BGIOSGA017229

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Revision as of 04:42, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017229| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017229, complete gene.| tag = OS04G06...")
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Gene Name

BGIOSGA017229

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017229, complete gene.

LocusTag

OS04G0643600

Ensembl Transcript ID

BGIOSGA017229-TA

Ensembl Protein ID

BGIOSGA017229-PA

Length

4820

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31734759..31739578

Sequence Coding Region

31734759..31734817,31735671..31736253,31736394..31736606,31737066..31737355,31738385..31738496
,31738578..31738814,31738898..31739578

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31734759..31739578 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31734759..31739578 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTTGATTCTGCGCACAAAGCTCAATACATCGACGGACAAAGAGAAATGTTTAAGAGATTGGATGAGTCAAGCCCTAGGTCATCTGTACCTTCTGAAGTGGGAGGGAGGAGCACCCTGAAGTTTAGCATGCCTAGTTTTGGTTATGATTCATTTAATCCCGTAAGATCTTTCTTGTCAGGGGTGAGAAAGGGTTCTGGAAGACTTAAATCACTTCGGCAATCACTTACATCTGGTGCTCCTAAGACAGCTTTTGCGGAAGATCTTAAATCTTTTAAGAAGACTATATTTGATCCCCAGGAAAAGTTTCTCTTTCAAATGAATTGGTTTTGCTTCCTATCATGTGTTTTTGCTGTTGCCGTGGATCCACTATTTTTCTTCCTACCCATTATCGACGGCGACGACAAGTCCAGTTGCATTGGTATTGATAAAAAATTGGCAGTGACATCAACAATAATACGGACAATTCTGGATCTGGTCTATCTTATACGTGTATTTCTTCAATTTCGCACTGCTTATGTTGCTCCATCTTCTCGAGTGTTTGGAACTGGTGAGCTTGTGATTGATCCAATGAGGATTGCTATTCGGTACTTAAAGAGTTATTTTGTAATGGACTTCTTTGCTTTGCTACCACTTCCACAGATTGTTGTTTGGAGATATCTCCATACTTTGGATGGTCCAGATGTACCGTCAACAAAAAATGCATTGGTTTGGGTTGTATTGTTTCAATATATTCCAAGGTTGCTACGGATTTTCCCTGTGACCAAAGATTTGAAAAGGACGGCTGGTGTTTTCATTGAAACTGCTTGGCTTGGTGCTGCTTACTATCTTCTATGGTTTATGCTGGCTGGTCATAATGTTGGTACTTTGTGGTATTTTTTGACCATAGAGCGGGAAGATTCTTGCTGGCGCTCGAACTGTCATAGCAATGATGGCTGTAATAAAAGCTACCTGTACTGTAGTGATAATCATACTGGCAACTATACCAGTTGGCTTAGTAAGAGAACAGAACTTCTCAGTGCATGCAGTACTAATTCTTTCCAATTTGGTATTTTTGAACAAGCGCTGGTGTCTGGAATACTTCGTCCAGGAAATTTTATCTCTAAAATCTGCTATTGCTTCTGGTGGGGACTACAAAATCTAAGTACCCTTGGTCAAGGGCTTCAAACAAGCATATATCCTGGAGAGGTGTTATTCTCTATCGCAATATGTGTTATTGGGCTAATTCTTTTTGCTCTCCTCATCGGCAACATGCAGACCTACCTTCAATCAGTTGCTATACGGCTTGAAGAGATGAGAGTTAAGAAACGTGATGCTGAGCAGTGGATGCATCATCGTTCACTGCCTCCTCAAATAAGAGAGCGAGTAAGGAGATATGAACGCTATAGGTGGTTGGAGACCAGAGGAGTAGATGAAGAAAATTTGGTTCAAACCCTTCCAAAAGACCTTCGGAGGGACATTAAGCGCCATCTCTGTTTGGGTTTAGTGAAAAGGGTACCTTTGTTTGAGAATATGGACGAAAGATTGCTGGATGCAATATGTGAGAGGTTAAGGCCTACACTATACACTGAAAATGAATACATTTTGAGAGAAGGCGATCCTGTGGATGAGATGCATTTCATCCTCCATGGCTGCTTGGAGAGTGAGACCACCGATGGGGGCCGAAGTGGATTCTTTAACAAGGTCCAGTTAAAGGAGGGCGCTTTCTGCGGTGATGAGCTGCTCACATGGGCATTGGATCCTAAATCTGCTGCTAACTTCCCAGCTTCAACTAGGACAGTGAAAGCTCTTACTGAGGTTGAGGCATTTGCGTTGTGTGCTGAGGAGCTGAAATTTGTGGCCAGTCAGTTCAGGAGGCTCCACAGTAGGCAAGTTCAGCACACGTTCCGGTTCTATTCCCAGCACTGGAGGACATGGGCGGCCTGTTTCATTCAAGCGGCATGGCGCCGCTATTACAAGAGGAAGATGGCCGAGCAGCATCGCAAGGAAGAAGAGGCTGCAAACCGGCAAAGCAGCAGCAGCCACCACCCTAGCCTCGCAGCAACCATCTACGCATCTCGCTTTGCAGCTAATGCACTCCGAGGAGTTCACAGGCTCAGAAGCAGGGCCAGCCCGACAATTGTGAGATTGCCAAAGCCTCCAGAACCAGATTTTGCCGTCGATGAAGCTGACTAA</cdnaseq>

