BGIOSGA017251

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Revision as of 04:42, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017251| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017251, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017251

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017251, complete gene.

LocusTag

OSJNBA0010D21.14

Ensembl Transcript ID

BGIOSGA017251-TA

Ensembl Protein ID

BGIOSGA017251-PA

Length

3571

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32078841..32082411

Sequence Coding Region

32078841..32078933,32079023..32079155,32079336..32081295,32081371..32081431,32081908..32082411

Genome Context

<gbrowseImage1> name=IndicaChromosome04:32078841..32082411 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:32078841..32082411 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATAATAAAACATGGCTTTGGAGAAAAAAATCCTCAGAAAGGACAATTTCAACGAAGAACAAAGCCAATATATCAGAGAGGGAACAGGAGAAAGAGAAGATTGCACGGTTAGAGAGATCCTTGCAATGCTTAAATGAACAGATTTCATTTGCTCAAGCTGAATGCGTGGAGAAGGATGCTATTTTAGCTAAGCAAGCAAAAGTGGCGGAAGAAGCAATATTAGGTTGGGAGAAAGCTGAAGGTGAAGCAATAGCTATTAAGACACAACTTGATGATACTCTAGATCAGAAAGCCGCAATTGAGCAAAGGATTTGCCATCTTGATGAGGCTCTAAATGTTGCCATGGTAGAGAGGGAGTTATTGATAAAGGACACTGCTAAACTGATTTCTCATGAGCAAGTTAAAGTTGAGAGGCTGGAAGGAGATGTAGTAGAGAAAATAAACATAATTGCTAGCTTGGATGCCGAGAATAGGAAACTTTCTGAAATGCTCTCAATGAAAGAGAAAATGATCTCAGAGTTAACTGAAGCAAAGGGTGTGATAGAGTCAAATTTCAAGAACCTTGAGGTAAAACTAGAGTCAGCGGACAAATTGAATTCTTCTCTTAGATATGAGGTTTGCATGCTGCAGAAGCAACTTGATATTCGAAGTGAGGAAAGGAAATTTAACCTGAAATCTGCTGATGCTGCACATAAACAACATCTTGAGAATGTAAAAAAGATTACAAAACTTGAAGCAGAATGCCAGAGATTGCGTTCAATGGTACGTAAAAGGCTACCAGGCCCTGCTGCCATTGCTAAAATGAGAAATGAAGTTGAAACACTGGGTAACAATGCAGTAATAACAAGGACGAGAAGGTTCAATTCTACAACATCATTCAACTCAGGCAATCTAGTGCAGAACTCCTATGATGCATCACATGAAAGTTCTTCATTGCTTGCAAGGCTGCATGCGATGGAAGACGAAAATAAGACTATGAAGGAATCTCTTTCTAGTAAGGATGGTGAGCTCCAGTATTCGCGGACCATGCTTGCTCGCACAACCTCTAAACTTTCCCAAGTTGAAGCTCAGCTTGAGGAGTTATCAAGAGGTCGGGTTGCAACAGATTTAGTAAAATGCAGTCCTACAGTGGTCGAGAACCCTCTATCATCAATCTCCGAGGACGGTTGCAATGAAGATAATGTCAGCTGTTCAAGCTCATGGGCGTCTGCCTTGATTTCTGAACTGGAACACTTCAAGAAGGGGAAGCTGACTACACCCTCTTGTAAGAGTACCGGAGTATCAGACTTGAGTTTCATGGACGACTTTGAAGAGATAGAAAAGTTAGCATTGGCATGTGATGTGAAACCTACAGAATCGTATGATTCAAGGAGGGAGTCTAGAGAATCATCAGGGAAAGAGCTAGTAACAGTTGATGGTCCTATTGAAACATCTGACCAACTCCGTCAGCACAAGATTGAGAAGGCAGTCCTGAAGTTGATAGAACTTATTGAGGGTGTTGTCCAGAGATCATCAAAAGATTATAGTAGCACTGTTGTGCTCTCTGGTGGCAGTGAGGGCGACCGCTCTAACACATTGACTGGCTACGTTGCACGTGCATTCCTGTGGAAAACGTCTGAACTTACTTCTGTACTACAAAATTTCGTCCTTGGGTGTAACGAGCTTTTGTATGGGAGTACAGATGTTGAAAGATTTGTGCTTGAAATCAATATCACACTAGACTGGATAATCAGCCACTGCTTTTCACTCCAAGATGTATCAGACATGAGGGAGACTATCATAAAGAACTTGGAGATAAATAGCAGTTCCGGACTAGAAGTTGTTCCAGTAATTAAGCACACCGGAATCCAAACAACAGATGGCATGTGTGAACCCAGGACGCCTAACAAGATGCAGATGGCGATAGTATCCGTATCAAGCTTAATGGATATTGGATATAAAGCTGATGATGACTCAGAAATTTTCAGGAATAAAATACCAGTCTCTAAATGTGAGGAATCAGAAGGAAAAGCTTCAAGCCTGCGAGCAGAGCTTAATGCATTGAAAGAAACAGGAAAAATGATGGCACATGGTGTCGATGGTGAATCCACAATCAATGAACTTGGGAAACCATCCAACTCTGACATAAACAAGGGCAATCAACACGGAGTGTCTTCTCTTGAATCCAAGCTTCAGCTAGAACGTTTCCCTGCTAAAGAAGGTCCAAAATGTGTTTCTAGGAATGAAGATCAGCATGTACAGATGCGGCTGGAGATCTCAACAGCATCAGAGAAGCTTATCGAGTGTCAGGAGACAATCCTAAACCTGGGAAAGCAACTGAAAGCACTTGCATCTCCAAAGGATGCGATCCTTTTCGACAAAGTGGTTCATACAAAAATTCAGTCTGAGCGAAAACCCCGGTCTCAGTCGCTAAACGAGATGCTAGCCATGGATGATGGAGGATTCGATTACCTCAGCTCCCCCAAAACCAAGGAGATCATATGCGCGGAACTAAGATCGCGGCATGAAAGAAGTTGCTCTGTCGACAACGGAGGCGATGATTCAGTAACATGCAGTTCCCACCCAATGCCGGTGGCACCACCAATGAGGCCCTACGATGTGAATGGAACTTGCAAGGATGAGGCTGCTCTCAAGGTAGTAGCACTTATGCCGAGCAAGCAGAAGGGGAACACCAACTTGCTGAAAAGGATTCTGGCAGGAAGGAGAAAGGAAGCCATGACCAAGCCAAATGTCGTTGCGACTGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MDNKTWLWRKKSSERTISTKNKANISEREQEKEKIARLERSLQCLNEQISFAQAECVEKDAILAKQAKVAEEAILGWEKAEGEAIAIKTQLDDTLDQKAAIEQRICHLDEALNVAMVERELLIKDTAKLISHEQVKVERLEGDVVEKINIIASLDAENRKLSEMLSMKEKMISELTEAKGVIESNFKNLEVKLESADKLNSSLRYEVCMLQKQLDIRSEERKFNLKSADAAHKQHLENVKKITKLEAECQRLRSMVRKRLPGPAAIAKMRNEVETLGNNAVITRTRRFNSTTSFNSGNLVQNSYDASHESSSLLARLHAMEDENKTMKESLSSKDGELQYSRTMLARTTSKLSQVEAQLEELSRGRVATDLVKCSPTVVENPLSSISEDGCNEDNVSCSSSWASALISELEHFKKGKLTTPSCKSTGVSDLSFMDDFEEIEKLALACDVKPTESYDSRRESRESSGKELVTVDGPIETSDQLRQHKIEKAVLKLIELIEGVVQRSSKDYSSTVVLSGGSEGDRSNTLTGYVARAFLWKTSELTSVLQNFVLGCNELLYGSTDVERFVLEINITLDWIISHCFSLQDVSDMRETIIKNLEINSSSGLEVVPVIKHTGIQTTDGMCEPRTPNKMQMAIVSVSSLMDIGYKADDDSEIFRNKIPVSKCEESEGKASSLRAELNALKETGKMMAHGVDGESTINELGKPSNSDINKGNQHGVSSLESKLQLERFPAKEGPKCVSRNEDQHVQMRLEISTASEKLIECQETILNLGKQLKALASPKDAILFDKVVHTKIQSERKPRSQSLNEMLAMDDGGFDYLSSPKTKEIICAELRSRHERSCSVDNGGDDSVTCSSHPMPVAPPMRPYDVNGTCKDEAALKVVALMPSKQKGNTNLLKRILAGRRKEAMTKPNVVATA</aaseq>

