BGIOSGA017271

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Revision as of 04:42, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017271| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017271, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA017271

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017271, complete gene.

LocusTag

OSJNBB0022F16.14

Ensembl Transcript ID

BGIOSGA017271-TA

Ensembl Protein ID

BGIOSGA017271-PA

Length

6595

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32503457..32510051

Sequence Coding Region

32503457..32503745,32504785..32504875,32505714..32506071,32506186..32506359,32506819..32507023
,32507133..32507200,32507694..32507775,32507904..32507940,32508216..32508307
,32509613..32509688,32509793..32510051

Genome Context

<gbrowseImage1> name=IndicaChromosome04:32503457..32510051 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:32503457..32510051 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCCTCTTCAGGGCTCGCCGCCGGCGATCGCCGGAGGACGACAGCGAGGGGGAGGACGGATCCGCGTCCGGGCGGGTCACCCGCCGCCGCCTGTCGCCGGAGGAGGGCGCGCTGTCGCTGGCCGAGGCGTCGGCGTCGGTGGCCGCGGCGGGGGCGGGGGCGGAGAGTAGCCCCGGGTGGCTCTCCAGCATCGTGTCCGGAGCGAGGAGGGTGATCTCCTCGGTGTTGTTCTCCTCTCCCGAGGAGGCCGCCTCAGGGGAGGAGGAGGACGACGACGAGGAAGATGAAACAGAAGACAATCATGGAGCAATAGTTTCATACAATGAGTCAAAGCTTGCCATTGAGGAAATGGTTATGAAGGAGACATTCTCAAGGGATGAATGTGATAAAATGGTAAAGCTCATACAGTCACGAGTTACAGATGCTGCACTTCCTGAAGCACCTGAGTATGGAACGCCGAAAGAAATTCCAACCAGGAATACTGTTGTTGGAAATGATTTCACGGGAGCTTGGCGTTCCTTGAGTCGCCACAGAAATGGCACTGAACCAGTTCCATTCTCTAGTATTGGATCTGGTAGCTTTTCTCCTGGTTCTCCTCTCCATGCATCGCCCGAGCTATTAAGCGCAGCAGTTATGGAAGCAAAGAAATGGTTAGAAGAGAAAAGGCAGGGATTAGGTTCAAAGCCTGAAGACCATGGACCTTGCACATTAAACACTGATATGCTTAACTCTGGGTTTGAATCTGACATGGGTTCTCCAGTTGATTTAGCAAAATCATACATGCAGTCATTGCCTCCTTGGCAATCTCCATTCTTAGGTAGCCAGAAGTTTAAAACACCACCCTCTGCTGGATTACATATGTATGATTATGAAGGGAAGTCCAAATATTCTGTCCCCTCATCAAAGGTCACCACCAAGGAAGAATATCTTTCCAATTTTTGGGAAAATTTGGAGGAATCTCGTAGGTCTCGCCTGGGATCATCTGGAAGTTCTCCAGATGCTTCTAAAGTCAGGCAGTATGGTTCTACTTCCAGATTGTTTGAAAATGATACATCTATATTCTCATCGGGTACTGATAAGAAAGTTGACAAACCTGAGCAAAATAATAAAGGTTCTGATAAGGTTGCAGGAGCAGAACCGGCTAATGGGCACTCCTCACCTATCACTGATAAAAATCATGTGTTTGTTGATCCTGTGGACCCTGCAAATGACATAGGGAATGTTGTCAAAGAATGCAATGCTGCATCCAAAGTTCATATAGAGGAGATATCACAGGGGAACCAAATGTCTTCCACAAGTGTTACAAAGGATGCTGACCATGATGGGGATGTTAAAGCTCCTGTTGCAGAACCGGAAATTCACATGGAGTCAGATATAAACTCAGCGTCAGAGTTGAGAACAAAGGATACAGGTCCCCACATCCATGCGAGCTTAAATGGGTCGACCAAAAAAACTTCTGCCAATGGCCTTCGGGATCAATCAAATGCCAACTCGGGGGTAGAATCTTCGGGCAATGATAATCCCAGTTGCACCAACTCGAGCACCGGTGTGCCTCCCACCAGTAACGAGGTTAATGATCCTAAAGCTGATGCTGCAGATGGTGATTCTGTGGAGAATGGCACACGATTGAATTCAGAAGAACCTGCGCAGGTAGACCCAAAACCAGCCTACGTTCGGCGAGGACGGAAAAGGGTGGTCCGAGGCACGAGAGGAAGAGCAAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MASLFRARRRRSPEDDSEGEDGSASGRVTRRRLSPEEGALSLAEASASVAAAGAGAESSPGWLSSIVSGARRVISSVLFSSPEEAASGEEEDDDEEDETEDNHGAIVSYNESKLAIEEMVMKETFSRDECDKMVKLIQSRVTDAALPEAPEYGTPKEIPTRNTVVGNDFTGAWRSLSRHRNGTEPVPFSSIGSGSFSPGSPLHASPELLSAAVMEAKKWLEEKRQGLGSKPEDHGPCTLNTDMLNSGFESDMGSPVDLAKSYMQSLPPWQSPFLGSQKFKTPPSAGLHMYDYEGKSKYSVPSSKVTTKEEYLSNFWENLEESRRSRLGSSGSSPDASKVRQYGSTSRLFENDTSIFSSGTDKKVDKPEQNNKGSDKVAGAEPANGHSSPITDKNHVFVDPVDPANDIGNVVKECNAASKVHIEEISQGNQMSSTSVTKDADHDGDVKAPVAEPEIHMESDINSASELRTKDTGPHIHASLNGSTKKTSANGLRDQSNANSGVESSGNDNPSCTNSSTGVPPTSNEVNDPKADAADGDSVENGTRLNSEEPAQVDPKPAYVRRGRKRVVRGTRGRAK</aaseq>