Protein Sequence

<aaseq>MFDSAHKAQYIDGQREMFKRLDESSPRSSVPSEVGGRSTLKFSMPSFGYDSFNPVRSFLSGVRKGSGRLKSLRQSLTSGAPKTAFAEDLKSFKKTIFDPQEKFLFQMNWFCFLSCVFAVAVDPLFFFLPIIDGDDKSSCIGIDKKLAVTSTIIRTILDLVYLIRVFLQFRTAYVAPSSRVFGTGELVIDPMRIAIRYLKSYFVMDFFALLPLPQIVVWRYLHTLDGPDVPSTKNALVWVVLFQYIPRLLRIFPVTKDLKRTAGVFIETAWLGAAYYLLWFMLAGHNVGTLWYFLTIEREDSCWRSNCHSNDGCNKSYLYCSDNHTGNYTSWLSKRTELLSACSTNSFQFGIFEQALVSGILRPGNFISKICYCFWWGLQNLSTLGQGLQTSIYPGEVLFSIAICVIGLILFALLIGNMQTYLQSVAIRLEEMRVKKRDAEQWMHHRSLPPQIRERVRRYERYRWLETRGVDEENLVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREGDPVDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTRTVKALTEVEAFALCAEELKFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYYKRKMAEQHRKEEEAANRQSSSSHHPSLAATIYASRFAANALRGVHRLRSRASPTIVRLPKPPEPDFAVDEAD</aaseq>