Gene Sequence

<dnaseqindica>1..93#183..315#496..2455#2531..2591#3068..3571#ATGGATAATAAAACATGGCTTTGGAGAAAAAAATCCTCAGAAAGGACAATTTCAACGAAGAACAAAGCCAATATATCAGAGAGGGAACAGGAGGTACATCACTTATCTCTTTAACATTATTAAGAAGCCTTATGAATTATGATATGTTCCTATCTGGATTTTCAACTTTTCCTTCCCTGCAGAAAGAGAAGATTGCACGGTTAGAGAGATCCTTGCAATGCTTAAATGAACAGATTTCATTTGCTCAAGCTGAATGCGTGGAGAAGGATGCTATTTTAGCTAAGCAAGCAAAAGTGGCGGAAGAAGCAATATTAGGTAAAACTCCATTCACTTTTCGCTAACTGATACATGTTCTTGTTTCAAAACTAGTTAAGCACATGATTTTTCCATCCTAGAAGAGAAATGGACAGCTGCAAGTATGCAGATACAATGGCAATTAAAGTTCTGCAATTCTTTTTTTCTGCAATTCATGTTATTGGTTTACAACTATTCTAGGTTGGGAGAAAGCTGAAGGTGAAGCAATAGCTATTAAGACACAACTTGATGATACTCTAGATCAGAAAGCCGCAATTGAGCAAAGGATTTGCCATCTTGATGAGGCTCTAAATGTTGCCATGGTAGAGAGGGAGTTATTGATAAAGGACACTGCTAAACTGATTTCTCATGAGCAAGTTAAAGTTGAGAGGCTGGAAGGAGATGTAGTAGAGAAAATAAACATAATTGCTAGCTTGGATGCCGAGAATAGGAAACTTTCTGAAATGCTCTCAATGAAAGAGAAAATGATCTCAGAGTTAACTGAAGCAAAGGGTGTGATAGAGTCAAATTTCAAGAACCTTGAGGTAAAACTAGAGTCAGCGGACAAATTGAATTCTTCTCTTAGATATGAGGTTTGCATGCTGCAGAAGCAACTTGATATTCGAAGTGAGGAAAGGAAATTTAACCTGAAATCTGCTGATGCTGCACATAAACAACATCTTGAGAATGTAAAAAAGATTACAAAACTTGAAGCAGAATGCCAGAGATTGCGTTCAATGGTACGTAAAAGGCTACCAGGCCCTGCTGCCATTGCTAAAATGAGAAATGAAGTTGAAACACTGGGTAACAATGCAGTAATAACAAGGACGAGAAGGTTCAATTCTACAACATCATTCAACTCAGGCAATCTAGTGCAGAACTCCTATGATGCATCACATGAAAGTTCTTCATTGCTTGCAAGGCTGCATGCGATGGAAGACGAAAATAAGACTATGAAGGAATCTCTTTCTAGTAAGGATGGTGAGCTCCAGTATTCGCGGACCATGCTTGCTCGCACAACCTCTAAACTTTCCCAAGTTGAAGCTCAGCTTGAGGAGTTATCAAGAGGTCGGGTTGCAACAGATTTAGTAAAATGCAGTCCTACAGTGGTCGAGAACCCTCTATCATCAATCTCCGAGGACGGTTGCAATGAAGATAATGTCAGCTGTTCAAGCTCATGGGCGTCTGCCTTGATTTCTGAACTGGAACACTTCAAGAAGGGGAAGCTGACTACACCCTCTTGTAAGAGTACCGGAGTATCAGACTTGAGTTTCATGGACGACTTTGAAGAGATAGAAAAGTTAGCATTGGCATGTGATGTGAAACCTACAGAATCGTATGATTCAAGGAGGGAGTCTAGAGAATCATCAGGGAAAGAGCTAGTAACAGTTGATGGTCCTATTGAAACATCTGACCAACTCCGTCAGCACAAGATTGAGAAGGCAGTCCTGAAGTTGATAGAACTTATTGAGGGTGTTGTCCAGAGATCATCAAAAGATTATAGTAGCACTGTTGTGCTCTCTGGTGGCAGTGAGGGCGACCGCTCTAACACATTGACTGGCTACGTTGCACGTGCATTCCTGTGGAAAACGTCTGAACTTACTTCTGTACTACAAAATTTCGTCCTTGGGTGTAACGAGCTTTTGTATGGGAGTACAGATGTTGAAAGATTTGTGCTTGAAATCAATATCACACTAGACTGGATAATCAGCCACTGCTTTTCACTCCAAGATGTATCAGACATGAGGGAGACTATCATAAAGAACTTGGAGATAAATAGCAGTTCCGGACTAGAAGTTGTTCCAGTAATTAAGCACACCGGAATCCAAACAACAGATGGCATGTGTGAACCCAGGACGCCTAACAAGATGCAGATGGCGATAGTATCCGTATCAAGCTTAATGGATATTGGATATAAAGCTGATGATGACTCAGAAATTTTCAGGAATAAAATACCAGTCTCTAAATGTGAGGAATCAGAAGGAAAAGCTTCAAGCCTGCGAGCAGAGCTTAATGCATTGAAAGAAACAGGAAAAATGATGGCACATGGTGTCGATGGTGAATCCACAATCAATGAACTTGGGAAACCATCCAACTCTGACATAAACAAGGGCAATCAACACGGAGTGTCTTCTCTTGAATCCAAGCTTCAGCTAGAACGGTAATTCTTTCAGTTATTTATTTTTCATCATTTAGCCTTCATAGTATTATGCCTAATGCAGTTATTTCTAAACAGTTTCCCTGCTAAAGAAGGTCCAAAATGTGTTTCTAGGAATGAAGATCAGCATGTACAGATGGTAAGATCCACATTATTTTACTTCTTGACTTTGTTAGTTTGTTATTCTGGAACTTGCCTTTGTACTTTGCAATGTATTAGGTATTTCATTTGGAGAATGTGTTACATATTTGTGCTTTGTATCTGCAAGTAATTTGCTCCACCGATGATAATCCTGTCTGTAATATATAGCATTGCTTTTGTTCTTGTAATACAAATTGCAGGCAAGCTCAAATAAAGAGCAGTCAGTCTTGCTTAATATGTTTTTTGTTTCTTTAATTTTGAGTCAAGTTGAATAGGACGTGATATAAATTTATTACCATTTAGTAGTGCTACAATTTTTTTTATTACCCATTCACTCTGTTTCTGTTATCTGTCTTTTTTTTTATTTTGTCTGGTTTTTTTGGGGGTAATACTTTTATGAGCCCGGCGAAAAAGTATTACCTTGATTATATATTTTTTTTACAACTCAATCAACTTTCCCCATTGTGTCTACAGCGGCTGGAGATCTCAACAGCATCAGAGAAGCTTATCGAGTGTCAGGAGACAATCCTAAACCTGGGAAAGCAACTGAAAGCACTTGCATCTCCAAAGGATGCGATCCTTTTCGACAAAGTGGTTCATACAAAAATTCAGTCTGAGCGAAAACCCCGGTCTCAGTCGCTAAACGAGATGCTAGCCATGGATGATGGAGGATTCGATTACCTCAGCTCCCCCAAAACCAAGGAGATCATATGCGCGGAACTAAGATCGCGGCATGAAAGAAGTTGCTCTGTCGACAACGGAGGCGATGATTCAGTAACATGCAGTTCCCACCCAATGCCGGTGGCACCACCAATGAGGCCCTACGATGTGAATGGAACTTGCAAGGATGAGGCTGCTCTCAAGGTAGTAGCACTTATGCCGAGCAAGCAGAAGGGGAACACCAACTTGCTGAAAAGGATTCTGGCAGGAAGGAGAAAGGAAGCCATGACCAAGCCAAATGTCGTTGCGACTGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017251