BGIOSGA017298

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Revision as of 04:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017298| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017298, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017298

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017298, complete gene.

LocusTag

OSJNBA0084K01.2

Ensembl Transcript ID

BGIOSGA017298-TA

Ensembl Protein ID

BGIOSGA017298-PA

Length

3837

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32848897..32852733

Sequence Coding Region

32848897..32849061,32849143..32849269,32849341..32849471,32849825..32849926,32850009..32850092
,32850176..32850403,32850606..32850793,32850895..32850999,32851080..32851403
,32851818..32851975,32852071..32852177,32852380..32852436,32852524..32852733

Genome Context

<gbrowseImage1> name=IndicaChromosome04:32848897..32852733 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:32848897..32852733 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTGCAGGTGGAGGAGGCGCTGGCGGCCGTGCTGTCCGCGGCGGCGGCGAGCGCGGCGGCGCGCGCCGCCGAGGCCGTGCCGCTGCACGACGCGCTCGGGCTCGTCCTCGCGGAGGACGTCCGCGCGCCCGACCCCCTCCCTCCCTTCCGCGCCTCCATCAAGGATGGGTACGCCGTCGTGGCCTCCGACGGGCCCGGGGAGTACCCGGTGATTACGGAGTCGAGGGCCGGCGACGACGCCCTCGGCGTGGTCGTCACCCCCGGCACGGTGGCGTATGTCACGACCGGAGGGCCGATTCCGGATGGTGCTGACGCCGTCGTGCAAGTGGAGGACACGGAGCAGCTCGCCGGCGCGCCGGATGGGTCGAAGAGGGTTAGGATATTGGTGCGGCCAACTCAGGGGCAGGATATACGCAATGTGGGATGTGACATACAAAAGGATTCGGTAGTGCTGAAGTCTAGTGAGCACATAGGTCCTGCAGAAATTGGGTTACTTGCAACCGTGGGAGTGACTACTGTCAAGGTATATCGTCGACCAACCATTGCTGTATTTTCTACAGGGGATGAATTAGTGGAGCCAGCCACAGCATCTCTCAGTCGTGGTCAGATTCGTGATTCCAACCGGGCTATGTTAATTGCTGCTGCTATTCAGCACAAGTGCAAGGTAGTTGACTTGGGTATTGCAAAAGACACTGAGGAAAGTCTTAAGGAGCATATGGATGCAGCTCTAAGTTCTGATGCTGATATCATTCTTACTTCTGGTGGTGTTTCCATGGGCGATAGGGATCTTGTCAAACCTTGTTTGGCAAGCATGGGGAAAATTCACTTTGAAAAGATTCGGATGAAACCAGGGAAACCATTAACATTTGCTGAGATCGTAACAGAAGATTCATCAAAACCATCTAAAAAGGTTCTTGCATTTGGGTTGCCTGGAAACCCAGTGAGTTGTGTTGTTTGCTTCAATCTCTTTGTTGTTCCTGCAATACGTTCACTCTCTGGCTGGTCAAATCCTCATCTACCAAGAGTGCACGCACGTCTACTGCATCCTTTAAGAGGAGACCCACATCGTCAAGAGTTCCATCGTGCAGTGATCAGATGGGTGCCTGATGATGGATCTGGTAGACCTGGATATGTTGCTGAAAGCACGGGCCAACAAGCTAGTAGCCGCCTCCTAAGTATGAAATCTGCGAATGCTTTACTGGAAGTACCATTAGTGGGGCAGATGTTGGAGGCTGGAACATCTATGCAAGCTATACTTATTTCTGATATGACCAGTTCACCTTTTGACAAGCTACCCACTGCTTCAAATCCGTTGCCATCTCATTTATTTCCTTCTGCAAAAAGTGTTTCCACAGATTTGTCTCAGGTTCCAGCCTCACAGAATACTGAAGTTAAAGTAGCAATTCTGACAGTGAGCGACACTGTTTCATTGGGTGCAGGCCCTGACAGGAGTGGGCCAAGGGCAATATCTGTAGTGAATTCTTCATCAGAGAAATTGGGTGGAGCGACTGTTGTTGCTACTGCTGTTGTTCCAGACGATGTGGAAAAAATCAAGAACATTTTGGTGAAGTGGAGTGACATTGATCGTGTCAGCCTCATCTTGACACTAGGTGGTACTGGTTTCACACCTAGAGATGTCACACCAGAGGCAACAAAATCTGTCATAGAGAAAGAAGCACCTGGCCTCACATATGTCATGCTTCAGGAAAGTTTGAAGGTGACACCATTCGCAATGCTATCTAGAGCCACTGCGGGGATCAGAGGATCAACACTTATCATCAACATGCCCGGGAACCCGAACGCCGTTGCGGAGTGCATGGAGGCGCTTCTTCCAGCACTGAAACACGCCCTGAAGCAGATAAAGGGTGATAAGAGGGAGAAGCACCCGCGCCATGTCCCTCACGCTGAAGCTGCGCCTGTGGACCAGTGGGATCGGAGTTTCCGAGCCGCGTCGTCCGGCAGGGGATGCTCGTGCGAGCCATGA</cdnaseq>