Gene Sequence

<dnaseqindica>1..59#913..1495#1636..1848#2308..2597#3627..3738#3820..4056#4140..4820#ATGTTTGATTCTGCGCACAAAGCTCAATACATCGACGGACAAAGAGAAATGTTTAAGAGGTTCTTTCATTTACCTTAAAAGCAGTTTTCCTATGTTTGAACACCTTATACAAATGTTATCTTGTCACTTTCCAGTAGTTTTTGTCCTTTCTCCTGTATAAAACGGAAATCTTTTGTTGTAAAACTAACTTTGTTACGTCCACAGCATAATCACGAGTGAGCCCAAGCCTCAGCCAAAGAGTCGAACTCGAGCTCCAAATGAGCATGTCTCTACATAACTTTTATTGTTTATTTGATAAATTAGTAGATCAAATACACATTAGTGTGTACCAACAGCAGTTCCGCACAATGAATTAGCATGTATTGGCATCATATTATCTTAGTCCCTTTTCTTCTCTTTTATTAATGTAATTAACTAGAAATCAATTTTGCTTACCAAGAGATTATCCATAAAATATACATTATACTGTTCATGAGCCAAACGCGGTAGCCAAGATTGAAGTCAAGCCAAACGTTTCTACTTGGAAGCTCGAAGATTACATAGGCTCGTTTTGAGCTTGTGTTGAGCTCGAGCCTAGGCAGTCATGCTCGGCTCGTTGACGGCCCTATTATGTGTCTTTGTTTACCATTCTTCGCATACATATTTTCTTAGGTTGTATAGGTAGTACTTCGGTTTTTTGTCAGGGTTGCCTAATCTTGTGTTTCTTGAACAAAAACACCAAATCTAACCTGAGAATTGCCCAGTGCATTTAAGTGCTCCTTTGGTCCTTCCTGCTAGAATGGTTCAGTGTAAAAGGACAGTTTCATGTTTCTATCAAATGTTATATGTTTGACAATTATTACTGTGTGTACAACATTGCTGTTCTTGTTTTACTGTTGTGATTTTCTTAATCATATCCAAATAATTCTGCAGATTGGATGAGTCAAGCCCTAGGTCATCTGTACCTTCTGAAGTGGGAGGGAGGAGCACCCTGAAGTTTAGCATGCCTAGTTTTGGTTATGATTCATTTAATCCCGTAAGATCTTTCTTGTCAGGGGTGAGAAAGGGTTCTGGAAGACTTAAATCACTTCGGCAATCACTTACATCTGGTGCTCCTAAGACAGCTTTTGCGGAAGATCTTAAATCTTTTAAGAAGACTATATTTGATCCCCAGGAAAAGTTTCTCTTTCAAATGAATTGGTTTTGCTTCCTATCATGTGTTTTTGCTGTTGCCGTGGATCCACTATTTTTCTTCCTACCCATTATCGACGGCGACGACAAGTCCAGTTGCATTGGTATTGATAAAAAATTGGCAGTGACATCAACAATAATACGGACAATTCTGGATCTGGTCTATCTTATACGTGTATTTCTTCAATTTCGCACTGCTTATGTTGCTCCATCTTCTCGAGTGTTTGGAACTGGTGAGCTTGTGATTGATCCAATGAGGATTGCTATTCGGTACTTAAAGAGTTATTTTGTAATGGACTTCTTTGCTTTGCTACCACTTCCACAGGTACATTCCTTCATTGTTTGTATCACAACTTGTAGTATCATATGCATATGCTTTTGTTAGATATGATTTGTATTACTCTACTTCATTGTTTTAAGCATTTCTTTTCCTGTTTTCTTTGAACTATCTTTCTTAATCAACAGATTGTTGTTTGGAGATATCTCCATACTTTGGATGGTCCAGATGTACCGTCAACAAAAAATGCATTGGTTTGGGTTGTATTGTTTCAATATATTCCAAGGTTGCTACGGATTTTCCCTGTGACCAAAGATTTGAAAAGGACGGCTGGTGTTTTCATTGAAACTGCTTGGCTTGGTGCTGCTTACTATCTTCTATGGTTTATGCTGGCTGGTCATGTAAGTGCTTGTATGTATCTTCAGCTGTTAGTGTCTTCATCTGGAGGGCATTATCAAAATGTTATTTTATTTTCCTTCTTTTACGATATGATGAGAACCTGGACTATTAACAGAGTTGATTTCTGACTTCTCCATTGTTTGCGGATCTTGTATTCTTGTCTTGGACTTGTAGCATTGAATAGTACTCTTTGAAATTTTCTATATTTGTTACATTAAAAACAAATACACTCTGTGCCTATTTATTTAGAAATTTTGTATTTCTTCATGCTACCAAGTTCAGATACTTTTCGCCGGTTATTGTTGCCAACAGTATTTTTATTAAAAAAATTTGCAGCATTGTTCATTAACATTATCTTTTTTTTTAACACAGGAGGTTCATTAACATTATCTCGTAGAATGTTGTAGAGAATCACATTTCCCTGACATATTGTACCTTTTCATTTAAACTTTGTGGTGCAGAATGTTGGTACTTTGTGGTATTTTTTGACCATAGAGCGGGAAGATTCTTGCTGGCGCTCGAACTGTCATAGCAATGATGGCTGTAATAAAAGCTACCTGTACTGTAGTGATAATCATACTGGCAACTATACCAGTTGGCTTAGTAAGAGAACAGAACTTCTCAGTGCATGCAGTACTAATTCTTTCCAATTTGGTATTTTTGAACAAGCGCTGGTGTCTGGAATACTTCGTCCAGGAAATTTTATCTCTAAAATCTGCTATTGCTTCTGGTGGGGACTACAAAATCTAAGGTAATGGAGAATACTTGATCTATCTGATGACTGTTGTATGAGAAATATCTCGTGATGCAGAATGCTTATTTATGAAATGCAAGGCTTTGCTGGCCTTAGTGTGTGTAAAGTCCATTATTCACCACTTTCTAAACTCTAAAGGGACAAAAATATACCAAGGATGCTGTTGCTGTGTTCTGCAACATTTCATTTTATGCATCACGCCGATTCTGATAAACTGGAACTGGAGTATTGCGAGGGAATTAGGGCTAGCATGATAAGTCCATTGACTACCTATCCAACCGTAGTGGAATCAGTGCCACTGAGCACATCAAATGATTGTGCGCTGTGTTGGATGGCGTGGCATACAGAGAATGAATAGATATAATTTTAATTTGAGCATGATAGGTGATTGTGTTCTTTTTAAAACAACAAAAATATTCACATGGGTTAGAGCTAAATTGTTAACTAGGTCTTGTACAAGCCGTATTATTAGTAATAAGGCTGATACTTTAAATTTAGTCTATTTGCACCTTAGTGCTTTAAACTAAATTTATTGATTTTAATGACTAATTTTTTTCGTTCCTAAATTTCTACCAATCCAAGCTGCCTAGTAATAGTAGCAGTAGCAGTAGTTGGCAGTTTCCCACATTCCTGGTAACCAATGGGGGCAAGCTTGAGGAGGAACATAGGTCTAGGAACTGGGACCTTTTTTTTTTTTTTGGTATCTAAATATGTGTTCTAGAGTTAGTCATTTTGTTTGTACTCCCTTGACACATGATCTTAGAACCGGTGAAACTTGTTTAAAGTTTTATGGACGGTGGACCTTTAAAGCTTCAATATACATTTTTTATTTTTCTCATGAAATTAATTTTGTGATGTGTAACATACCACAGAAATTGGTGATAAAATTGTACCTCCCAAGATTGTGTCAGTATTCAAACGACCAATTTCTGAAGCCAAAGTCTTATATGTCTATATGGCTATGTCGATATCTGATATTTATTGTCCATCATTCTTATGACTAACTTCCGTTTCCATTTTCATCAGTACCCTTGGTCAAGGGCTTCAAACAAGCATATATCCTGGAGAGGTGTTATTCTCTATCGCAATATGTGTTATTGGGCTAATTCTTTTTGCTCTCCTCATCGGCAACATGCAGGTGAGTGAAATGGTACTAAAATGCGCTACTTAATTATTTTCTGTCCTTTTTCTTTGGTTTATTCTGAATATTTTTTTCCAGACCTACCTTCAATCAGTTGCTATACGGCTTGAAGAGATGAGAGTTAAGAAACGTGATGCTGAGCAGTGGATGCATCATCGTTCACTGCCTCCTCAAATAAGAGAGCGAGTAAGGAGATATGAACGCTATAGGTGGTTGGAGACCAGAGGAGTAGATGAAGAAAATTTGGTTCAAACCCTTCCAAAAGACCTTCGGAGGGACATTAAGCGCCATCTCTGTTTGGGTTTAGTGAAAAGGGTTAGATATATCTGTGTCCAAGTATCTTTAAGCCTTTCAGCAATTTTGTGCTGATAAATAGCATTGTCCTTTTTTGCTTGTAGGTACCTTTGTTTGAGAATATGGACGAAAGATTGCTGGATGCAATATGTGAGAGGTTAAGGCCTACACTATACACTGAAAATGAATACATTTTGAGAGAAGGCGATCCTGTGGATGAGATGCATTTCATCCTCCATGGCTGCTTGGAGAGTGAGACCACCGATGGGGGCCGAAGTGGATTCTTTAACAAGGTCCAGTTAAAGGAGGGCGCTTTCTGCGGTGATGAGCTGCTCACATGGGCATTGGATCCTAAATCTGCTGCTAACTTCCCAGCTTCAACTAGGACAGTGAAAGCTCTTACTGAGGTTGAGGCATTTGCGTTGTGTGCTGAGGAGCTGAAATTTGTGGCCAGTCAGTTCAGGAGGCTCCACAGTAGGCAAGTTCAGCACACGTTCCGGTTCTATTCCCAGCACTGGAGGACATGGGCGGCCTGTTTCATTCAAGCGGCATGGCGCCGCTATTACAAGAGGAAGATGGCCGAGCAGCATCGCAAGGAAGAAGAGGCTGCAAACCGGCAAAGCAGCAGCAGCCACCACCCTAGCCTCGCAGCAACCATCTACGCATCTCGCTTTGCAGCTAATGCACTCCGAGGAGTTCACAGGCTCAGAAGCAGGGCCAGCCCGACAATTGTGAGATTGCCAAAGCCTCCAGAACCAGATTTTGCCGTCGATGAAGCTGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017229