BGIOSGA017247

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Revision as of 04:42, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017247| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017247, complete gene.| tag = OsI_176...")
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Gene Name

BGIOSGA017247

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017247, complete gene.

LocusTag

OsI_17681

Ensembl Transcript ID

BGIOSGA017247-TA

Ensembl Protein ID

BGIOSGA017247-PA

Length

4973

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31996881..32001853

Sequence Coding Region

31996881..31997394,31998143..31998370,31998916..31998980,31999208..31999361,31999447..31999556
,32000495..32000670,32001250..32001316,32001388..32001560,32001642..32001731
,32001838..32001853

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31996881..32001853 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31996881..32001853 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCCACGCCGCCGTCGTCGAGATCATCGACGACGACGACGACGTCGCCGCCGCCTCCACCCCTCCCGCCCTCCACAAGCGCTCCCATGCGGTCGCCGCCGCCGCCCCCGATTCCCCCGACGCCTTCTCCCCTTCCCCTCCAGACCCGAAGCGGCGGCAGCTCGCGGCGTCAACCATCGTGCTCGACGACACCCCCACCCCTCCGAAGCGGCGGCCGCCGCCGGTAGCTGCCGACCGGTCCGCCTCCGTGGTGGCAGATACGCCCCGGTCGTTCGTGCCGTGCTCGCTCCGCAACCGCGCCATTGCTGGTGATACGCCCGATTCTGTTCTCCCGAGCCCGTCGTTCCACCTCGACGCTCCCGATTCCGCGACCCCTGGCTCGGATGTCCCGTGCTCCGTCGGGCTTGACGACATTGTTCCTGAGACCCCGGGCTTCAACTCCCCACGCTTGGCTCGTCCCCCGGCCGTGCCTGGCTTGACGTCTCCTATGACCGCGAGGAAATTTTCTGGAGTATCTTGTCCAATATCTCTGGATAGTGATGACGAATTGGATGACACTGTATACAGGGAGTCTTTAACCAGGACGCCAAGCAATATGGCGAAGCCAGAACACGCAATTCAGCCTTGTACTACTTCCTGTACTGATAAAGTTGAGAATGCAAAAAGTACAGATAAGAAGGATTATTCAAAATCAAATGTTGGATATCAAACAAACAATTCTGCATGCAAAAATAATGGAGATGTCTTGTTTTTGAAGGAAGAAAATGCCCTACCGATTGAAGAAAGGAAGAAGAAACAACAGGAAACCAAAAAGCAAAAGGAAGCTATGAAAGCTGAACTAGCAGAATTGAAGAAGCTGGAGAAAGAAAAAAAGAAGTGGGAATCAGGGAAGTTAGCTACAAAATGTATTGTTGCTGAGATTGACTCAAGTGTTATTGAAAGTGGCTCAGTTGGAGGTCATCTTGTGCAAGGATTTCATGAGAAGGGCCTTTGTTTTCGAGTAACATCTAATTCAATCAAGGGGTCAATTTTATGGAAGATGCAAATTCCTAATGAGTTTACCCAGGACCAAGCTTCAACATCACAAGTGCCATATATTCTCTTTGTGCTTCAAGCTGAGGAATTCTGCGATCTTGTAAGTGGTGGTACATTACTGGATCATGTTCAGAAAGTTCGAAGACAGTATCCAGAATTCACAATTTGCTACGTTACTAATAAACTGATGAGCTTCATAAAAAGACGTGAGCAGAATCAGTACAACAAGACCACATCAAATTCTAATAGTTGGAAGCGTCCACCAGTGGAAGAGGCCTTATGCAAATTAGCGACACACTATGCTAGAGTGCGCTCAAGGCACTGCACAGATGAAGCTGAAGTGACAGAGCATATTGTTGGCTTGACATATAGTCTTGCGAATTGCAAGTTCAGGCAAGTTACGTTTGACATTCTTCTGGCCAATATTGTGCCTTTCACGCACATTTGGAAACCATTGACATGGTTATCTGTGCATGCTAATGGTTCAAATATTTCTAAAGGTTGCGTTGATAAAGATCGGATTAAGAAAAGTGCCTGTACATTAGATGATTAG</cdnaseq>

Protein Sequence

<aaseq>MASHAAVVEIIDDDDDVAAASTPPALHKRSHAVAAAAPDSPDAFSPSPPDPKRRQLAASTIVLDDTPTPPKRRPPPVAADRSASVVADTPRSFVPCSLRNRAIAGDTPDSVLPSPSFHLDAPDSATPGSDVPCSVGLDDIVPETPGFNSPRLARPPAVPGLTSPMTARKFSGVSCPISLDSDDELDDTVYRESLTRTPSNMAKPEHAIQPCTTSCTDKVENAKSTDKKDYSKSNVGYQTNNSACKNNGDVLFLKEENALPIEERKKKQQETKKQKEAMKAELAELKKLEKEKKKWESGKLATKCIVAEIDSSVIESGSVGGHLVQGFHEKGLCFRVTSNSIKGSILWKMQIPNEFTQDQASTSQVPYILFVLQAEEFCDLVSGGTLLDHVQKVRRQYPEFTICYVTNKLMSFIKRREQNQYNKTTSNSNSWKRPPVEEALCKLATHYARVRSRHCTDEAEVTEHIVGLTYSLANCKFRQVTFDILLANIVPFTHIWKPLTWLSVHANGSNISKGCVDKDRIKKSACTLDD</aaseq>