Gene Sequence

<dnaseqindica>1..289#1329..1419#2258..2615#2730..2903#3363..3567#3677..3744#4238..4319#4448..4484#4760..4851#6157..6232#6337..6595#ATGGCGTCCCTCTTCAGGGCTCGCCGCCGGCGATCGCCGGAGGACGACAGCGAGGGGGAGGACGGATCCGCGTCCGGGCGGGTCACCCGCCGCCGCCTGTCGCCGGAGGAGGGCGCGCTGTCGCTGGCCGAGGCGTCGGCGTCGGTGGCCGCGGCGGGGGCGGGGGCGGAGAGTAGCCCCGGGTGGCTCTCCAGCATCGTGTCCGGAGCGAGGAGGGTGATCTCCTCGGTGTTGTTCTCCTCTCCCGAGGAGGCCGCCTCAGGGGAGGAGGAGGACGACGACGAGGAAGGTACTCCTTGAGCGCCGTGGAGTAGCCACGCTGTTCCTCATTTCAGATTTCTGTTTGTCACTCTCTCCTTGCTTGCTTCACTGAGCTGTTTCGTCTACTTGACCGCCCGAGTTGTGCCGCTGCGGTTACTTGCGCTGTTGGGTGCTAATTACGTCTTCGCTGCAAAGCTAGGGTTTCGGCTTACTTGCTCTAATTAGAGTAGAAGTAGTGGAATTTTGATAATTCGGGGTCAGTAGCAGAGAGAGAGTGTGCGCTGACGGTTTTTTCCCTTAGTAGACTGTGGTTGGGTAAGAATTTTGCGGTTTTGCCACATTAGGTGGAATTGGGGATAAGCTTGGTTTGACTCCAATTACACAGTCCTAGTGTTGTGGAATTAGAATTTGAAGTTTACAATGTGGAGTGCTCCGGCTGCTGTATTCATCAATCGATGCTTCAGCAGCATCACACTTCCATTTGGTATGCTTGCGAAGATACCATCATTGATTCATCAACACAAAATTAAAGGCATGTATTTGGTTAGCTGCCACCATCCTAAGGTTTATAATGTCCTGAAAATTATGATACGAGGTGCAGAGGGCTTAATTTAGATCTGGCATGGTTGTTTTCAGAATCAACCTCATTTGGGAACCACAGTTACTTGCATGAACATCGAGTTAGGATGACATGGTGCATATTATTGGAATTCAGAAAATAATTGAGCCATCTTTTGTCACATATGCTAGATATTTCCAGAATGTAGAATAGTTGAGCTATTTGTTATTGACCTGTTAGTTCTATTGTGGTTTGAGAAGGTGCTCGATCTTTAGCTTTGTAATGGTGGACAGCACTTTTAATTGACCTTAGACCATTTTAGAGGGATGCCCTGCAGACTAATCAGTGTTTTGTACTTTTGCATATGAAGGAACAGTGTTTCCAATTCTGTTGAGCCATTTTACCTTTCGTAAACTGTTCGCTCACACAACTACATTGTGCTGCCCACATTCAGATGAACTATTTTTGGGATGGTTTATGAGTGCGCTCATTTGTAATACCTGTGCAGATGAAACAGAAGACAATCATGGAGCAATAGTTTCATACAATGAGTCAAAGCTTGCCATTGAGGAAATGGTTATGAAGGAGACATTCTCAAGGTAACTGTAATGCTATTGTTCTTTACATGTGTGCTTAGATGTATATTTTTTTCCCTGGACAACTGCTAACAATTAAATTTAACAGTAAAGAAATCTAGTTTATTTCTCATTTACAAAACAGTTCTGATAATACAAGCATAGGTGCATATGGCCTAAGTTGGAGCTACTCTTCTTTTGATTTTTTGTACTATGAATTCTATAGGGTACTATGAATTAAAAGGGTAAAACTATTCAAATTTGAGTTGGAGAAGGAATCAAAGTCATGATATTATTGCAACTGGATAAGATAGACACTCTGTAGCAGTAGGATGAGGAAAATTGCACTTCAAAGTACTAAGCATGCAATTCTGCCTGTGGTGTGTGCTGCCGAGATACTGAGAATTTTATGTTGAATAGATCCATACATATTCTACGTTTTCTTAAACAGAGTAAATTTCACAGAACTGCAATTATTTTGTCAAAACTATCACTTTGCTACAACTTTAACTGCTATATCACAAAACCGCAATCATACCAAACAACTTTATCACAAAGCAGCAACACCGTTATGTGTGTATGACATGTGGGCCTGACTTACCAGCATGAATATTGCATGGGTGTGACAGGTGGGCCAAAAATTTGTTGGACAAATAAAGTTGCAGCTTTCTGATAAAATCCTTTATTATAGTTGCAGTTCTCTGAAATGCCTAGCTAAAGGTGCACATGGTTGCATGAGTATTGCATGTTACAGTAAACTGATAATTTTGGCAAAATAGTTGTAGTTATCTGAAATTTACTCTAAATAAAATCCTTATAACCTATTACTTTCCTTCTCAATTATTCATGTTTATTTTTATAGGGATGAATGTGATAAAATGGTAAAGCTCATACAGTCACGAGTTACAGATGCTGCACTTCCTGAAGCACCTGAGTATGGAACGCCGAAAGAAATTCCAACCAGGAATACTGTTGTTGGAAATGATTTCACGGGAGCTTGGCGTTCCTTGAGTCGCCACAGAAATGGCACTGAACCAGTTCCATTCTCTAGTATTGGATCTGGTAGCTTTTCTCCTGGTTCTCCTCTCCATGCATCGCCCGAGCTATTAAGCGCAGCAGTTATGGAAGCAAAGAAATGGTTAGAAGAGAAAAGGCAGGGATTAGGTTCAAAGCCTGAAGACCATGGACCTTGCACATTAAACACTGATATGCTTAACTCTGTTAGTATTAATGTGTTTTCATTCTCATCTTTATAGCCATCAATCTTTATGTGCTTGTCACAGCAATATTTGGTTCCTTTGTTGACTTACCTTTATGAGTTTTCATTTTTGCAGGGGTTTGAATCTGACATGGGTTCTCCAGTTGATTTAGCAAAATCATACATGCAGTCATTGCCTCCTTGGCAATCTCCATTCTTAGGTAGCCAGAAGTTTAAAACACCACCCTCTGCTGGATTACATATGTATGATTATGAAGGGAAGTCCAAATATTCTGTCCCCTCATCAAAGGTAATGCAAAGGTTAAAAGGCATTGGCAATTTAATTCTAGGTCCTTGATGTAAATGTGGGATGCATGATTGTCTTTGATTATTATATGTTGATTGATGCTTAGTTTCAGATAATGTCATTTGGTTCGGAGCTTGATGAACTTCAGTTTTTTTTTGGATATACTGTATCCCTTTTAGGTTTTTAGGAAATACTGTAAATATTGCTACATTGGCTGTCTTGATTCATATTCTGGAGTCTTGAGCTACTGTAGAATACGAGGTATTGAGAAAATGCTACTGGTCATGTATCATATATACTGCAGATATTTATAAAATTTCGGAACGGAATAAAATTAACTGAAAGTTAATGAATTTTTGGGGTCGCATGCCGCAGGCTTTTCTTTTATTAGTTAGTACCTACATGGTTATGTCAACTAAAATTGCATTTTCACTTCGTAATTATATGCTTTACCTTTTGAAGGTCACCACCAAGGAAGAATATCTTTCCAATTTTTGGGAAAATTTGGAGGAATCTCGTAGGTCTCGCCTGGGATCATCTGGAAGTTCTCCAGATGCTTCTAAAGTCAGGCAGTATGGTTCTACTTCCAGATTGTTTGAAAATGATACATCTATATTCTCATCGGGTACTGATAAGAAAGTTGACAAACCTGAGCAAAATAATAAAGGTGAGACTAATTTACTCACCTGAACTTTCCTTGACATGAATATTATGGATCATTTCTCATTCTTAGAAATTTTTGGCTTTGAAAAAATAATTTATTTCATATATTTTAGGTTCTGATAAGGTTGCAGGAGCAGAACCGGCTAATGGGCACTCCTCACCTATCACTGATAAAAATCATGTGAGTCATGGTAGTTTTTGTATTTATACATTTGACTAAGTTTGATATTGCTTATTGCTTCTGTTGTATGTTTTGCGAAAATTACTTTGACTTTCACCAGTTTGTGATATAAAATTGTTTGGCTGCCCTTCACGATGATGGGTCATTTACTCACCTGAACTTTGTAGAACTTCAAATATCTATGGAAGTAATTTAGATATATTGGAAAGAATGCTGCTATACGTACAAAAGGTTCTTACGAAACTCACAAACATAGTTCTCAACCGTTTGATTTAGCTAGATGGAAGTAATAGGAAAACTAGATATACTCACAGCATGCCATGTCAGCGTTTGTAAGAGTTTGGTAAGAAAAAAAAAAGTATGTATAGCATTATCTTATTGGACATTCTTATCTGTTTGTAAATATGAGTTCAAAATATTACTCTATAGTATGTTTTAAATATCACAAGTATCATTTCTTTATTTACCGGTGCAATTTTTCATCAATCTTAAGGTGTTTGTTGATCCTGTGGACCCTGCAAATGACATAGGGAATGTTGTCAAAGAATGCAATGCTGCATCCAAAGTTCATATAGGTAGACTCTCCTTTTCCTTCACTATTTGTTTGTGTTCTTTGATGACTTGTATAATTTTTGTATATGACTTAAATCAAAATTTACGCATATCCTGGACTAATTTACATGGGTTGTTGTTTATGGTGCAGAGGAGATATCACAGGGGAACCAAATGTCTTCCACAAGGTCAGCTTTTGCATTGAAAATGACTACTTACATTTGCTGCACTTGCAACATCTAGTTGTAAGCTTTGTGATTACATCACCAGCACAAATTGCTCTCAATATGTGCTGCGTTTCATTCTTAACCCTTATGTAGCCTGAACTTTTTTTTTTTTTTGAAATTGAACTTGTTTTTTTTGGGTCCTATGGAGATATTTTCTGTATGTTCATTTTGTCATTGAACACATGTTTCTTCAAATAGCCGGTTCCTCAAAGAAGATATTTGCTGTCTTGTCTCAGTGTTACAAAGGATGCTGACCATGATGGGGATGTTAAAGCTCCTGTTGCAGAACCGGAAATTCACATGGAGTCAGATATAAACTCAGCGTCAGGTTTGTGTGGTGTCCCTTTTCTGACATTAATTTTGCCATGGTTTGTGTGTTATTTCACTCATGTGCCTATGCATTTTATTCTTTTTGTTGAATCAGCTTGATTTTTCTTAACTCTGAACTTCCAATAAAATCTCTGTTGTTGCATGATCTGATGTAGTTGGAGAAGTTCCTTTTACTCTTGTTACTCCTTTGTTGTTTGAATCATGTTCGTCTGCTCCAGTGCAATAATTTTGTAACTTATAGAGACCAAGCTGATATTGTGTAATTTGTTTTATGCCCTGAAAATGATCACAACCCATGATTTTATTAGGTTTTGGAGCTCCAAGGTGTTGGATACTAATGGCAACTGTATTTCCTAGTCAGTCACTACATTTTATAAACCACATGTTCTGGGTATAATTTCAGATTTTATTAACTTTTGCGGCAGCAAGGAGCTGCCGATGTAGCGTCCTGGTTTGTAACCTGTAGCTGTCATTTGCCAGTGTGTTCCTGTGTGGTCCAGTTGCATGGGATCGTATTGGTTGGCTTTCGTTGCAACATGTAGCTTATAACTCTTTTCCCAAGCTTAATAAAATTCGTCCGGCATATGCTGGCCCGACGAGATGCAATTAAATTTTGGTCAATCTATCAAGTAGGCGACATATGACTACTGCTCCTACCTAAGGTCGGAATCTAACAGCTTCCTTTTTAAGGAATAAGGAAGACAAATATTGTAGCTAACTAGTAAACAACGGTTTGGGAAGGACTGGATTTTGCCTAATTAGAGAGAAATCCTACCTAATCAAACAGGCTTGTCTGCAATTATGGTTGATTTGCATAAAAGAAAAGCAGAAAAAAGTGCTATTTGTGGTTAGTACTTCGTCAATTTCGATTGCACAAATGGTTTTGTTCTTCAAGATTTCCATCTGAGTTAAACTGTGGCATAGGTTAGAAAAACAAAATTGCCTGAATAGGTCCAGCAACCGGCCCAAATGACTTACAAGAGCACAGCTATGCTTTTTCTGAAGCTTTGGATGACAGTACAAACTATTGAGCATTGACCCAAGGGTATAATCCTTCAGGTCATATAACACCAAACACTCAGAACTACCGTAAATATGAATGAATTTTGTAACATCTCTTCTTGTTTTTGTTAGTTGAAGGCTTGAAATGTCTTATCTGATTCTATCACTTAAGCTAAAGCAGAAATTGTGCATATGATTCCTCTGTTTCTGACTTGATCTTAGTTTAGATGTTTTTCTCTCTAAGTTGAATGTAGTACCTACTATGCATGCTTATCGTGGTTTATTTTCAAACTTTCTTCAGAGTTGAGAACAAAGGATACAGGTCCCCACATCCATGCGAGCTTAAATGGGTCGACCAAAAAAACTTCTGCCAATGGGTAACATAATGTGCACAAGCCACTTATATTTCAAGTGCAGAAGTTTTTTTTTGTTGTTGTTTTGGACTGACATGTTTGGCATTCGTCTGTTTCCTCTACTGCAGCCTTCGGGATCAATCAAATGCCAACTCGGGGGTAGAATCTTCGGGCAATGATAATCCCAGTTGCACCAACTCGAGCACCGGTGTGCCTCCCACCAGTAACGAGGTTAATGATCCTAAAGCTGATGCTGCAGATGGTGATTCTGTGGAGAATGGCACACGATTGAATTCAGAAGAACCTGCGCAGGTAGACCCAAAACCAGCCTACGTTCGGCGAGGACGGAAAAGGGTGGTCCGAGGCACGAGAGGAAGAGCAAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017271