Protein Sequence

<aaseq>MLQVEEALAAVLSAAAASAAARAAEAVPLHDALGLVLAEDVRAPDPLPPFRASIKDGYAVVASDGPGEYPVITESRAGDDALGVVVTPGTVAYVTTGGPIPDGADAVVQVEDTEQLAGAPDGSKRVRILVRPTQGQDIRNVGCDIQKDSVVLKSSEHIGPAEIGLLATVGVTTVKVYRRPTIAVFSTGDELVEPATASLSRGQIRDSNRAMLIAAAIQHKCKVVDLGIAKDTEESLKEHMDAALSSDADIILTSGGVSMGDRDLVKPCLASMGKIHFEKIRMKPGKPLTFAEIVTEDSSKPSKKVLAFGLPGNPVSCVVCFNLFVVPAIRSLSGWSNPHLPRVHARLLHPLRGDPHRQEFHRAVIRWVPDDGSGRPGYVAESTGQQASSRLLSMKSANALLEVPLVGQMLEAGTSMQAILISDMTSSPFDKLPTASNPLPSHLFPSAKSVSTDLSQVPASQNTEVKVAILTVSDTVSLGAGPDRSGPRAISVVNSSSEKLGGATVVATAVVPDDVEKIKNILVKWSDIDRVSLILTLGGTGFTPRDVTPEATKSVIEKEAPGLTYVMLQESLKVTPFAMLSRATAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKREKHPRHVPHAEAAPVDQWDRSFRAASSGRGCSCEP</aaseq>