Gene Sequence

<dnaseqindica>1..514#1263..1490#2036..2100#2328..2481#2567..2676#3615..3790#4370..4436#4508..4680#4762..4851#4958..4973#ATGGCGTCCCACGCCGCCGTCGTCGAGATCATCGACGACGACGACGACGTCGCCGCCGCCTCCACCCCTCCCGCCCTCCACAAGCGCTCCCATGCGGTCGCCGCCGCCGCCCCCGATTCCCCCGACGCCTTCTCCCCTTCCCCTCCAGACCCGAAGCGGCGGCAGCTCGCGGCGTCAACCATCGTGCTCGACGACACCCCCACCCCTCCGAAGCGGCGGCCGCCGCCGGTAGCTGCCGACCGGTCCGCCTCCGTGGTGGCAGATACGCCCCGGTCGTTCGTGCCGTGCTCGCTCCGCAACCGCGCCATTGCTGGTGATACGCCCGATTCTGTTCTCCCGAGCCCGTCGTTCCACCTCGACGCTCCCGATTCCGCGACCCCTGGCTCGGATGTCCCGTGCTCCGTCGGGCTTGACGACATTGTTCCTGAGACCCCGGGCTTCAACTCCCCACGCTTGGCTCGTCCCCCGGCCGTGCCTGGCTTGACGTCTCCTATGACCGCGAGGAAATTTTCTGGTGAAGTTTCTTAACTATTAGATGCATTCCTTTCGAGTTTTCATGAATTCTACCGGCCTAGGTTAAGCTCATTTGGCTTCATCCATTGAATTTGCCGTGTGGCAAAATAGACAAGGATTAGGTCCAGTTCTAGTCATGGAGCGTTGGAGCTTGTAGCTCATTTCTGTGTTCTTTTTCTTGGCCTTTATCATTTATCAATATAGCTATTCTTGGTGATTTATGGCAGGGGTTTCTATACAGTTTTGAGAAAACTTGTTTGCAACATTCTGAATCTGGGTCATTTTGGTTTTAACATCAGGTGGAATCAGACCTAAATCCTAATGATTGCAAACATTTCGATGATTAATCTGTCCTTAATAGTAGTTTGGAATTACCAATAAACAAAGTGTATCTGACTATTCTTTCGAGCATCATTTGTTTCTTTACTCTACTTGATATATGAAGGGTCCTTAAACCTTAAGTTACATGTTGGACCCAAATGACACCTGTCAATGTTTAGAAAGTGGCACAGATTTTTATCAAGAGGAGGGGGCAGAGATTTTTTTTCTTAAAAAAAAACTCCACTAACTATTGCTTTGTTGATGACGCAGCATGTCCACTTGTAACTTTTTTTTTGGGTTAAGATTTATCTCGACCCTGCTTTCTTATGTGGGAGGCAACTGAGCGATCACATTGATTAGTAGATGACAGCATGTTTAATATTTATTATGGTTCTTATGTGGAGTAACTCTTTCTTTCTATTTTACAGGAGTATCTTGTCCAATATCTCTGGATAGTGATGACGAATTGGATGACACTGTATACAGGGAGTCTTTAACCAGGACGCCAAGCAATATGGCGAAGCCAGAACACGCAATTCAGCCTTGTACTACTTCCTGTACTGATAAAGTTGAGAATGCAAAAAGTACAGATAAGAAGGATTATTCAAAATCAAATGTTGGATATCAAACAAACAATTCTGCATGCAAAAATAATGGTAAGAAAAACCTAAAGTGAGGACAATAAAAATAAAATATTTGACACTCATATGTGTTGTAAAATCCTTTTAGTATACATCTGGTTGTAAACAATGTAGATAACACATTATTGTTTAGTGTATTGACTATGTATGCTTTTGTTAGGAACAACCAGCTACAATCAACCCCCTCGTGCTAATCTCCTTGTGAAGATCTACCTTGAAGGAGGCTGATCCTTTATCAATAACCATTGTCCGCAGGTATGTATAACCTAAGTGGTTTGTAATTTGATCTGTTATAAACGTTGAAGCATATTTTTATATTTTCTAGGCAGAAATGTCATGGAAATGATATTTGACTGAATCGGAAGAATGTATGACCTAGTATGCCGTTAGGCATGTTAAATTACGATTACGCTGTTGGAGATCATATTGTAGTTTTAGGTGTAATTAATTGTTATGTGAGTGGAAATAGCTGAGACTTAAGATTATACAACAAAGATATTGATCAATCCAAAAGACAAAAGTTACACCTTAATAGCTGTATATGTATACTAACAAAAAAGGAGATGTCTTGTTTTTGAAGGAAGAAAATGCCCTACCGATTGAAGAAAGGAAGAAGAAACAACAGGTGTGGCATAAAGAAAATCTTCTTGTTTCAAGTTTCACAAATTATAGGTTTAGCTTTGAAATTCTTGTTCTTGCATGACATAGGAAGAGAAGAGACTAAAGAAGGAAAAGAAAGCCAGAGAAATCGAAGAAAAAAAACAAAAACGACTGGTTTGAAATCTAACAGAAGTGTATTTATTTATTCATGCCATGATCTAGAGATTAACAGAGCATATTGTTTATTTCTAGGAAACCAAAAAGCAAAAGGAAGCTATGAAAGCTGAACTAGCAGAATTGAAGAAGCTGGAGAAAGAAAAAAAGAAGTGGGAATCAGGGAAGTTAGCTACAAAATGTATTGTTGCTGAGATTGACTCAAGTGTTATTGAAAGTGGCTCAGTTGGAGGTGTGTTAAACAAAAGTAAGTTAATTAATACTAGTAATGTTTGTTCATTGTCTCACCTTTCTCCACTGCTCGGATTTCCAAACAGGTCATCTTGTGCAAGGATTTCATGAGAAGGGCCTTTGTTTTCGAGTAACATCTAATTCAATCAAGGGGTCAATTTTATGGAAGATGCAAATTCCTAATGAGTTTACCCAGGTACCGCTTACAGGATAACTTGTTTCCTTTGTTTACCTTTTTCCATTAGAAATTGCATCCCTTTATTGGTTCTTCAAATGTTTTGTTGGCCTCAACCTTATTCTGGCATGCGTACGTTGGTAAAATTTGCGCCTCCAAAGTAAAAGAAAAAAAATGATATATTTCTACTTAAACGGTTGGTTTCATCCTTATAACCAACGCACAAATGCTTTCCGGGTGTTTTTAAAGAGAGCTGCCTGTGTAATTGAACAGCCAATGCTGCTTCCTCAGGCCCAACTCCTAAAGAAGATACTTTTATTCACATGATAGTTAATCAATCATGTTCAATCAGTGGTTTCGTTGTACCTAGTTAGATGTGGACTGTTTTCCCAAGCCAATGGCTGCTAACACATTCAGTCAAACTTGATACTTTGTCCATTTTGCTAAATTGGCTGAGTATGTGCAAAGAATATTACCATTATACCATACAGAGGCGATCTGCCACTCTCAGAATGAACAATTACACATCATAGTAAATTTATAATTCTGTTAGCTTATGGGAAAATTGAAAGGGTTAAATTTCAGAAGTATCAACACCAAAATCGTTTTACTGTAGATGAGCATGAATGGTTGCAAAATGCATTCACAGTGATGTGGTATCAACCATAAATTCTAGACAGAAAGTTAGAGTTGATCAAAGAATGGGTAGTCAGGTAGAAGGTTCTCTTATAGAATTCATCACCCTTTGCTGCTTTCATGTTTTGCTTTGAAGAAATTAAACCATTTTTATGGGGTGCCAGCAGATAAATCTAGATAAAAAAAATCTCCTATTTGATGTATATATACAGTTCCACAAAAAGTCACGGAAGACTGCGCATTTGACTGGTATCTTCTTGTTTTCTCTGTGTAAATACTGGCGACACAGGAAAAATATCCTAAAGTGCCATACATTTGTGCAGGACCAAGCTTCAACATCACAAGTGCCATATATTCTCTTTGTGCTTCAAGCTGAGGAATTCTGCGATCTTGTAAGTGGTGGTACATTACTGGATCATGTTCAGAAAGTTCGAAGACAGTATCCAGAATTCACAATTTGCTACGTTACTAATAAACTGATGAGCTTCATAAAAAGACGGTTAGTTCCTGGAAGTATGGATTATCTTATATTTACTGTTCTTTTGGTCTGAACTCTGCTTTAAATTCTGATTTTGTGTTCAAATCATGTTGGTTTTTCTTAGTGCATGTAAGTTCAGTGGCAGTCAACATTAGTTTTGTGTGCTAATGTTTCTTAATTGTCATTAGTCTATTTTTGCTTGAACTATACGATCACATAGTTTTGGACTGCTGGTACTTTATGGCTAATGAAAAGCAGCATTTCTGAGAAAAAGCATTGTACTCGCTCCGTTTCACATTATAAGACGTCTTGGCATCTCAATCCATCATCTAGATTCACTAATGTATATATGAACTTGGACACATATGAAGCACATACATGGATCCATGCATGAATCTATTCAAAATCCAAAATGTCTTATAATGTGAAACAGAGGAAGTAATATGTAATATGTTGCACTGTTCACACCATGACAAACACACACGCACAAGACTGGAGAAATATGCATGACTCTCAAGGTTTGGAAGGAAAACATAGTTATGTGAGGTATTGTTTGTGTTTGCCTATCGTCCTGCTAAAATCACCTTCTTTTCATGCCAGTGAGCAGAATCAGTACAACAAGACCACATCAAATTCTAATAGTTGGAAGCGTCCACCAGTGGAAGAGGTCTGTTTGCAACGCTATCAATTTCTGTTCTGAACTACTACTGTATCCTGAAATGTCTCATATTCTTTTAGGCCTTATGCAAATTAGCGACACACTATGCTAGAGTGCGCTCAAGGCACTGCACAGATGAAGCTGAAGTGACAGAGCATATTGTTGGCTTGACATATAGTCTTGCGAATTGCAAGTTCAGGCAAGTTACGTTTGACATTCTTCTGGCCAATATTGTGCCTTTCACGCACATTTGGTGCAGAAATATTTTTGTTGTTTCACTCAATGAACAACCAAGTCCATGTTTTGATACTGTCCCCTGCTGACTGTTCTGCAGGAAACCATTGACATGGTTATCTGTGCATGCTAATGGTTCAAATATTTCTAAAGGTTGCGTTGATAAAGATCGGATTAAGAAAAGTGCCTGGTAAGTTGTGCTTAGAACTGTATACTGAACCAAATTTCCATTGTTGCTGTATGCTTTGCCTTTTTGTGTCCACTAATTGAAATAATGTTCCTTTCTCTATATACAGTACATTAGATGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017247

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017247&oldid=66141"