BGIOSGA017243

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Revision as of 04:42, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017243| Description = Phytosulfokine receptor kinase| Definition = Oryza sativa Indica Group BGIOSGA017243, complete gene.| tag = H0821G03....")
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Gene Name

BGIOSGA017243

Description

Phytosulfokine receptor kinase

Definition

Oryza sativa Indica Group BGIOSGA017243, complete gene.

LocusTag

H0821G03.8

Ensembl Transcript ID

BGIOSGA017243-TA

Ensembl Protein ID

BGIOSGA017243-PA

Length

6215

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31953846..31960060

Sequence Coding Region

31953846..31953883,31955238..31955320,31955500..31955643,31956960..31957295,31957379..31957531
,31957651..31957866,31957965..31960060

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31953846..31960060 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31953846..31960060 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCCTCACTAGTCTCCATGGATCGCGACAACAGGACCTGTTCGTCCGGTCCGGTTGATGTTACAACTTTGCTCTTGGAAAAGGAAGCTTTCATGGGCCGAGGAGGCGTTGTGGCAGGCTCCGTCGCGGACGCCATCGAGCTCGACGTTCCCGGCTTCAACTATGAGGTCCCGGTTATCGTCAGGTTGTTGGCAGAACGCACCAAGACGAAGTTGCTTCCAGGCGCCGTTACGGACGCGACGTGCGAGTTGCGACTTGACTATTCCAATATCTCCACGTCCCATGGCTGCTTCGTGGAGGAGAGGACGGCGATGATGGACATTGGCTCCTCTCTGACGCGCTCAAACGGCACGGTGCCGCCATCATGGGGGCGCGGCGACGGTGACGACGACTGCTGCTTGTGGGAGCGCGTCAAATGCAGCAACATCACTGGGCGAGTATCACATCTCTACTTCTCAAACCTGTATGATTCTCTGGAAGTGCTAAATGCACATGGTGACTCGTTTTGGCGTTTCAACACGACGGTCTTCTCCTCATTCCCGGAGCTTCAGTTCCTGGATCTGTCCAGTATCTATCCCAGTTCTCTAAATATCGATGGCTTGGTAGGGCTGAAGCTGCCCAAGCTACAGCATCTCAACCTCAGTTATAACTGGTTGCAAGAGAGTATCCTCGCAGATCTTGGGGAACTGGTTTCGCTTGAAGTCCTAGATGCCAGCTCCAACGCCATGAGTGGAGTTGTTCCCACTGCAGTTTTAAAAAATCTTACGAATCTGAAGGAGCTGAATTTGAGTGCCAACGGATTCAGCGGAAGCCTTCCGGGGTCATTACTTGAACTACCTCACCTTGATCCCTCAGGAAGTTCGTTAGCAGGACGTACTCCAATTAATTCATCTTTGGAGCCAGTTTCACTACAAGTATTAAATCTCAACAACAACAGGATGAGTGGAGCTCTTCCAACCGAACGAGCATTCGGATATCTAAGGAACCTACGAGAATTGCATTTGAGTTCCAATAACTTCACTGGAAACATTTCTACTTTCTTGCTTTCACTTCCACATATTGAACGATTGGATCTCTCGGGAAATACTTTTGAAGGACCTATCCCTATAACTCCATCTTCAAATCTTTCTCTGTCTCTCAAAGGTCTTCGGTTTTCCCAGAACAATCTGAGTGGTAAACTCTCATTTTTTTGGCTGAGGAACCTCACTAAACTTGAAGAAATCAACTTGTCAGGGAATATTAATTTAGCAGTTGATGTCAATATTCCTGGATGGGCACCTCCATTCCAACTGAAACAGTTAGCTCTCTCTGGTTGTGGTCTTGACAAAGGCATAATTGCAGAACCACACTTTCTACGCACACAACATCATTTGCAGGAGCTTGACTTGTCAAACAATAACTTGTCAGGAAGAATGCCGAATTGGCTTTTTACAAAAGAAGCAACTCTGGTTAACCTAAACCTTGGAAATAACTCGCTAACTGGATCTCTAAGTCCCATATGGCACCCCCAAACAGCTCTACAATCTATTGTTATATCTACCAACCGTATTACAGGGAAGCTACCTGCCAACTTCAGCGCAATATTTCCAAGCTTGTCCACTCTGGATTTGTCAGACAATAACTTTCATGGAGAAATTCCGATGTCACTGTGCAGCATCAAACACATGAAGGACTTGAGCTTATCAAACAATAATTTTTCTGGTAAAATGCCGACTTGTGTGTTCACTGATTTTCTTGAGCTGTGGACCTTGAGTGCCTCAAACAACCAGCTTGGAGGTCTGGTGTTTGGTGGGATGAAAAAACTGTCCATCGGGTTTGCAATGCACCTACAGAACAACAAATTTGAAGGAACACTGCCTCGTAATCTGTCAGGAGCACTAGTAATCATGGATTTGCATGATAACAGCCTGTCCGGTGAACTTGACACCTCATTTTGGAATCTGTCTAAATTGCAGGTACTAGATCTTTCTGGGAACCATATAACTGGCAGTATCCCTCAAAAAATTTGCAGCTTGGCAAGCATTGAAATTTTAGATCTTTCAAACAACAACTTATCAGGATCTATACCAAGATGTGCCAGTGCATCTCTAAGTTCGCTTAATCTGTATGGGAATTCATTATCAGGAAACATCTCGGATGATCTTTTCAACACATCAAATCTTATGTATTTGGATATGAGACATAATAAGTTGACTGGTAACCTCAATTGGTTACGGCATCTTGATAAAATCAAGACACTTTCATTGGGATGGAATGACTTTGAAGGCCAAATCACTCCAAACTTGTGTAAACTAAAGTGCCCAAGGATAATCGACTTCTCACACAACAAACTCTCAGGCTCACTGCCACCATGTGTTGGCAACATCTCTTGTGAGAGTGATACGGCAGCTCAAAATTATTCACCATTGCTACTTATTTATGTTATAATAGAGGCTTACATAATTGTTCATGACCCAATAGACTTCACCTTTGCTACAAAAGGGGGACAATATACATATGGTTACAACTTCTTCGATCTGATGTCTGGTATCGACTTATCCGGGAATATGCTGTCAGGAGAAATTCCATGGGAGCTTGGGAATCTGAGCCATATCAAATCCCTCAACCTGTCCAACAATTTCTTCACTGGTCAAATCCCAGCAAGCTTTGCAAACATGAGCGAGATTGAAAGCTTGGACCTTTCCCACAATGAACTGAGTGGATTGATTCCATGGCAGCTGACCAAATTATCGTCATTAGCGGTGTTCTCTGTGGCATATAACAACTTATCAGGATGTATTCCAAACTCTGGTCAGTTCGGCACGTACGGTATGGATAGCTACCAAGGCAACAGTAATCTTCGGAGTATGTCAAAGGGAAACATATGCTCTCCAGATTCAGGAGCAGGTGACTTGCCATCGGAAGGAAGAGACAGTATGGCAGATGATCCAGTGCTCTATGCAGTCAGTGCTGCCTCATTCGTCCTGGCATTTTGGGGCACCGTTGCTTTCTTGTTTTTCCATCCACTCGGACGGCGTGCAATTCTCGCGACAGGGAATTTGGTGTTTTGGTGTGGTCATTAA</cdnaseq>

