGTGCTCCATGAGACCATCGAGTACATCAAGTTCCTGCACGACCAAGTTGGTGCTCTTAGTGCTCCATACTTGAAGAACGGTGCCCATCAAGTGCCCCACTTGAAGAACTCAAGTCCTGACAAGTCCAAGCACGGCGAGATATCACTGAAGGGCCGGGGGCTTTGTCTGGTGCCGATATCGAGCACGTTCGCCGTTGCCAGCGAGGTGCCCGTCGAGCTGTGGACTCCATTTGGTGCCAACTTTATTAGGTAG</cdnaseq>

Protein Sequence

<aaseq>MGDHQMMHAAPAAMYNGGGGGGTTSSHGVWWSNAVGVPAAATCSTTTELAGYTAWSSALAAGYDGMVADNGGKQAKSTTTASSESPGNNSSVTFQEPASIPDPAAVAAVPQPGLAGFTDWTQPFMNNGAGLHEFLQDGHHDMSASSLMNHSSNNLALQQAGHHHELLSSFGSDLLLSPTSPYGGFQSSLLRSLMEPTAKQQQQQPALAGLQQYHQYQQQMGHTPAAAAKFAQAVGARDSLQFTNDAPFWNPSAGFGMPAAVAVAAAAAQDQASVRSAKRSSPAPPRAAATLALKTAMEGVGDSSSVITKKETAFKKPRLETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGALSAPYLKNGAHQVPHLKNSSPDKSKHGEISLKGRGLCLVPISSTFAVASEVPVELWTPFGANFIR</aaseq>

Gene Sequence

<dnaseqindica>1..374#495..1002#1111..1215#1406..1471#1655..1720#1882..1935#2079..2225#ATGGGGGATCATCAGATGATGCACGCAGCTCCGGCGGCGATGTACAACGGCGGCGGGGGCGGTGGTACGACGAGCTCTCATGGCGTGTGGTGGAGCAACGCGGTGGGGGTACCGGCGGCGGCGACGTGCTCGACGACGACGGAGCTCGCCGGGTACACCGCCTGGTCGTCGGCTCTGGCCGCTGGATACGATGGCATGGTAGCTGACAACGGCGGCAAGCAGGCGAAGAGCACCACCACGGCGTCGTCGGAGTCGCCCGGCAACAACAGCTCGGTGACCTTCCAAGAGCCGGCGAGCATCCCCGACCCGGCCGCCGTCGCCGCCGTGCCGCAGCCGGGGCTCGCCGGCTTCACCGACTGGACCCAGCCTTTCATGTGAGTTATATATACAAGCCAATTAATTAACTCGTACTAGCTACCATATCATATGGAGAGCTAGCTTAGCTGAGATCGATCCTGACATGTTTGCATGCGATTTTGTGTACGTTTCATCAGGAACAACGGTGCTGGTCTGCATGAGTTTCTGCAAGATGGCCACCATGACATGAGCGCGTCGAGCTTGATGAATCACTCATCAAATAACCTAGCACTGCAGCAAGCAGGTCACCACCACGAGCTGCTGTCCAGCTTCGGCTCAGACCTGCTCTTGTCGCCGACGTCGCCGTACGGCGGATTCCAGTCCTCGCTGCTGAGGAGCCTCATGGAGCCGACGGCGAAGCAGCAGCAGCAGCAGCCGGCTTTGGCTGGACTCCAGCAGTATCATCAGTACCAGCAGCAGATGGGACACACACCAGCAGCTGCTGCCAAGTTCGCGCAGGCAGTTGGGGCCAGGGATTCACTCCAGTTCACCAACGACGCGCCGTTCTGGAACCCTTCTGCCGGATTCGGCATGCCGGCGGCTGTGGCGGTGGCGGCGGCGGCGGCGCAAGATCAAGCTAGCGTTCGCTCTGCCAAACGCTCGTCGCCGGCGCCGCCGCGTGCGGCAGCAACCCTTGCATTAAAGGTTTGTACATAGATGATGCATGCATACAAGATAGCTAGCTAGTTCTGTCATTAGCTACTTTAATTTTAGGGCATTGTGATTGATGTTTTGTTATGTGTATACGTGTAGACTGCTATGGAAGGAGTAGGGGACTCTAGCTCAGTGATCACCAAGAAGGAGACAGCGTTCAAGAAACCGAGACTCGAGACACCGTCGCCATTGCCGACCTTCAAGGTAGATAGATACTCACAGAGACATAGCTAGCTGCTATGCATCATGAGTTGAACTCAATCTGGTTTAATTAGTATAAAACAGTCTGCATTATTTGATGTCACAATAATATATAGGTCATGCAATTTAAGAGATCGATATAGATGCATCTTTACTAAAGTTGTTCGTATGTGCAAATTGCAATATACTTCAGGTTAGGAAGGAGAAGCTAGGGGACAGGATCACAGCGCTCCAACAACTAGTCTCTCCTTTTGGAAAGGTGAGGGAGGCTTTTGATGGCCAATGTGCACTATATTACAAACAACAAGAGTGCTTGGAACTATGCATCAACATCTTCTGTGCAAAAGAGTTCTTCCTTTTTGATCTCCTCCTCCTTTCGAGATCTATACACTATATGCAAAACAACACAATCTTATTCTCTTCTCGATGTGCGCGCGTGCAGACGGATACCGCATCGGTGCTCCATGAGACCATCGAGTACATCAAGTTCCTGCACGACCAAGTTGGTGTAAGTGTGTGCAAGTACACCATGATTCCCCACCTTTAATTATAGCATCCTGGAGCACGAACTCGCACGTTTCTTCAGATGAATCATGCATCAGAGATTCAGAGAAGAGAGACTGATGATCAGTGTTACCTGAACATTGTCTTGTGTTTTGTTTTCTGCAGGCTCTTAGTGCTCCATACTTGAAGAACGGTGCCCATCAAGTGCCCCACTTGAAGGTATTGCCAGTGTTGGATGCTGCATGCTTGCTCTCCTTTTCAGCATTCTGATCGATCACTGTACTTATGATCGATCTGTGTGTGTCATCTCTGTTCAAGCCAGTGCTGATGATGGCTTCTGCAATTGATTTGTTTCGTTTCAGAACTCAAGTCCTGACAAGTCCAAGCACGGCGAGATATCACTGAAGGGCCGGGGGCTTTGTCTGGTGCCGATATCGAGCACGTTCGCCGTTGCCAGCGAGGTGCCCGTCGAGCTGTGGACTCCATTTGGTGCCAACTTTATTAGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017200