Gene Sequence

<dnaseqindica>1..165#247..373#445..575#929..1030#1113..1196#1280..1507#1710..1897#1999..2103#2184..2507#2922..3079#3175..3281#3484..3540#3628..3837#ATGTTGCAGGTGGAGGAGGCGCTGGCGGCCGTGCTGTCCGCGGCGGCGGCGAGCGCGGCGGCGCGCGCCGCCGAGGCCGTGCCGCTGCACGACGCGCTCGGGCTCGTCCTCGCGGAGGACGTCCGCGCGCCCGACCCCCTCCCTCCCTTCCGCGCCTCCATCAAGGTCAACACCTTCCTCCCCCTCTCTTCTGCTCCCCCTCCTTGCCGCCGCGCCTGAGGGTGCTTGGGTTGAAACCCTCTGCAGGATGGGTACGCCGTCGTGGCCTCCGACGGGCCCGGGGAGTACCCGGTGATTACGGAGTCGAGGGCCGGCGACGACGCCCTCGGCGTGGTCGTCACCCCCGGCACGGTGGCGTATGTCACGACCGGAGGTGAGGTGGCTCGCGCTGTTCCTTCCGATGATGCGGTGGTGATCGGTTACTGACCGTGGTTTCTCGGGCAGGGCCGATTCCGGATGGTGCTGACGCCGTCGTGCAAGTGGAGGACACGGAGCAGCTCGCCGGCGCGCCGGATGGGTCGAAGAGGGTTAGGATATTGGTGCGGCCAACTCAGGGGCAGGATATACGCAATGTGGTATTGCTAATAGGTTTCATTGCTTTGCTTAATGCTTATCCTTACTTGCTTTATTCCCTCCTACTTGCGTTTGTGCGACGATTTGATTGAAACAAAAAAGCTACTATCCATGCTCTGCTCTTCTGCTATGTCAATTGCATCTTAATTCAGTTTAAATTGTTGATGTATTTGAGTGGATTTACTTGTTTATGTCCTTCAGTGGAAGCAACATTCTTGTTTGTTATTATTGCGCTATTAGCTGTGTACTGTAGTTCTCAATTACTATGTACTTCTATAGTTCATGCAGAGCATTTGGTACAGTATTACTTCATCTGGTAACTGATGAGTTAGTTATTTGAATAAATAATCCATAGGGATGTGACATACAAAAGGATTCGGTAGTGCTGAAGTCTAGTGAGCACATAGGTCCTGCAGAAATTGGGTTACTTGCAACCGTGGGAGTGACTACTGTCAAGGTGAATAAGTCTTTCAGTTACCCTGTCACTGAGTGCAGAAGAGAATCTCGCACAACTGATCATTTTGAGTATGAATCTGCAGGTATATCGTCGACCAACCATTGCTGTATTTTCTACAGGGGATGAATTAGTGGAGCCAGCCACAGCATCTCTCAGTCGTGGTCAGGTTATTCCCACTATTTCACAATGTTTGCATCCCTCACCTTTATCTGCATTTCATATTCACCGAAATGTGTACTTGCTTTGCAGATTCGTGATTCCAACCGGGCTATGTTAATTGCTGCTGCTATTCAGCACAAGTGCAAGGTAGTTGACTTGGGTATTGCAAAAGACACTGAGGAAAGTCTTAAGGAGCATATGGATGCAGCTCTAAGTTCTGATGCTGATATCATTCTTACTTCTGGTGGTGTTTCCATGGGCGATAGGGATCTTGTCAAACCTTGTTTGGCAAGCATGGGGAAAATTCACTTTGAAAAGGTATCTTGGAAATTCCTCCAAAATTAGGCGTGCACCATGCAGTTGTATGGAAGTACAAACCAGGAGTTATGATATGCTTTTCTTGTTTCCAGCTGGATAACCAATTAAAACAGTTATTGATGGAAAATTCTTTTAGTCTTTGGCACTAATATATTTGTACAATTCCAGTAATTCTAACAGTTTGCTGTGTTTGCATGTACAGATTCGGATGAAACCAGGGAAACCATTAACATTTGCTGAGATCGTAACAGAAGATTCATCAAAACCATCTAAAAAGGTTCTTGCATTTGGGTTGCCTGGAAACCCAGTGAGTTGTGTTGTTTGCTTCAATCTCTTTGTTGTTCCTGCAATACGTTCACTCTCTGGCTGGTCAAATCCTCATCTACCAAGGTAGTTATTGTCATGCATAAGTGGTTAGCATTGTTATTAAGTTCTTTATTCCCATTATATATCATTGAGCATATTGTCTTCACTGACATGACTTTCTACAGAGTGCACGCACGTCTACTGCATCCTTTAAGAGGAGACCCACATCGTCAAGAGTTCCATCGTGCAGTGATCAGATGGGTGCCTGATGATGGATCTGGTAGACCTGGGTAAGAGCTATATTTTAATATGATGCCTTATATTTGGCAATACTGTAGGTGATACCGGCTGATGAAATTGGTCTTGGCAGATATGTTGCTGAAAGCACGGGCCAACAAGCTAGTAGCCGCCTCCTAAGTATGAAATCTGCGAATGCTTTACTGGAAGTACCATTAGTGGGGCAGATGTTGGAGGCTGGAACATCTATGCAAGCTATACTTATTTCTGATATGACCAGTTCACCTTTTGACAAGCTACCCACTGCTTCAAATCCGTTGCCATCTCATTTATTTCCTTCTGCAAAAAGTGTTTCCACAGATTTGTCTCAGGTTCCAGCCTCACAGAATACTGAAGTTAAAGTAGCAATTCTGACAGTGAGCGACACTGTTTCATTGGGTGCAGGCCCTGACAGGAGGTATTTCGTTAAGCGCCTTTTTCCTCGTGATTGTTGCTGAAAAGCTGCTGTACTTTTGCTTGTGATTGGGTTCCAGATTGAATCAGAAAAGATAATGAACCAATATAAAGTCTTACCTTTTGAAGTGCACGCATCCTGATACACCTCTTTGTGTTGAGTTGCAAAGGGGTCACACCATGATGCAAAACTAAAGAGTCGAATTACTGTTTTTTCTTCACATAAGATGGTGATGCATCTCAGTAAGGGCTCCACATTTCACAAGGCTGTTATTTTTTCCATCGGAACAGTGGATCAACCAAAAGCTTTAATTCCTTATGCTGTCAGCTTAGCATTTTTATAAAACACATGTGACTACTTTTTCATGAATACTTAAATCACTGTTGTTTCTTCTCTGTAATACAATATCATCTGTAGTGGGCCAAGGGCAATATCTGTAGTGAATTCTTCATCAGAGAAATTGGGTGGAGCGACTGTTGTTGCTACTGCTGTTGTTCCAGACGATGTGGAAAAAATCAAGAACATTTTGGTGAAGTGGAGTGACATTGATCGTGTCAGCCTCATCTTGACACTAGGTGAAAATGTTTTCATTCTTTAAGTTAGCAAATTGCACAATCCTTATTTTTACAGTGAGATGAGCATCAACTTCCTTTTTATAACGGATATGCAGGTGGTACTGGTTTCACACCTAGAGATGTCACACCAGAGGCAACAAAATCTGTCATAGAGAAAGAAGCACCTGGCCTCACATATGTCATGCTTCAGGAAAGTTTGAAGGTGATGACTGACATTTTTCTATATCCCCTTGTTCTTTGGTTTAACATGGAAATCCATTATCATCAACTTTTTCTAGAGATAAGAGATAACAACTAACCATGCATATGACACTAGGGCTAAACTTTAGTGGCATTTCATTTCAATAGATTTTAGTACCCTAACTTTCATTTAATCTGAGCTATTGAACTTATCTGTGGTACAGGTGACACCATTCGCAATGCTATCTAGAGCCACTGCGGGGATCAGAGGATCAACACTTGTACACACCATAGCTCAAACTTGGCAATTTCTCACCTCACTCTGAAACGTTCACATGTTTATCAAACCTGTTGATATATCTTTTCAGATCATCAACATGCCCGGGAACCCGAACGCCGTTGCGGAGTGCATGGAGGCGCTTCTTCCAGCACTGAAACACGCCCTGAAGCAGATAAAGGGTGATAAGAGGGAGAAGCACCCGCGCCATGTCCCTCACGCTGAAGCTGCGCCTGTGGACCAGTGGGATCGGAGTTTCCGAGCCGCGTCGTCCGGCAGGGGATGCTCGTGCGAGCCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017298

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