Protein Sequence

<aaseq>MDASLVSMDRDNRTCSSGPVDVTTLLLEKEAFMGRGGVVAGSVADAIELDVPGFNYEVPVIVRLLAERTKTKLLPGAVTDATCELRLDYSNISTSHGCFVEERTAMMDIGSSLTRSNGTVPPSWGRGDGDDDCCLWERVKCSNITGRVSHLYFSNLYDSLEVLNAHGDSFWRFNTTVFSSFPELQFLDLSSIYPSSLNIDGLVGLKLPKLQHLNLSYNWLQESILADLGELVSLEVLDASSNAMSGVVPTAVLKNLTNLKELNLSANGFSGSLPGSLLELPHLDPSGSSLAGRTPINSSLEPVSLQVLNLNNNRMSGALPTERAFGYLRNLRELHLSSNNFTGNISTFLLSLPHIERLDLSGNTFEGPIPITPSSNLSLSLKGLRFSQNNLSGKLSFFWLRNLTKLEEINLSGNINLAVDVNIPGWAPPFQLKQLALSGCGLDKGIIAEPHFLRTQHHLQELDLSNNNLSGRMPNWLFTKEATLVNLNLGNNSLTGSLSPIWHPQTALQSIVISTNRITGKLPANFSAIFPSLSTLDLSDNNFHGEIPMSLCSIKHMKDLSLSNNNFSGKMPTCVFTDFLELWTLSASNNQLGGLVFGGMKKLSIGFAMHLQNNKFEGTLPRNLSGALVIMDLHDNSLSGELDTSFWNLSKLQVLDLSGNHITGSIPQKICSLASIEILDLSNNNLSGSIPRCASASLSSLNLYGNSLSGNISDDLFNTSNLMYLDMRHNKLTGNLNWLRHLDKIKTLSLGWNDFEGQITPNLCKLKCPRIIDFSHNKLSGSLPPCVGNISCESDTAAQNYSPLLLIYVIIEAYIIVHDPIDFTFATKGGQYTYGYNFFDLMSGIDLSGNMLSGEIPWELGNLSHIKSLNLSNNFFTGQIPASFANMSEIESLDLSHNELSGLIPWQLTKLSSLAVFSVAYNNLSGCIPNSGQFGTYGMDSYQGNSNLRSMSKGNICSPDSGAGDLPSEGRDSMADDPVLYAVSAASFVLAFWGTVAFLFFHPLGRRAILATGNLVFWCGH</aaseq>

Gene Sequence

<dnaseqindica>1..38#1393..1475#1655..1798#3115..3450#3534..3686#3806..4021#4120..6215#ATGGACGCCTCACTAGTCTCCATGGATCGCGACAACAGGTACAAGTAGTAACTTGCTCACGAGTAATTGTGGTGTTGTGCTCCAAGCCAGAGAGCCGGCACACGCAACGTGTCGTTCGTATTATCCGTTGTACATTCCTCTTAGACTACTTATCCCTATACGCATGACGCATCTCTTTTTTTCCCCTGTTCACATGTTACAGTCAAATTGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATGCGGCACGGGTTCTCCGTTCACGAATCCAAACTTGGGAGATCTGCTCTTTCTGTGTTTAGATCAGCGTAAAGTTTGAATTTTGGTTAAAATTAGAGATGATGTGACTGAAAAATTATGTGTGTATGACAGGTTAATTTGATGAAAAAAGACTGAAGTTTGGGTCCAAACTTTAGATCTAAACACAGCCTCAGTTGCAGATTTTCTCCTCTTTTTTTGCAAGTTCAGAGGAGCGCATGGCTACTGGGGTTGTGTTTGGATCCAAACTTCAATCCTTTTCCATCACATCAACTTGTCATACACACAACTTTTCAGTCACATCATCTTCAATTTCAACCAAAATTTAAACTTTGCCTCAATCTAAACATAGCCTGGATAACAAATCAACAGATAGGAATCCTGCCTGATTATTGACAGGTAAGTTCTCGCCTGATATTTCGAGGTGCAGAGTTGGCTCTAGTTGAGGTGATGTGCCACTCCAAAGTCCAAACTGGTTGAGACCGAATTTAGGGTGTGTTTAGGTCCAAACTTTGGATCTAAACTTTCAATTTTTTTCATCACATCAACATATCATACACATACAATTTTTCAGTCACATTGTACCAATTTCAACCCAAACTTTTAACTTTAGAAGGAACTAAACACAGCCTTAGTTTTAAACTTCCAACTTTTCCATCACATCAAAAATTTCCTACACACATAAACTTCCAACTTTTCCGTCACATCGTTCTAATTTCAACCAAACTTCCAGTTTTAACGTGAACTAAACACACCCAGCACCCTCCCTGCAGTAGCTTGTTTAATAAGTCTAAGATACAGCATCAAGAAAAACAATTGCTCACACTAGAAAATGGGCAAGCATACGTACGACAGTATGAGGACGGACAAAAATCGTCATAATCTTCAACCACTTCATCAAACCAATCTTAAAAGGACCACTAGAGCATACCTGATATCATTGATGCAAATAAATCAGTCTGGTGTCAGCGCAACGCAAACCATACCAATCGGCTTCACCAATGCTCATCAAACCTCTCAACCTATTTTCACACGCTATTCGCTGTCGTTTTCGCCATCGGACTTGAGATGCTTGCATCCTTGCGTCCTTTGCTGGAATCGCATGGCAGGACCTGTTCGTCCGGTCCGGTTGATGTTACAACTTTGCTCTTGGAAAAGGAAGCTTTCATGGGCCGAGGAGGCGTTGTGGCAGGTCCAGCCTGATTGCTGCCACTGGTAACCGGCCCCAAGTCAATCACAGAAGAAGCTCCCAAAAGGCCGGGGGAAACAGAAGATTGGGCCAAAAATTTCTTTCGGAGATTTTGCAGGACCGTGCCAGGTAAGTTGTTGGTGGGAATGGGATGTACAGATGACTGTACTAGTTGCTTGCAGGCTCCGTCGCGGACGCCATCGAGCTCGACGTTCCCGGCTTCAACTATGAGGTCCCGGTTATCGTCAGGTTGTTGGCAGAACGCACCAAGACGAAGTTGCTTCCAGGCGCCGTTACGGACGCGACGTGCGAGTTGCGACTTGACTGTATGCGATCGGGCTTTGCATCTGCTCAAGTTGCTTCCTCCGTATCAAAGTAAGTTTATTTTTTCGCTCGTCTTACAACAAAACTAAAATACCGCATACTTCACCAAATCTTAATGCAGTTATTTATTACTTTATCTATTTTTCACGAAATCTAATATAATAATTACTTAAAATAAATTTATTTTGGGATAAACAAAAAAAGACATAAATGATCTTTTCCTAGGACGGAGAATGTATAATGCAATGCTACATTCAATCTCTAAAGCTCAATTTGAGAAGCTTAAAATTCTAAGAAACAATTGATTGGTAAACAGTTTCTGAGAATTTAGAAAAGCTAGATTTCTTATAACTACAACTTCTCAAAATCTGAAGAAAAAGTTGAACGGTTTAAGAGAGTTTCTGATTCTAGAAAAAGGTATAGATGCTAGAAGCTTTTCAAACAGACCCTAAACTCAGATGCTGAGGGCACGCAACGCGAAGGTGACCCAGAACAAAAAAAAATAAAAAAGTGAATTGCACTTTGAGCCATGTTTTATTACCAAAGTTTCACTTTGGATCACTCTATACACAATCTTTTCACTTTGGACTAGGCAACTTTACCTTTGTTGCACAATAAACCACCATAACTCTTTACGCTAGTGATGTCTAGCGTTCTTTCGATAAAGGTATAGCAAGCATTTAGACATGAAAATTTACTAGCACGTCGGTAACAATTCGCTCAAAGTCATCGAAGAACTGAAGATGTGGTTTGGGGTGCTTCATTGTGCAACAAAGGTAAAGTTACCTAGTCTAAAGTGAAACTTTGACAATAAAATATAGCCCAAAGTGAAATTAACGACGTCGACCAGCCCGTACACCACGGGAGAAGAAAGGGGGATCAGCTCCGGTGACTCCCAACTTGGCCTTAAAATTTCAGTTATCGACGAAAGCAGATAATCTCATCATGAGATCTCCGCGTTCCTGCTGTCCCACACTCCCACTTGTCCTTCCAGAATCCCAGACTGCAAAACTTTAAAACCACAAAGCTAGCTACAGGGTCGTCGCGTGTCAACTCACAAAAGTCACGGACCGGGTACGACCAGGAAAACCTGGTCCAATCAAAAGTTGCTTCACCAGCCGTGTGTACCCATGCAAGTTCATGGAAACAGGACAAACGCAGCAGCATGATAAAACCACGGACGCAATCCAGTAATCCACCACTGATCGATCATCCTCAGGTGTCTCCAGCCCGCTAGAGATGAGCGCAGGAGAAGACGGAGTTTATTTCAGGATGAGATTCTTCTTCTTCTTCTTCTTGGTTGTGCTATGCTTGCTAGATTCCAATATCTCCACGTCCCATGGCTGCTTCGTGGAGGAGAGGACGGCGATGATGGACATTGGCTCCTCTCTGACGCGCTCAAACGGCACGGTGCCGCCATCATGGGGGCGCGGCGACGGTGACGACGACTGCTGCTTGTGGGAGCGCGTCAAATGCAGCAACATCACTGGGCGAGTATCACATCTCTACTTCTCAAACCTGTATGATTCTCTGGAAGTGCTAAATGCACATGGTGACTCGTTTTGGCGTTTCAACACGACGGTCTTCTCCTCATTCCCGGAGCTTCAGTTCCTGGATCTGTCCAGTATCTATCCCAGTTCTCTAAATATCGATGGTATGTGCACAGTGTCCATCCTGAATAACCAAGATTGCTCCTTGCTTTTGCAATGACTAATATTTTCAGACAAACTATCATAGGCTTGGTAGGGCTGAAGCTGCCCAAGCTACAGCATCTCAACCTCAGTTATAACTGGTTGCAAGAGAGTATCCTCGCAGATCTTGGGGAACTGGTTTCGCTTGAAGTCCTAGATGCCAGCTCCAACGCCATGAGTGGAGTTGTTCCCACTGCAGGTACAGAAATGGATATTTAGAATGAACATAGTTCAGTAAAGAATTAGCATCTTGTACATGTGATGATTATATTTGTAACATCTTGTACATGTGCTGTTATATTTGTAACATTATTGCAGTTTTAAAAAATCTTACGAATCTGAAGGAGCTGAATTTGAGTGCCAACGGATTCAGCGGAAGCCTTCCGGGGTCATTACTTGAACTACCTCACCTTGATCCCTCAGGAAGTTCGTTAGCAGGACGTACTCCAATTAATTCATCTTTGGAGCCAGTTTCACTACAAGTATTAAATCTCAACAACAACAGGATGAGTGGAGCTCTTCCAACCGAACGAGGTAAAAATAATGGACATTTCATGCTTGATCATAACATCTGGGCAAGATTTTCTATGATGCTGATTATAACTGATTCATTGTATTCATACTTTGCGCAGCATTCGGATATCTAAGGAACCTACGAGAATTGCATTTGAGTTCCAATAACTTCACTGGAAACATTTCTACTTTCTTGCTTTCACTTCCACATATTGAACGATTGGATCTCTCGGGAAATACTTTTGAAGGACCTATCCCTATAACTCCATCTTCAAATCTTTCTCTGTCTCTCAAAGGTCTTCGGTTTTCCCAGAACAATCTGAGTGGTAAACTCTCATTTTTTTGGCTGAGGAACCTCACTAAACTTGAAGAAATCAACTTGTCAGGGAATATTAATTTAGCAGTTGATGTCAATATTCCTGGATGGGCACCTCCATTCCAACTGAAACAGTTAGCTCTCTCTGGTTGTGGTCTTGACAAAGGCATAATTGCAGAACCACACTTTCTACGCACACAACATCATTTGCAGGAGCTTGACTTGTCAAACAATAACTTGTCAGGAAGAATGCCGAATTGGCTTTTTACAAAAGAAGCAACTCTGGTTAACCTAAACCTTGGAAATAACTCGCTAACTGGATCTCTAAGTCCCATATGGCACCCCCAAACAGCTCTACAATCTATTGTTATATCTACCAACCGTATTACAGGGAAGCTACCTGCCAACTTCAGCGCAATATTTCCAAGCTTGTCCACTCTGGATTTGTCAGACAATAACTTTCATGGAGAAATTCCGATGTCACTGTGCAGCATCAAACACATGAAGGACTTGAGCTTATCAAACAATAATTTTTCTGGTAAAATGCCGACTTGTGTGTTCACTGATTTTCTTGAGCTGTGGACCTTGAGTGCCTCAAACAACCAGCTTGGAGGTCTGGTGTTTGGTGGGATGAAAAAACTGTCCATCGGGTTTGCAATGCACCTACAGAACAACAAATTTGAAGGAACACTGCCTCGTAATCTGTCAGGAGCACTAGTAATCATGGATTTGCATGATAACAGCCTGTCCGGTGAACTTGACACCTCATTTTGGAATCTGTCTAAATTGCAGGTACTAGATCTTTCTGGGAACCATATAACTGGCAGTATCCCTCAAAAAATTTGCAGCTTGGCAAGCATTGAAATTTTAGATCTTTCAAACAACAACTTATCAGGATCTATACCAAGATGTGCCAGTGCATCTCTAAGTTCGCTTAATCTGTATGGGAATTCATTATCAGGAAACATCTCGGATGATCTTTTCAACACATCAAATCTTATGTATTTGGATATGAGACATAATAAGTTGACTGGTAACCTCAATTGGTTACGGCATCTTGATAAAATCAAGACACTTTCATTGGGATGGAATGACTTTGAAGGCCAAATCACTCCAAACTTGTGTAAACTAAAGTGCCCAAGGATAATCGACTTCTCACACAACAAACTCTCAGGCTCACTGCCACCATGTGTTGGCAACATCTCTTGTGAGAGTGATACGGCAGCTCAAAATTATTCACCATTGCTACTTATTTATGTTATAATAGAGGCTTACATAATTGTTCATGACCCAATAGACTTCACCTTTGCTACAAAAGGGGGACAATATACATATGGTTACAACTTCTTCGATCTGATGTCTGGTATCGACTTATCCGGGAATATGCTGTCAGGAGAAATTCCATGGGAGCTTGGGAATCTGAGCCATATCAAATCCCTCAACCTGTCCAACAATTTCTTCACTGGTCAAATCCCAGCAAGCTTTGCAAACATGAGCGAGATTGAAAGCTTGGACCTTTCCCACAATGAACTGAGTGGATTGATTCCATGGCAGCTGACCAAATTATCGTCATTAGCGGTGTTCTCTGTGGCATATAACAACTTATCAGGATGTATTCCAAACTCTGGTCAGTTCGGCACGTACGGTATGGATAGCTACCAAGGCAACAGTAATCTTCGGAGTATGTCAAAGGGAAACATATGCTCTCCAGATTCAGGAGCAGGTGACTTGCCATCGGAAGGAAGAGACAGTATGGCAGATGATCCAGTGCTCTATGCAGTCAGTGCTGCCTCATTCGTCCTGGCATTTTGGGGCACCGTTGCTTTCTTGTTTTTCCATCCACTCGGACGGCGTGCAATTCTCGCGACAGGGAATTTGGTGTTTTGGTGTGGTCATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017243